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FFCP PHASE1:Mm9::chrX:54591775..54591787,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=73341|HGNC=|MCL_coexpression_id=31|UniProt=|association_with_transcript=-92bp_to_ENSMUST00000135098_5end|description=CAGE_peak_6_at_Arhgef6_5end|id=chrX:54591775..54591787,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-07,3;DOID:4045,1.75e-07,3|ontology_enrichment_uberon=UBERON:0003081!3.85e-10!88;UBERON:0004177!5.18e-09!29;UBERON:0000065!3.57e-08!41;UBERON:0006562!9.86e-08!24;UBERON:0001557!9.86e-08!24;UBERON:0001042!9.86e-08!24;UBERON:0008814!9.86e-08!24;UBERON:0009145!9.86e-08!24;UBERON:0002193!1.08e-07!48;UBERON:0001004!1.11e-07!42;UBERON:0002390!1.61e-07!45;UBERON:0003061!1.61e-07!45;UBERON:0002370!1.65e-07!23;UBERON:0000974!1.65e-07!23;UBERON:0004807!1.65e-07!23;UBERON:0005058!1.65e-07!23;UBERON:0003351!1.65e-07!23;UBERON:0009113!1.65e-07!23;UBERON:0003295!1.65e-07!23;UBERON:0009722!1.65e-07!23;UBERON:0005562!1.65e-07!23;UBERON:0007690!1.65e-07!23;UBERON:0000926!1.73e-07!193;UBERON:0004120!1.73e-07!193;UBERON:0006603!1.73e-07!193;UBERON:0003408!7.49e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.08e-14,48;UBERON:0002405,3.08e-14,48;UBERON:0002390,9.31e-14,45;UBERON:0003061,9.31e-14,45;UBERON:0000077,2.01e-13,35;UBERON:0004177,1.08e-12,29;UBERON:0005057,1.08e-12,29;UBERON:0002370,9.57e-11,23;UBERON:0000974,9.57e-11,23;UBERON:0004807,9.57e-11,23;UBERON:0005058,9.57e-11,23;UBERON:0003351,9.57e-11,23;UBERON:0009113,9.57e-11,23;UBERON:0003295,9.57e-11,23;UBERON:0009722,9.57e-11,23;UBERON:0005562,9.57e-11,23;UBERON:0007690,9.57e-11,23;UBERON:0006562,3.53e-10,24;UBERON:0003408,3.53e-10,24;UBERON:0001557,3.53e-10,24;UBERON:0001042,3.53e-10,24;UBERON:0008814,3.53e-10,24;UBERON:0009145,3.53e-10,24;UBERON:0000065,4.01e-09,41;UBERON:0001004,8.16e-09,42;UBERON:0000072,9.82e-09,27;UBERON:0003081,3.48e-08,87;UBERON:0005631,7.62e-08,3;UBERON:0000478,7.62e-08,3;UBERON:0000158,7.62e-08,3;UBERON:0000926,4.24e-07,120;UBERON:0004120,4.24e-07,120;UBERON:0006603,4.24e-07,120|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,1.267098499365,1.17032263160997,0.68487187290202,0.558405112967355,1.02720437958723,1.39872643870396,0,0.809901069559304,0,2.68142840554502,2.87940310572051,2.54633791078818,0.17008658030214,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,2.92972141515835,5.4693474116666,2.61761871986899,2.35292595212406,3.41522742479223,2.91306211818692,0.881277725829041,0.709638518536602,0,0,0,0,0,0,0,2.01339127269284,0.725362142011344,0.336093799142464,0.514518872071894,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0.186399445825301,0.37863096666592,0,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,0.11418387971906,5.17875767294343,0.445326417194474,0,0,0,0,0.470354828542819,0.125666591329675,11.6181634835156,0.86759614151947,2.65383165584962,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0.838705871541442,0,1.27070227073065,0.149790639404823,0,0,0.173824320192276,0,0,0,0.305518091550949,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0.51469581422943,2.27330799516474,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0.292399974850665,0.658650345873152,0.805238512562231,0,0.205809224758569,0.330418782983798,0.528901133327089,0.213288250535234,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.140271639780637,0.505892296994058,1.03327103585722,0.941992367048249,0.123397163921801,0.296452627087149,0,0.786235980452812,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0,0.670025029767263,0.952174563544055,0.975668239288994,1.26108115284953,0.8858587585951,0.797273843287435,2.78567635016755,1.20879487306127,1.3018415272336,0,1.63171705145613,0.983528546038072,0,0.160550589987792,0.35163505977661,0,0.252470927204373,0,0,0,0,0.222798674