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FFCP PHASE1:Mm9::chr12:112404696..112404731,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22031|HGNC=|MCL_coexpression_id=2768|UniProt=D3Z343|association_with_transcript=0bp_to_ENSMUST00000139162_5end|description=CAGE_peak_3_at_Traf3_5end|id=chr12:112404696..112404731,+|ontology_enrichment_celltype=CL:0000063!5.26e-08!66;CL:0000988!8.78e-08!32;CL:0002032!8.78e-08!32;CL:0000037!8.78e-08!32;CL:0000566!8.78e-08!32;CL:0000837!8.78e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.36e-09,32;CL:0002032,1.36e-09,32;CL:0000037,1.36e-09,32;CL:0000837,1.36e-09,32;CL:0002031,1.99e-08,25;CL:0002320,2.75e-07,46;CL:0000134,2.75e-07,46;CL:0000738,3.85e-07,17;CL:0002087,3.85e-07,17;CL:0000791,5.35e-07,9;CL:0000789,5.35e-07,9;CL:0002420,5.35e-07,9;CL:0002419,5.35e-07,9;CL:0000790,5.35e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.03e-15!48;UBERON:0002390!5.23e-13!45;UBERON:0003061!5.23e-13!45;UBERON:0000072!2.64e-09!27;UBERON:0002405!3.23e-09!70;UBERON:0003081!7.80e-09!88;UBERON:0004177!1.48e-08!29;UBERON:0003408!3.75e-08!24;UBERON:0002370!7.30e-08!23;UBERON:0000974!7.30e-08!23;UBERON:0004807!7.30e-08!23;UBERON:0005058!7.30e-08!23;UBERON:0003351!7.30e-08!23;UBERON:0009113!7.30e-08!23;UBERON:0003295!7.30e-08!23;UBERON:0009722!7.30e-08!23;UBERON:0005562!7.30e-08!23;UBERON:0007690!7.30e-08!23;UBERON:0006562!1.03e-07!24;UBERON:0001557!1.03e-07!24;UBERON:0001042!1.03e-07!24;UBERON:0008814!1.03e-07!24;UBERON:0009145!1.03e-07!24;UBERON:0000063!7.79e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.60e-17,48;UBERON:0002405,1.60e-17,48;UBERON:0002390,2.96e-15,45;UBERON:0003061,2.96e-15,45;UBERON:0000072,2.22e-11,27;UBERON:0003408,1.71e-10,24;UBERON:0002370,3.99e-10,23;UBERON:0000974,3.99e-10,23;UBERON:0004807,3.99e-10,23;UBERON:0005058,3.99e-10,23;UBERON:0003351,3.99e-10,23;UBERON:0009113,3.99e-10,23;UBERON:0003295,3.99e-10,23;UBERON:0009722,3.99e-10,23;UBERON:0005562,3.99e-10,23;UBERON:0007690,3.99e-10,23;UBERON:0003081,1.05e-09,87;UBERON:0004177,1.16e-09,29;UBERON:0005057,1.16e-09,29;UBERON:0006562,2.32e-09,24;UBERON:0001557,2.32e-09,24;UBERON:0001042,2.32e-09,24;UBERON:0008814,2.32e-09,24;UBERON:0009145,2.32e-09,24;UBERON:0000077,3.99e-09,35;UBERON:0001004,5.96e-08,42;UBERON:0000065,1.29e-07,41;UBERON:0002384,2.75e-07,46|phase1_expression=0.480446541314382,11.5161884520989,15.9249733786338,0.60492842261366,2.50447864973174,11.2479112180966,8.64366770203445,5.03580961422147,4.50523910885334,3.97909694747389,4.45166717386313,3.58974715479014,2.73921167889929,2.62261207256992,4.66353666541928,3.23960427823721,0.699561878128147,11.0411757875383,13.4372144933624,13.1560792057389,0.510259740906419,0.397163804803541,0.522399578277871,7.67963629408352,8.02932483735095,9.76194338995534,8.18447792702242,9.9116767035509,0.570070258369122,0.504060259519861,4.21287970245079,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0.837063261473815,0,1.0470474879476,1.17646297606203,2.73218193983378,1.94204141212461,2.14024590558481,2.73717714292689,1.65192076945513,0.782391344348039,0.65407546914134,0.878744730937887,1.55543919259427,0.139986421625363,0,12.5836954543302,3.62681071005672,4.36921938885203,2.57259436035947,0.85960031981627,2.57836046138721,0.606949382578793,0,0,0.338844532069132,0.889294796111139,2.6996991518442,0,3.5524005747305,1.79760066311043,1.92109152660777,0.622137673850866,0.135005938331691,0.210324961351382,1.71390590642282,1.54607978666129,0,0.287536413054709,0,0,1.14918604276669,1.0752457327937,0.791317726381163,0.914876436024097,1.56274011167028,0.837548997004143,2.25105044012672,1.06958773443767,0.883885756421003,1.42371680799103,0.931997229126503,0.530083353332288,0.226