FFCP PHASE1:Mm9::chr15:96849958..96849969,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=111|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:96849958..96849969,-|id=chr15:96849958..96849969,-|ontology_enrichment_celltype=CL:0000181!1.40e-11!5;CL:0000417!1.40e-11!5;CL:0000668!1.40e-11!5;CL:0000412!1.40e-11!5;CL:0000182!1.40e-11!5|ontology_enrichment_celltype_v019_2=CL:0000182,9.03e-21,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.06e-40!22;UBERON:0007499!4.06e-40!22;UBERON:0006925!4.06e-40!22;UBERON:0009497!4.06e-40!22;UBERON:0000015!4.06e-40!22;UBERON:0002423!4.06e-40!22;UBERON:0006235!4.06e-40!22;UBERON:0008835!4.06e-40!22;UBERON:0003894!4.06e-40!22;UBERON:0004161!4.06e-40!22;UBERON:0008836!4.06e-40!22;UBERON:0009854!3.99e-38!23;UBERON:0009856!3.99e-38!23;UBERON:0002365!1.28e-34!25;UBERON:0002330!1.28e-34!25;UBERON:0003914!8.74e-16!47;UBERON:0005256!8.74e-16!47;UBERON:0005172!6.45e-15!49;UBERON:0005173!6.45e-15!49;UBERON:0002417!6.45e-15!49;UBERON:0000916!6.45e-15!49;UBERON:0005057!4.06e-14!51;UBERON:0000466!1.56e-13!79;UBERON:0000949!4.62e-13!72;UBERON:0003929!1.07e-12!55;UBERON:0001041!1.03e-11!92;UBERON:0002368!3.43e-11!60;UBERON:0005177!4.41e-11!85;UBERON:0000077!9.37e-11!97;UBERON:0009569!9.48e-11!66;UBERON:0005911!4.82e-10!69;UBERON:0002530!6.35e-10!65;UBERON:0000490!1.08e-09!66;UBERON:0002405!7.65e-09!70;UBERON:0002100!9.18e-09!98;UBERON:0004921!1.99e-07!126;UBERON:0004185!1.99e-07!126;UBERON:0001007!3.32e-07!128;UBERON:0001555!3.32e-07!128;UBERON:0007026!3.32e-07!128;UBERON:0004119!5.45e-07!130;UBERON:0000925!5.45e-07!130;UBERON:0006595!5.45e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.43e-34,22;UBERON:0007499,7.43e-34,22;UBERON:0006925,7.43e-34,22;UBERON:0009497,7.43e-34,22;UBERON:0000015,7.43e-34,22;UBERON:0002423,7.43e-34,22;UBERON:0006235,7.43e-34,22;UBERON:0008835,7.43e-34,22;UBERON:0003894,7.43e-34,22;UBERON:0004161,7.43e-34,22;UBERON:0008836,7.43e-34,22;UBERON:0009854,2.44e-32,23;UBERON:0009856,2.44e-32,23;UBERON:0002365,1.14e-29,25;UBERON:0002330,1.14e-29,25;UBERON:0005256,5.51e-16,45;UBERON:0003914,2.96e-15,47;UBERON:0005172,1.39e-14,49;UBERON:0005173,1.39e-14,49;UBERON:0002417,1.39e-14,49;UBERON:0000916,1.39e-14,49;UBERON:0003929,7.38e-13,55;UBERON:0002368,1.11e-11,60;UBERON:0003104,1.80e-11,61;UBERON:0009142,1.80e-11,61;UBERON:0000949,2.00e-11,72;UBERON:0002530,1.10e-10,65;UBERON:0000490,1.66e-10,66;UBERON:0009569,1.66e-10,66;UBERON:0005177,2.73e-10,79;UBERON:0005911,5.42e-10,69;UBERON:0002100,7.36e-09,90;UBERON:0001041,1.95e-08,80;UBERON:0000305,2.05e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,3.39985666853875,1.07940638327563,3.89865850468601,2.24013443548668,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.500535317148282,0.196558995113203,0.449724224769707,0.811440485554012,0.72353147925725,0.25462585178142,1.72617682470486,4.53978634970099,1.37280706594041,1.43768206527355,1.11642284300551,0.936113019343682,2.27320990152401,0.179397413521912,2.41221760681684,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390318077491,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p@chr15:96849958..96849969,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=111 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:96849958..96849969,- | |||
|id=chr15:96849958..96849969,- | |||