082394,0.566153061577665,0,0.584511715822624,0.395287777946524,0.321321316421807,1.13552068166615,0.534196811001766,0.162886959353576,0.989820737835213,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0,0.712994756769443,0,1.05418608574999,0,1.02131881726136,0,0,0,0,0.178368817602071,0.493647061806363,0,3.98941903708308,23.9370240076117,0,0.32977250588296,0,0.422190474497091,0.358117032009409,0.492422699235184,0.582961673259701,0,1.70870880797853,0.206386867963223,0.185194527369712,0.188368457004691,1.0935538217682,1.60144721244566,2.37969801991397,2.93898049879682,1.24379976423981,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0.288030006257865,1.58005560314089,0.202725215290164,0.205421914329655,0.389762468933385,0.716106782669926,0.596044064343795,1.08175904567972,1.32920574457119,1.41353029927407,1.21930890648,1.31074040677893,2.33898913775406,1.05833025804362,1.40252282617883,0.453460767230423,0,0,0.335769232728157,0.579568782096571,0.750729901804728,0.915758121336325,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0.57386499620653,0,0.231867835620421|short_description=p6@Arhgef6}}
|EntrezGene=73341
|HGNC=
|MCL_coexpression_id=31
|UniProt=
|association_with_transcript=-92bp_to_ENSMUST00000135098_5end
|description=CAGE_peak_6_at_Arhgef6_5end
|id=chrX:54591775..54591787,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-07,3;DOID:4045,1.75e-07,3
|ontology_enrichment_uberon=UBERON:0003081!3.85e-10!88;UBERON:0004177!5.18e-09!29;UBERON:0000065!3.57e-08!41;UBERON:0006562!9.86e-08!24;UBERON:0001557!9.86e-08!24;UBERON:0001042!9.86e-08!24;UBERON:0008814!9.86e-08!24;UBERON:0009145!9.86e-08!24;UBERON:0002193!1.08e-07!48;UBERON:0001004!1.11e-07!42;UBERON:0002390!1.61e-07!45;UBERON:0003061!1.61e-07!45;UBERON:0002370!1.65e-07!23;UBERON:0000974!1.65e-07!23;UBERON:0004807!1.65e-07!23;UBERON:0005058!1.65e-07!23;UBERON:0003351!1.65e-07!23;UBERON:0009113!1.65e-07!23;UBERON:0003295!1.65e-07!23;UBERON:0009722!1.65e-07!23;UBERON:0005562!1.65e-07!23;UBERON:0007690!1.65e-07!23;UBERON:0000926!1.73e-07!193;UBERON:0004120!1.73e-07!193;UBERON:0006603!1.73e-07!193;UBERON:0003408!7.49e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.08e-14,48;UBERON:0002405,3.08e-14,48;UBERON:0002390,9.31e-14,45;UBERON:0003061,9.31e-14,45;UBERON:0000077,2.01e-13,35;UBERON:0004177,1.08e-12,29;UBERON:0005057,1.08e-12,29;UBERON:0002370,9.57e-11,23;UBERON:0000974,9.57e-11,23;UBERON:0004807,9.57e-11,23;UBERON:0005058,9.57e-11,23;UBERON:0003351,9.57e-11,23;UBERON:0009113,9.57e-11,23;UBERON:0003295,9.57e-11,23;UBERON:0009722,9.57e-11,23;UBERON:0005562,9.57e-11,23;UBERON:0007690,9.57e-11,23;UBERON:0006562,3.53e-10,24;UBERON:0003408,3.53e-10,24;UBERON:0001557,3.53e-10,24;UBERON:0001042,3.53e-10,24;UBERON:0008814,3.53e-10,24;UBERON:0009145,3.53e-10,24;UBERON:0000065,4.01e-09,41;UBERON:0001004,8.16e-09,42;UBERON:0000072,9.82e-09,27;UBERON:0003081,3.48e-08,87;UBERON:0005631,7.62e-08,3;UBERON:0000478,7.62e-08,3;UBERON:0000158,7.62e-08,3;UBERON:0000926,4.24e-07,120;UBERON:0004120,4.24e-07,120;UBERON:0006603,4.24e-07,120
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,1.267098499365,1.17032263160997,0.68487187290202,0.558405112967355,1.02720437958723,1.39872643870396,0,0.809901069559304,0,2.68142840554502,2.87940310572051,2.54633791078818,0.17008658030214,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,2.92972141515835,5.4693474116666,2.61761871986899,2.35292595212406,3.41522742479223,2.91306211818692,0.881277725829041,0.709638518536602,0,0,0,0,0,0,0,2.01339127269284,0.725362142011344,0.336093799142464,0.514518872071894,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0.186399445825301,0.37863096666592,0,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,0.11418387971906,5.17875767294343,0.445326417194474,0,0,0,0,0.470354828542819