FFCP PHASE1:Mm9::chr2:170253353..170253362,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=76960|HGNC=|MCL_coexpression_id=306|UniProt=A2AVX1,E9Q8Q5,Q80YN3,Q14CE2|association_with_transcript=-8bp_to_ENSMUST00000068137,ENSMUST00000109152,ENSMUST00000145920,NM_001164369,NM_029815,uc008oby.2,uc008obz.2_5end|description=CAGE_peak_5_at_Bcas1_5end|id=chr2:170253353..170253362,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.55e-15!59;UBERON:0001007!6.05e-14!128;UBERON:0001555!6.05e-14!128;UBERON:0007026!6.05e-14!128;UBERON:0004119!1.68e-13!130;UBERON:0000925!1.68e-13!130;UBERON:0006595!1.68e-13!130;UBERON:0004921!1.75e-12!126;UBERON:0004185!1.75e-12!126;UBERON:0000160!4.42e-11!43|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.72e-27,47;UBERON:0000160,2.74e-19,31;UBERON:0001007,5.61e-13,116;UBERON:0001555,5.61e-13,116;UBERON:0007026,5.61e-13,116;UBERON:0004119,1.07e-12,118;UBERON:0000925,1.07e-12,118;UBERON:0006595,1.07e-12,118;UBERON:0004921,1.63e-10,114;UBERON:0002108,2.62e-09,4;UBERON:0001155,2.64e-09,2;UBERON:0000059,2.64e-09,2;UBERON:0000344,4.41e-09,15;UBERON:0000945,1.76e-08,16;UBERON:0010039,1.76e-08,16;UBERON:0001962,1.91e-08,2;UBERON:0001961,1.91e-08,2;UBERON:0001744,1.91e-08,2|phase1_expression=0,0,0,0,0.500895729946347,3.69334398206158,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.83527424853736,0.57423196411502,1.7230479846363,0.646413698057667,3.6104449696711,2.26827116783938,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.793351699990633,0,0.232236671860439,0.515469845288373,0.605050573870028,0.667134131534611,2.09248188723815,0.474529061544512,0.823494773620054,1.75934646160189,1.59165177632921,1.16978452271472,0,3.45820879799511,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,1.4470629585145,0.763877555344259,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.476087281772027,0,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.238744688006273,0.984845398470368,1.1659233465194,0,0,0,0,0,0,0,0,0,0,12.4107180341965,0,0.203319467126849,0.216010681643603,2.09088296014469,0.436725127492355,1.75323650300267,1.73572257023205,6.80565449158477,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.906921534460845,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.628839487883947,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0.565879024158229,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0|short_description=p5@Bcas1}} | ||
|EntrezGene=76960 | |||
|HGNC= | |||
|MCL_coexpression_id=306 | |||
|UniProt=A2AVX1,E9Q8Q5,Q80YN3,Q14CE2 | |||
|association_with_transcript=-8bp_to_ENSMUST00000068137,ENSMUST00000109152,ENSMUST00000145920,NM_001164369,NM_029815,uc008oby.2,uc008obz.2_5end | |||
|description=CAGE_peak_5_at_Bcas1_5end | |||
|id=chr2:170253353..170253362,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.55e-15!59;UBERON:0001007!6.05e-14!128;UBERON:0001555!6.05e-14!128;UBERON:0007026!6.05e-14!128;UBERON:0004119!1.68e-13!130;UBERON:0000925!1.68e-13!130;UBERON:0006595!1.68e-13!130;UBERON:0004921!1.75e-12!126;UBERON:0004185!1.75e-12!126;UBERON:0000160!4.42e-11!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.72e-27,47;UBERON:0000160,2.74e-19,31;UBERON:0001007,5.61e-13,116;UBERON:0001555,5.61e-13,116;UBERON:0007026,5.61e-13,116;UBERON:0004119,1.07e-12,118;UBERON:0000925,1.07e-12,118;UBERON:0006595,1.07e-12,118;UBERON:0004921,1.63e-10,114;UBERON:0002108,2.62e-09,4;UBERON:0001155,2.64e-09,2;UBERON:0000059,2.64e-09,2;UBERON:0000344,4.41e-09,15;UBERON:0000945,1.76e-08,16;UBERON:0010039,1.76e-08,16;UBERON:0001962,1.91e-08,2;UBERON:0001961,1.91e-08,2;UBERON:0001744,1.91e-08,2 | |||
|phase1_expression=0,0,0,0,0.500895729946347,3.69334398206158,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.83527424853736,0.57423196411502,1.7230479846363,0.646413698057667,3.6104449696711,2.26827116783938,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.793351699990633,0,0.232236671860439,0.515469845288373,0.605050573870028,0.667134131534611,2.09248188723815,0.474529061544512,0.823494773620054,1.75934646160189,1.59165177632921,1.16978452271472,0,3.45820879799511,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,1.4470629585145,0.763877555344259,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.476087281772027,0,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.238744688006273,0.984845398470368,1.1659233465194,0,0,0,0,0,0,0,0,0,0,12.4107180341965,0,0.203319467126849,0.216010681643603,2.09088296014469,0.436725127492355,1.75323650300267,1.73572257023205,6.80565449158477,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.906921534460845,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.628839487883947,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0.565879024158229,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Bcas1 | |||
}} |
Revision as of 23:03, 13 September 2013
Short description: | p5@Bcas1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bcas1_5end |
Coexpression cluster: | MCL_coexpression_mm9:306 |
Association with transcript: | -8bp_to_ENSMUST00000068137, ENSMUST00000109152, ENSMUST00000145920, NM_001164369, NM_029815, uc008oby.2, uc008obz.2_5end |
EntrezGene: | Bcas1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.72e-27 | 47 |
intestine | 2.74e-19 | 31 |
digestive system | 5.61e-13 | 116 |
digestive tract | 5.61e-13 | 116 |
primitive gut | 5.61e-13 | 116 |
endoderm-derived structure | 1.07e-12 | 118 |
endoderm | 1.07e-12 | 118 |
presumptive endoderm | 1.07e-12 | 118 |
subdivision of digestive tract | 1.63e-10 | 114 |
small intestine | 2.62e-09 | 4 |
colon | 2.64e-09 | 2 |
large intestine | 2.64e-09 | 2 |
mucosa | 4.41e-09 | 15 |
stomach | 1.76e-08 | 16 |
food storage organ | 1.76e-08 | 16 |
gut-associated lymphoid tissue | 1.91e-08 | 2 |
mucosa-associated lymphoid tissue | 1.91e-08 | 2 |
lymphoid tissue | 1.91e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.