FFCP PHASE1:Mm9::chr7:25763366..25763383,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:25763366..25763383,-|id=chr7:25763366..25763383,-|ontology_enrichment_celltype=CL:0000117!1.13e-17!23;CL:0000337!1.13e-17!23;CL:0000540!4.65e-11!33;CL:0000047!4.65e-11!33;CL:0000031!4.65e-11!33;CL:0000404!4.65e-11!33;CL:0000393!2.92e-08!39;CL:0000211!2.92e-08!39;CL:0002319!7.17e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,8.22e-16,23;CL:0000337,8.22e-16,23;CL:0000540,6.36e-10,33;CL:0000047,6.36e-10,33;CL:0000031,6.36e-10,33;CL:0000404,6.36e-10,33;CL:0000393,7.28e-08,39;CL:0000211,7.28e-08,39;CL:0002610,2.56e-07,3;CL:0002614,7.45e-07,3;CL:0002319,8.03e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.26e-30!71;UBERON:0003075!6.26e-30!71;UBERON:0007284!6.26e-30!71;UBERON:0001049!8.92e-26!52;UBERON:0005068!8.92e-26!52;UBERON:0006241!8.92e-26!52;UBERON:0007135!8.92e-26!52;UBERON:0002020!3.26e-25!34;UBERON:0000955!3.44e-24!50;UBERON:0006238!3.44e-24!50;UBERON:0001017!4.21e-24!73;UBERON:0005743!4.21e-24!73;UBERON:0000033!1.46e-23!63;UBERON:0004121!2.21e-23!102;UBERON:0000924!2.21e-23!102;UBERON:0006601!2.21e-23!102;UBERON:0002616!3.40e-23!49;UBERON:0000073!5.28e-23!75;UBERON:0001016!5.28e-23!75;UBERON:0002791!2.47e-20!29;UBERON:0003528!2.47e-20!29;UBERON:0001893!2.47e-20!29;UBERON:0003056!1.33e-19!49;UBERON:0003080!1.12e-17!40;UBERON:0002780!8.88e-17!39;UBERON:0001890!8.88e-17!39;UBERON:0006240!8.88e-17!39;UBERON:0007811!2.28e-15!86;UBERON:0000956!1.20e-13!21;UBERON:0001869!1.20e-13!21;UBERON:0000203!1.20e-13!21;UBERON:0000153!8.95e-13!94;UBERON:0002619!1.39e-12!17;UBERON:0002021!3.99e-12!10;UBERON:0000411!3.99e-12!10;UBERON:0001950!3.99e-12!10;UBERON:0003076!8.94e-09!12;UBERON:0003057!8.94e-09!12;UBERON:0002420!5.89e-08!8;UBERON:0007245!5.89e-08!8;UBERON:0010009!5.89e-08!8;UBERON:0010011!5.89e-08!8;UBERON:0000454!5.89e-08!8;UBERON:0002298!2.47e-07!6;UBERON:0002240!4.57e-07!6;UBERON:0005174!4.57e-07!6;UBERON:0001137!4.57e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.23e-39,54;UBERON:0001049,1.32e-35,52;UBERON:0005068,1.32e-35,52;UBERON:0006241,1.32e-35,52;UBERON:0007135,1.32e-35,52;UBERON:0001017,1.45e-34,73;UBERON:0001016,2.12e-33,75;UBERON:0002020,1.42e-31,34;UBERON:0002346,3.94e-31,64;UBERON:0003075,3.94e-31,64;UBERON:0007284,3.94e-31,64;UBERON:0000955,8.77e-28,47;UBERON:0006238,8.77e-28,47;UBERON:0004121,1.76e-27,95;UBERON:0000924,1.76e-27,95;UBERON:0006601,1.76e-27,95;UBERON:0010371,3.12e-26,73;UBERON:0002616,3.35e-26,46;UBERON:0003528,1.98e-23,29;UBERON:0002791,1.98e-23,29;UBERON:0001893,1.98e-23,29;UBERON:0003080,2.67e-21,40;UBERON:0002021,8.54e-21,10;UBERON:0000411,8.54e-21,10;UBERON:0001950,8.54e-21,10;UBERON:0010314,2.21e-20,92;UBERON:0002780,7.35e-20,39;UBERON:0001890,7.35e-20,39;UBERON:0006240,7.35e-20,39;UBERON:0003056,1.65e-19,49;UBERON:0002619,6.85e-16,17;UBERON:0003076,1.57e-15,12;UBERON:0003057,1.57e-15,12;UBERON:0000956,2.03e-14,21;UBERON:0001869,2.03e-14,21;UBERON:0000203,2.03e-14,21;UBERON:0000025,9.06e-12,114;UBERON:0002240,1.36e-11,6;UBERON:0005174,1.36e-11,6;UBERON:0001137,1.36e-11,6;UBERON:0002420,1.57e-10,8;UBERON:0007245,1.57e-10,8;UBERON:0010009,1.57e-10,8;UBERON:0010011,1.57e-10,8;UBERON:0000454,1.57e-10,8;UBERON:0004111,1.80e-10,122;UBERON:0001948,6.63e-10,5;UBERON:0002315,6.63e-10,5;UBERON:0002950,1.45e-08,4;UBERON:0001891,1.45e-08,4;UBERON:0009616,1.45e-08,4;UBERON:0010286,1.45e-08,4;UBERON:0004684,2.56e-07,3;UBERON:0002275,2.56e-07,3;UBERON:0011216,2.85e-07,194;UBERON:0002038,7.45e-07,3;UBERON:0009663,7.45e-07,3;UBERON:0009661,7.45e-07,3;UBERON:0000125,7.45e-07,3;UBERON:0002308,7.45e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0.7104801149461,0,0,0,0.270011876663381,0.841299845405528,3.99911378165325,3.3130281142742,0.244981598429908,0.0958454710182364,0.919218786610021,6.60695285996332,8.17198963745201,6.91229399653096,1.05509030184155,1.18933936683133,0.52091337055676,4.74611098302348,3.93933827022176,7.63991238884051,8.2496003932627,4.9830088279686,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,1.41106448562846,0.125666591329675,0,0,0,0.161766849947409,0,0.969750506270444,0,5.5628351432194,31.4170060220183,0,0,0,0,4.49371918214468,2.28750301409313,1.25654352112864,3.30266208365325,3.58001640262463,4.1557608911912,2.27137768294861,0.101839363850316,0.248813941220186,0,1.05220927943237,0,0,0,0.150704817835715,0.340182495756639,0.896796041993948,0.562210347358373,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,4.81651769963376,4.80567915028033,0,0,0,0,0.215423397732799,0,0,0,0,0,0,4.81981974632711,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,10.1655331671072,8.28585425712918,12.0308057822273,16.6697586873377,5.48066015816514,8.3093328712867,3.37511250115903,6.75481804836331,4.07828168085784,8.28416498802912,0,1.19707462020309,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.588795680537589,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.859484216193193,0.765153328275374,0,0|short_description=p@chr7:25763366..25763383,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:25763366..25763383,- | |||
|id=chr7:25763366..25763383,- | |||
|ontology_enrichment_celltype=CL:0000117!1.13e-17!23;CL:0000337!1.13e-17!23;CL:0000540!4.65e-11!33;CL:0000047!4.65e-11!33;CL:0000031!4.65e-11!33;CL:0000404!4.65e-11!33;CL:0000393!2.92e-08!39;CL:0000211!2.92e-08!39;CL:0002319!7.17e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.22e-16,23;CL:0000337,8.22e-16,23;CL:0000540,6.36e-10,33;CL:0000047,6.36e-10,33;CL:0000031,6.36e-10,33;CL:0000404,6.36e-10,33;CL:0000393,7.28e-08,39;CL:0000211,7.28e-08,39;CL:0002610,2.56e-07,3;CL:0002614,7.45e-07,3;CL:0002319,8.03e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.26e-30!71;UBERON:0003075!6.26e-30!71;UBERON:0007284!6.26e-30!71;UBERON:0001049!8.92e-26!52;UBERON:0005068!8.92e-26!52;UBERON:0006241!8.92e-26!52;UBERON:0007135!8.92e-26!52;UBERON:0002020!3.26e-25!34;UBERON:0000955!3.44e-24!50;UBERON:0006238!3.44e-24!50;UBERON:0001017!4.21e-24!73;UBERON:0005743!4.21e-24!73;UBERON:0000033!1.46e-23!63;UBERON:0004121!2.21e-23!102;UBERON:0000924!2.21e-23!102;UBERON:0006601!2.21e-23!102;UBERON:0002616!3.40e-23!49;UBERON:0000073!5.28e-23!75;UBERON:0001016!5.28e-23!75;UBERON:0002791!2.47e-20!29;UBERON:0003528!2.47e-20!29;UBERON:0001893!2.47e-20!29;UBERON:0003056!1.33e-19!49;UBERON:0003080!1.12e-17!40;UBERON:0002780!8.88e-17!39;UBERON:0001890!8.88e-17!39;UBERON:0006240!8.88e-17!39;UBERON:0007811!2.28e-15!86;UBERON:0000956!1.20e-13!21;UBERON:0001869!1.20e-13!21;UBERON:0000203!1.20e-13!21;UBERON:0000153!8.95e-13!94;UBERON:0002619!1.39e-12!17;UBERON:0002021!3.99e-12!10;UBERON:0000411!3.99e-12!10;UBERON:0001950!3.99e-12!10;UBERON:0003076!8.94e-09!12;UBERON:0003057!8.94e-09!12;UBERON:0002420!5.89e-08!8;UBERON:0007245!5.89e-08!8;UBERON:0010009!5.89e-08!8;UBERON:0010011!5.89e-08!8;UBERON:0000454!5.89e-08!8;UBERON:0002298!2.47e-07!6;UBERON:0002240!4.57e-07!6;UBERON:0005174!4.57e-07!6;UBERON:0001137!4.57e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.23e-39,54;UBERON:0001049,1.32e-35,52;UBERON:0005068,1.32e-35,52;UBERON:0006241,1.32e-35,52;UBERON:0007135,1.32e-35,52;UBERON:0001017,1.45e-34,73;UBERON:0001016,2.12e-33,75;UBERON:0002020,1.42e-31,34;UBERON:0002346,3.94e-31,64;UBERON:0003075,3.94e-31,64;UBERON:0007284,3.94e-31,64;UBERON:0000955,8.77e-28,47;UBERON:0006238,8.77e-28,47;UBERON:0004121,1.76e-27,95;UBERON:0000924,1.76e-27,95;UBERON:0006601,1.76e-27,95;UBERON:0010371,3.12e-26,73;UBERON:0002616,3.35e-26,46;UBERON:0003528,1.98e-23,29;UBERON:0002791,1.98e-23,29;UBERON:0001893,1.98e-23,29;UBERON:0003080,2.67e-21,40;UBERON:0002021,8.54e-21,10;UBERON:0000411,8.54e-21,10;UBERON:0001950,8.54e-21,10;UBERON:0010314,2.21e-20,92;UBERON:0002780,7.35e-20,39;UBERON:0001890,7.35e-20,39;UBERON:0006240,7.35e-20,39;UBERON:0003056,1.65e-19,49;UBERON:0002619,6.85e-16,17;UBERON:0003076,1.57e-15,12;UBERON:0003057,1.57e-15,12;UBERON:0000956,2.03e-14,21;UBERON:0001869,2.03e-14,21;UBERON:0000203,2.03e-14,21;UBERON:0000025,9.06e-12,114;UBERON:0002240,1.36e-11,6;UBERON:0005174,1.36e-11,6;UBERON:0001137,1.36e-11,6;UBERON:0002420,1.57e-10,8;UBERON:0007245,1.57e-10,8;UBERON:0010009,1.57e-10,8;UBERON:0010011,1.57e-10,8;UBERON:0000454,1.57e-10,8;UBERON:0004111,1.80e-10,122;UBERON:0001948,6.63e-10,5;UBERON:0002315,6.63e-10,5;UBERON:0002950,1.45e-08,4;UBERON:0001891,1.45e-08,4;UBERON:0009616,1.45e-08,4;UBERON:0010286,1.45e-08,4;UBERON:0004684,2.56e-07,3;UBERON:0002275,2.56e-07,3;UBERON:0011216,2.85e-07,194;UBERON:0002038,7.45e-07,3;UBERON:0009663,7.45e-07,3;UBERON:0009661,7.45e-07,3;UBERON:0000125,7.45e-07,3;UBERON:0002308,7.45e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0.7104801149461,0,0,0,0.270011876663381,0.841299845405528,3.99911378165325,3.3130281142742,0.244981598429908,0.0958454710182364,0.919218786610021,6.60695285996332,8.17198963745201,6.91229399653096,1.05509030184155,1.18933936683133,0.52091337055676,4.74611098302348,3.93933827022176,7.63991238884051,8.2496003932627,4.9830088279686,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,1.41106448562846,0.125666591329675,0,0,0,0.161766849947409,0,0.969750506270444,0,5.5628351432194,31.4170060220183,0,0,0,0,4.49371918214468,2.28750301409313,1.25654352112864,3.30266208365325,3.58001640262463,4.1557608911912,2.27137768294861,0.101839363850316,0.248813941220186,0,1.05220927943237,0,0,0,0.150704817835715,0.340182495756639,0.896796041993948,0.562210347358373,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,4.81651769963376,4.80567915028033,0,0,0,0,0.215423397732799,0,0,0,0,0,0,4.81981974632711,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,10.1655331671072,8.28585425712918,12.0308057822273,16.6697586873377,5.48066015816514,8.3093328712867,3.37511250115903,6.75481804836331,4.07828168085784,8.28416498802912,0,1.19707462020309,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.588795680537589,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.859484216193193,0.765153328275374,0,0 | |||
|short_description=p@chr7:25763366..25763383,- | |||
}} |
Revision as of 12:50, 14 September 2013
Short description: | p@chr7:25763366..25763383, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25763366..25763383, - |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.22e-16 | 23 |
neuroblast (sensu Vertebrata) | 8.22e-16 | 23 |
neuron | 6.36e-10 | 33 |
neuronal stem cell | 6.36e-10 | 33 |
neuroblast | 6.36e-10 | 33 |
electrically signaling cell | 6.36e-10 | 33 |
electrically responsive cell | 7.28e-08 | 39 |
electrically active cell | 7.28e-08 | 39 |
raphe nuclei neuron | 2.56e-07 | 3 |
neuron of the substantia nigra | 7.45e-07 | 3 |
neural cell | 8.03e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.