714680320357,2.6087803983151,0,2.03991400112325,0,1.29955283489534,0.896053774194671,0.280888840263504,0.340860645156116,0.259786004602869,0,0.281686839553361,0,5.09610479413291,14.2213340630666,6.27824018932521,4.56047757855178,6.57181778519218,0.91347103775248,10.0985774622397,1.92974780784272,0.346970653532272,0,0.922461989024234,0.904335843315735,1.17588707135705,0.628332956648377,0.741584903203122,1.01219549843938,1.76922110389975,1.61766849947409,0.883366073841574,2.42437626567611,0,0,0.83778682725382,1.27728527604296,5.27186547826049,2.39961092397363,2.54140454146129,0.748953197024114,0.457500602818626,0.376963056338593,1.04294592115366,0.511430914660661,0.62336413367868,0.486723789203273,0.712875546952214,1.99051152976149,1.26361379216837,0.420883711772948,0.390361328888111,0,0.180062129805349,0.452114453507145,1.15662048557257,0.896796041993948,1.03071897015702,0.258703370739016,0,0.378212160335639,0.703804496655795,0.657587197282725,0,0.348252166522167,0.823128545631774,0.796137067273973,0.702213187313235,1.80143534980301,2.84163499395593,0,0.234526059981096,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,1.31647879930784,0.820837320395476,1.05389452409612,0.584799949701329,1.3173006917463,0.134206418760372,1.26173969138476,0.30871383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|EntrezGene=22031
|HGNC=
|MCL_coexpression_id=2768
|UniProt=D3Z343
|association_with_transcript=0bp_to_ENSMUST00000139162_5end
|description=CAGE_peak_3_at_Traf3_5end
|id=chr12:112404696..112404731,+
|ontology_enrichment_celltype=CL:0000063!5.26e-08!66;CL:0000988!8.78e-08!32;CL:0002032!8.78e-08!32;CL:0000037!8.78e-08!32;CL:0000566!8.78e-08!32;CL:0000837!8.78e-08!32
|ontology_enrichment_celltype_v019_2=CL:0000988,1.36e-09,32;CL:0002032,1.36e-09,32;CL:0000037,1.36e-09,32;CL:0000837,1.36e-09,32;CL:0002031,1.99e-08,25;CL:0002320,2.75e-07,46;CL:0000134,2.75e-07,46;CL:0000738,3.85e-07,17;CL:0002087,3.85e-07,17;CL:0000791,5.35e-07,9;CL:0000789,5.35e-07,9;CL:0002420,5.35e-07,9;CL:0002419,5.35e-07,9;CL:0000790,5.35e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!8.03e-15!48;UBERON:0002390!5.23e-13!45;UBERON:0003061!5.23e-13!45;UBERON:0000072!2.64e-09!27;UBERON:0002405!3.23e-09!70;UBERON:0003081!7.80e-09!88;UBERON:0004177!1.48e-08!29;UBERON:0003408!3.75e-08!24;UBERON:0002370!7.30e-08!23;UBERON:0000974!7.30e-08!23;UBERON:0004807!7.30e-08!23;UBERON:0005058!7.30e-08!23;UBERON:0003351!7.30e-08!23;UBERON:0009113!7.30e-08!23;UBERON:0003295!7.30e-08!23;UBERON:0009722!7.30e-08!23;UBERON:0005562!7.30e-08!23;UBERON:0007690!7.30e-08!23;UBERON:0006562!1.03e-07!24;UBERON:0001557!1.03e-07!24;UBERON:0001042!1.03e-07!24;UBERON:0008814!1.03e-07!24;UBERON:0009145!1.03e-07!24;UBERON:0000063!7.79e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.60e-17,48;UBERON:0002405,1.60e-17,48;UBERON:0002390,2.96e-15,45;UBERON:0003061,2.96e-15,45;UBERON:0000072,2.22e-11,27;UBERON:0003408,1.71e-10,24;UBERON:0002370,3.99e-10,23;UBERON:0000974,3.99e-10,23;UBERON:0004807,3.99e-10,23;UBERON:0005058,3.99e-10,23;UBERON:0003351,3.99e-10,23;UBERON:0009113,3.99e-10,23;UBERON:0003295,3.99e-10,23;UBERON:0009722,3.99e-10,23;UBERON:0005562,3.99e-10,23;UBERON:0007690,3.99e-10,23;UBERON:0003081,1.05e-09,87;UBERON:0004177,1.16e-09,29;UBERON:0005057,1.16e-09,29;UBERON:0006562,2.32e-09,24;UBERON:0001557,2.32e-09,24;UBERON:0001042,2.32e-09,24;UBERON:0008814,2.32e-09,24;UBERON:0009145,2.32e-09,24;UBERON:0000077,3.99e-09,35;UBERON:0001004,5.96e-08,42;UBERON:0000065,1.29e-07,41;UBERON:0002384,2.75e-07,46