,0.125666591329675,11.6181634835156,0.86759614151947,2.65383165584962,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0.838705871541442,0,1.27070227073065,0.149790639404823,0,0,0.173824320192276,0,0,0,0.305518091550949,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0.51469581422943,2.27330799516474,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0.292399974850665,0.658650345873152,0.805238512562231,0,0.205809224758569,0.330418782983798,0.528901133327089,0.213288250535234,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.140271639780637,0.505892296994058,1.03327103585722,0.941992367048249,0.123397163921801,0.296452627087149,0,0.786235980452812,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0,0.670025029767263,0.952174563544055,0.975668239288994,1.26108115284953,0.8858587585951,0.797273843287435,2.78567635016755,1.20879487306127,1.3018415272336,0,1.63171705145613,0.983528546038072,0,0.160550589987792,0.35163505977661,0,0.252470927204373,0,0,0,0,0.222798674082394,0.566153061577665,0,0.584511715822624,0.395287777946524,0.321321316421807,1.13552068166615,0.534196811001766,0.162886959353576,0.989820737835213,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0,0.712994756769443,0,1.05418608574999,0,1.02131881726136,0,0,0,0,0.178368817602071,0.493647061806363,0,3.98941903708308,23.9370240076117,0,0.32977250588296,0,0.422190474497091,0.358117032009409,0.492422699235184,0.582961673259701,0,1.70870880797853,0.206386867963223,0.185194527369712,0.188368457004691,1.0935538217682,1.60144721244566,2.37969801991397,2.93898049879682,1.24379976423981,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0.288030006257865,1.58005560314089,0.202725215290164,0.205421914329655,0.389762468933385,0.716106782669926,0.596044064343795,1.08175904567972,1.32920574457119,1.41353029927407,1.21930890648,1.31074040677893,2.33898913775406,1.05833025804362,1.40252282617883,0.453460767230423,0,0,0.335769232728157,0.579568782096571,0.750729901804728,0.915758121336325,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0.57386499620653,0,0.231867835620421
|short_description=p6@Arhgef6
}}

Revision as of 19:56, 14 September 2013

Short description:p6@Arhgef6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Arhgef6_5end
Coexpression cluster:MCL_coexpression_mm9:31
Association with transcript: -92bp_to_ENSMUST00000135098_5end
EntrezGene:Arhgef6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Arhgef6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A811.62
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G323.94
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system3.08e-1448
immune system3.08e-1448
hematopoietic system9.31e-1445
blood island9.31e-1445
mixed endoderm/mesoderm-derived structure2.01e-1335
hemopoietic organ1.08e-1229
immune organ1.08e-1229
thymus9.57e-1123
neck9.57e-1123
respiratory system epithelium9.57e-1123
hemolymphoid system gland9.57e-1123
pharyngeal epithelium9.57e-1123
thymic region9.57e-1123
pharyngeal gland9.57e-1123
entire pharyngeal arch endoderm9.57e-1123
thymus primordium9.57e-1123
early pharyngeal endoderm9.57e-1123
pharynx3.53e-1024
gland of gut3.53e-1024
upper respiratory tract3.53e-1024
chordate pharynx3.53e-1024
pharyngeal arch system3.53e-1024
pharyngeal region of foregut3.53e-1024
respiratory tract4.01e-0941
respiratory system8.16e-0942
segment of respiratory tract9.82e-0927
lateral plate mesoderm3.48e-0887
extraembryonic membrane7.62e-083
extraembryonic structure7.62e-083
membranous layer7.62e-083
mesoderm4.24e-07120
mesoderm-derived structure4.24e-07120
presumptive mesoderm4.24e-07120

Disease
Ontology termp-valuen
musculoskeletal system cancer1.75e-073
muscle cancer1.75e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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