|ontology_enrichment_celltype=CL:0000181!1.40e-11!5;CL:0000417!1.40e-11!5;CL:0000668!1.40e-11!5;CL:0000412!1.40e-11!5;CL:0000182!1.40e-11!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.03e-21,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.06e-40!22;UBERON:0007499!4.06e-40!22;UBERON:0006925!4.06e-40!22;UBERON:0009497!4.06e-40!22;UBERON:0000015!4.06e-40!22;UBERON:0002423!4.06e-40!22;UBERON:0006235!4.06e-40!22;UBERON:0008835!4.06e-40!22;UBERON:0003894!4.06e-40!22;UBERON:0004161!4.06e-40!22;UBERON:0008836!4.06e-40!22;UBERON:0009854!3.99e-38!23;UBERON:0009856!3.99e-38!23;UBERON:0002365!1.28e-34!25;UBERON:0002330!1.28e-34!25;UBERON:0003914!8.74e-16!47;UBERON:0005256!8.74e-16!47;UBERON:0005172!6.45e-15!49;UBERON:0005173!6.45e-15!49;UBERON:0002417!6.45e-15!49;UBERON:0000916!6.45e-15!49;UBERON:0005057!4.06e-14!51;UBERON:0000466!1.56e-13!79;UBERON:0000949!4.62e-13!72;UBERON:0003929!1.07e-12!55;UBERON:0001041!1.03e-11!92;UBERON:0002368!3.43e-11!60;UBERON:0005177!4.41e-11!85;UBERON:0000077!9.37e-11!97;UBERON:0009569!9.48e-11!66;UBERON:0005911!4.82e-10!69;UBERON:0002530!6.35e-10!65;UBERON:0000490!1.08e-09!66;UBERON:0002405!7.65e-09!70;UBERON:0002100!9.18e-09!98;UBERON:0004921!1.99e-07!126;UBERON:0004185!1.99e-07!126;UBERON:0001007!3.32e-07!128;UBERON:0001555!3.32e-07!128;UBERON:0007026!3.32e-07!128;UBERON:0004119!5.45e-07!130;UBERON:0000925!5.45e-07!130;UBERON:0006595!5.45e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.43e-34,22;UBERON:0007499,7.43e-34,22;UBERON:0006925,7.43e-34,22;UBERON:0009497,7.43e-34,22;UBERON:0000015,7.43e-34,22;UBERON:0002423,7.43e-34,22;UBERON:0006235,7.43e-34,22;UBERON:0008835,7.43e-34,22;UBERON:0003894,7.43e-34,22;UBERON:0004161,7.43e-34,22;UBERON:0008836,7.43e-34,22;UBERON:0009854,2.44e-32,23;UBERON:0009856,2.44e-32,23;UBERON:0002365,1.14e-29,25;UBERON:0002330,1.14e-29,25;UBERON:0005256,5.51e-16,45;UBERON:0003914,2.96e-15,47;UBERON:0005172,1.39e-14,49;UBERON:0005173,1.39e-14,49;UBERON:0002417,1.39e-14,49;UBERON:0000916,1.39e-14,49;UBERON:0003929,7.38e-13,55;UBERON:0002368,1.11e-11,60;UBERON:0003104,1.80e-11,61;UBERON:0009142,1.80e-11,61;UBERON:0000949,2.00e-11,72;UBERON:0002530,1.10e-10,65;UBERON:0000490,1.66e-10,66;UBERON:0009569,1.66e-10,66;UBERON:0005177,2.73e-10,79;UBERON:0005911,5.42e-10,69;UBERON:0002100,7.36e-09,90;UBERON:0001041,1.95e-08,80;UBERON:0000305,2.05e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,3.39985666853875,1.07940638327563,3.89865850468601,2.24013443548668,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.500535317148282,0.196558995113203,0.449724224769707,0.811440485554012,0.72353147925725,0.25462585178142,1.72617682470486,4.53978634970099,1.37280706594041,1.43768206527355,1.11642284300551,0.936113019343682,2.27320990152401,0.179397413521912,2.41221760681684,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390318077491,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr15:96849958..96849969,- | |||
}} |
Revision as of 11:43, 13 September 2013
Short description: | p@chr15:96849958..96849969, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:96849958..96849969, - |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.03e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 7.43e-34 | 22 |
epithelial sac | 7.43e-34 | 22 |
digestive gland | 7.43e-34 | 22 |
epithelium of foregut-midgut junction | 7.43e-34 | 22 |
anatomical boundary | 7.43e-34 | 22 |
hepatobiliary system | 7.43e-34 | 22 |
foregut-midgut junction | 7.43e-34 | 22 |
hepatic diverticulum | 7.43e-34 | 22 |
liver primordium | 7.43e-34 | 22 |
septum transversum | 7.43e-34 | 22 |
liver bud | 7.43e-34 | 22 |
digestive tract diverticulum | 2.44e-32 | 23 |
sac | 2.44e-32 | 23 |
exocrine gland | 1.14e-29 | 25 |
exocrine system | 1.14e-29 | 25 |
trunk mesenchyme | 5.51e-16 | 45 |
epithelial tube | 2.96e-15 | 47 |
abdomen element | 1.39e-14 | 49 |
abdominal segment element | 1.39e-14 | 49 |
abdominal segment of trunk | 1.39e-14 | 49 |
abdomen | 1.39e-14 | 49 |
gut epithelium | 7.38e-13 | 55 |
endocrine gland | 1.11e-11 | 60 |
mesenchyme | 1.80e-11 | 61 |
entire embryonic mesenchyme | 1.80e-11 | 61 |
endocrine system | 2.00e-11 | 72 |
gland | 1.10e-10 | 65 |
unilaminar epithelium | 1.66e-10 | 66 |
subdivision of trunk | 1.66e-10 | 66 |
trunk region element | 2.73e-10 | 79 |
endo-epithelium | 5.42e-10 | 69 |
trunk | 7.36e-09 | 90 |
foregut | 1.95e-08 | 80 |
amnion | 2.05e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.