|phase1_expression=0.480446541314382,11.5161884520989,15.9249733786338,0.60492842261366,2.50447864973174,11.2479112180966,8.64366770203445,5.03580961422147,4.50523910885334,3.97909694747389,4.45166717386313,3.58974715479014,2.73921167889929,2.62261207256992,4.66353666541928,3.23960427823721,0.699561878128147,11.0411757875383,13.4372144933624,13.1560792057389,0.510259740906419,0.397163804803541,0.522399578277871,7.67963629408352,8.02932483735095,9.76194338995534,8.18447792702242,9.9116767035509,0.570070258369122,0.504060259519861,4.21287970245079,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0.837063261473815,0,1.0470474879476,1.17646297606203,2.73218193983378,1.94204141212461,2.14024590558481,2.73717714292689,1.65192076945513,0.782391344348039,0.65407546914134,0.878744730937887,1.55543919259427,0.139986421625363,0,12.5836954543302,3.62681071005672,4.36921938885203,2.57259436035947,0.85960031981627,2.57836046138721,0.606949382578793,0,0,0.338844532069132,0.889294796111139,2.6996991518442,0,3.5524005747305,1.79760066311043,1.92109152660777,0.622137673850866,0.135005938331691,0.210324961351382,1.71390590642282,1.54607978666129,0,0.287536413054709,0,0,1.14918604276669,1.0752457327937,0.791317726381163,0.914876436024097,1.56274011167028,0.837548997004143,2.25105044012672,1.06958773443767,0.883885756421003,1.42371680799103,0.931997229126503,0.530083353332288,0.226714680320357,2.6087803983151,0,2.03991400112325,0,1.29955283489534,0.896053774194671,0.280888840263504,0.340860645156116,0.259786004602869,0,0.281686839553361,0,5.09610479413291,14.2213340630666,6.27824018932521,4.56047757855178,6.57181778519218,0.91347103775248,10.0985774622397,1.92974780784272,0.346970653532272,0,0.922461989024234,0.904335843315735,1.17588707135705,0.628332956648377,0.741584903203122,1.01219549843938,1.76922110389975,1.61766849947409,0.883366073841574,2.42437626567611,0,0,0.83778682725382,1.27728527604296,5.27186547826049,2.39961092397363,2.54140454146129,0.748953197024114,0.457500602818626,0.376963056338593,1.04294592115366,0.511430914660661,0.62336413367868,0.486723789203273,0.712875546952214,1.99051152976149,1.26361379216837,0.420883711772948,0.390361328888111,0,0.180062129805349,0.452114453507145,1.15662048557257,0.896796041993948,1.03071897015702,0.258703370739016,0,0.378212160335639,0.703804496655795,0.657587197282725,0,0.348252166522167,0.823128545631774,0.796137067273973,0.702213187313235,1.80143534980301,2.84163499395593,0,0.234526059981096,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,1.31647879930784,0.820837320395476,1.05389452409612,0.584799949701329,1.3173006917463,0.134206418760372,1.26173969138476,0.308713837137853,0.991256348951394,0,0.639864751605702,0.696710015581316,0.257734922644187,0.80673409849337,0.444756087689741,0.951128130562796,0.474529061544512,0.823494773620054,0.754005626400808,0.198956472041151,1.16978452271472,0,1.72910439899755,1.99141273254367,0.758671603812327,0.228497025219458,1.1270773567308,0.203651327845314,0.775809948670503,0.98190147846446,1.07502113111237,0.442830443938806,1.09899109488962,0.616985819609003,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.972811360650212,1.37280706594041,1.43768206527355,1.48856379067401,1.5601883655728,1.01031551178845,0.717589654087649,0.482443521363367,2.40179147216586,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0,0.780534591431195,1.26108115284953,1.10732344824387,0.637819074629948,1.3109065177259,3.28101465545202,0.867894351489069,6.03165135757089,5.98296252200581,0.983528546038072,0.827810238914197,0.80275294993896,1.17211686592203,0.983609672260053,0.504941854408746,0,0.780877488593277,0.646270193198397,0.477937595905104,0,0.566153061577665,1.21443210502468,0.876767573733936,0.790575555893047,0,1.13552068166615,0.712262414669021,1.95464351224291,0.824850614862677,0,0,0.604647113929502,0.188605079755898,0.590603785761546,0.614870295887855,1.29214146584111,3.27180356529755,0.712994756769443,0.948110273807448,1.05418608574999,4.12542172992747,1.36175842301515,0,0.517434735131018,0.428674070063185,0.532020700926821,0.891844088010353,0.493647061806363,0.913394847343798,2.58138878870081,0.847328283455281,0.882113592219848,1.15420377059036,0.807322133479528,0.904693873922338,0.596861720015682,1.31312719796049,1.1659233465194,1.29797711407357,4.61351378154202,0.82554747185289,0.740778109478847,0.941842285023455,2.46049609897845,3.88922894451088,7.13909405974192,6.43776680688827,7.32459861163446,0,0.632671987162271,1.21991680276109,1.08005340821801,0.209088296014469,0.436725127492355,0.539457385539283,1.48776220305605,1.30877970992015,0.90730481304255,1.86401793926078,0,0.448549638131936,1.32366792365678,0.583353565032143,0.645799117388655,1.35164900392623,1.05621514781179,1.0416350787516,0.734015410979976,0.483168241652012,0,2.8441000856536,1.21635129174099,3.49217254360413,1.68897069871134,2.32734704367726,1.78813219303138,1.9231271923195,1.62458479892035,1.00966449948148,1.5241361331,1.41156659191577,2.33898913775406,1.92423683280659,2.22066114144981,0.906921534460845,0,0.179427713218951,0.503653849092235,1.54551675225752,1.12609485270709,0.915758121336325,0,2.00628841614145,0,1.38097570952153,1.14579102687879,1.03111909406213,0.685082519770642,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.207574695168353,1.19707462020309,0.512200817262403,1.21553358534147,0.628839487883947,0.183843508450014,0.666740183404846,1.23621034343337,0.962757628775446,0,0.50695859978048,0.188626341386076,0.936415074698824,0.640251524048693,0.402048282689293,1.42888107384922,0.927074607558844,1.15745532278223,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.872078499793971,0.658765662907314,0.423073039458382,0.182927972872773,0.789209134313529,0.543216455383447,0,1.06771516311757,0.492522411877817,0.818462086339379,1.39443157067369,0.385813221962283,0,0.467863216890817,1.07435527024149,0.382576664137687,0.441182838239031,1.15933917810211
|short_description=p3@Traf3
}}

Revision as of 22:18, 12 September 2013

Short description:p3@Traf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Traf3_5end
Coexpression cluster:MCL_coexpression_mm9:2768
Association with transcript: 0bp_to_ENSMUST00000139162_5end
EntrezGene:Traf3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Traf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.59
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.03
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I18.18
GP2+ M cell, pool3.CNhs13240.11847-124I29.91
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H910.10
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.32
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I23.49
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.60e-1748
immune system1.60e-1748
hematopoietic system2.96e-1545
blood island2.96e-1545
segment of respiratory tract2.22e-1127
gland of gut1.71e-1024
thymus3.99e-1023
neck3.99e-1023
respiratory system epithelium3.99e-1023
hemolymphoid system gland3.99e-1023
pharyngeal epithelium3.99e-1023
thymic region3.99e-1023
pharyngeal gland3.99e-1023
entire pharyngeal arch endoderm3.99e-1023
thymus primordium3.99e-1023
early pharyngeal endoderm3.99e-1023
lateral plate mesoderm1.05e-0987
hemopoietic organ1.16e-0929
immune organ1.16e-0929
pharynx2.32e-0924
upper respiratory tract2.32e-0924
chordate pharynx2.32e-0924
pharyngeal arch system2.32e-0924
pharyngeal region of foregut2.32e-0924
mixed endoderm/mesoderm-derived structure3.99e-0935
respiratory system5.96e-0842
respiratory tract1.29e-0741
connective tissue2.75e-0746







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