FFCP PHASE1:Mm9::chr3:84024757..84024768,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=80890|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128574_5end|description=CAGE_peak_14_at_Trim2_5end|id=chr3:84024757..84024768,-|ontology_enrichment_celltype=CL:0000117!2.97e-14!23;CL:0000337!2.97e-14!23;CL:0000540!7.63e-11!33;CL:0000047!7.63e-11!33;CL:0000031!7.63e-11!33;CL:0000404!7.63e-11!33;CL:0000393!1.12e-10!39;CL:0000211!1.12e-10!39;CL:0000221!1.16e-09!44;CL:0000133!1.16e-09!44;CL:0002319!2.44e-09!43;CL:0000055!4.75e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.40e-30,23;CL:0000337,7.40e-30,23;CL:0000540,9.22e-20,33;CL:0000047,9.22e-20,33;CL:0000031,9.22e-20,33;CL:0000404,9.22e-20,33;CL:0000393,3.44e-16,39;CL:0000211,3.44e-16,39;CL:0002319,2.30e-14,43;CL:0000221,5.85e-14,44;CL:0000133,5.85e-14,44;CL:0002612,4.09e-10,3;CL:0002613,8.11e-10,3;CL:0002610,9.29e-10,3;CL:0002321,1.61e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.77e-26!52;UBERON:0005068!6.77e-26!52;UBERON:0006241!6.77e-26!52;UBERON:0007135!6.77e-26!52;UBERON:0000073!1.22e-25!75;UBERON:0001016!1.22e-25!75;UBERON:0001017!2.76e-25!73;UBERON:0005743!2.76e-25!73;UBERON:0002346!4.16e-25!71;UBERON:0003075!4.16e-25!71;UBERON:0007284!4.16e-25!71;UBERON:0000033!7.91e-24!63;UBERON:0000955!1.15e-23!50;UBERON:0006238!1.15e-23!50;UBERON:0002616!3.10e-23!49;UBERON:0004121!6.60e-23!102;UBERON:0000924!6.60e-23!102;UBERON:0006601!6.60e-23!102;UBERON:0003056!9.62e-20!49;UBERON:0002020!4.80e-19!34;UBERON:0003080!7.61e-19!40;UBERON:0002780!3.09e-18!39;UBERON:0001890!3.09e-18!39;UBERON:0006240!3.09e-18!39;UBERON:0002791!9.37e-15!29;UBERON:0003528!9.37e-15!29;UBERON:0001893!9.37e-15!29;UBERON:0007811!6.87e-13!86;UBERON:0000153!2.13e-11!94;UBERON:0000956!3.31e-10!21;UBERON:0001869!3.31e-10!21;UBERON:0000203!3.31e-10!21;UBERON:0003076!1.35e-07!12;UBERON:0003057!1.35e-07!12;UBERON:0002619!1.44e-07!17;UBERON:0000025!1.49e-07!114;UBERON:0004111!8.73e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.13e-32,54;UBERON:0001017,9.19e-29,73;UBERON:0001016,7.45e-28,75;UBERON:0001049,8.74e-28,52;UBERON:0005068,8.74e-28,52;UBERON:0006241,8.74e-28,52;UBERON:0007135,8.74e-28,52;UBERON:0002020,2.94e-27,34;UBERON:0003076,5.68e-23,12;UBERON:0003057,5.68e-23,12;UBERON:0002346,1.17e-21,64;UBERON:0003075,1.17e-21,64;UBERON:0007284,1.17e-21,64;UBERON:0004121,7.39e-21,95;UBERON:0000924,7.39e-21,95;UBERON:0006601,7.39e-21,95;UBERON:0010371,2.22e-18,73;UBERON:0002240,1.45e-17,6;UBERON:0005174,1.45e-17,6;UBERON:0001137,1.45e-17,6;UBERON:0003528,8.35e-17,29;UBERON:0002791,8.35e-17,29;UBERON:0001893,8.35e-17,29;UBERON:0002616,1.01e-16,46;UBERON:0000955,2.77e-16,47;UBERON:0006238,2.77e-16,47;UBERON:0001948,5.48e-15,5;UBERON:0002315,5.48e-15,5;UBERON:0010314,1.46e-13,92;UBERON:0002420,3.99e-13,8;UBERON:0007245,3.99e-13,8;UBERON:0010009,3.99e-13,8;UBERON:0010011,3.99e-13,8;UBERON:0000454,3.99e-13,8;UBERON:0002780,9.47e-12,39;UBERON:0001890,9.47e-12,39;UBERON:0006240,9.47e-12,39;UBERON:0003080,2.20e-11,40;UBERON:0002257,4.09e-10,3;UBERON:0000025,5.52e-10,114;UBERON:0000369,6.08e-10,5;UBERON:0002435,6.08e-10,5;UBERON:0000204,6.08e-10,5;UBERON:0010082,6.08e-10,5;UBERON:0004684,9.29e-10,3;UBERON:0002275,9.29e-10,3;UBERON:0004111,5.28e-09,122;UBERON:0003056,9.08e-09,49;UBERON:0004733,5.96e-08,6;UBERON:0004732,5.96e-08,6;UBERON:0002028,5.96e-08,6;UBERON:0007277,5.96e-08,6;UBERON:0000956,1.87e-07,21;UBERON:0001869,1.87e-07,21;UBERON:0000203,1.87e-07,21;UBERON:0011216,2.34e-07,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.829516898467821,0.945041568321835,1.05162480675691,1.42825492201902,1.32521124570968,0.857435594504678,0.862609239164127,0,1.10115880999389,2.68143409978894,2.91852413186863,4.3522474950964,3.11057988248193,1.04182674111352,1.3959149950069,0,2.44477196442896,3.24091444021034,1.56608848879013,2.42319279572891,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,2.72280718857492,0,0,0,0,0.599162557619291,0.457500602818626,1.50785222535437,1.04294592115366,2.04572365864264,0.62336413367868,0.973447578406546,0.203678727700633,0,0,0,0.390361328888111,0,0.180062129805349,0.753524089178575,0.408218994907967,0.896796041993948,0.937017245597288,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.243206428637567,0,0,0,1.26173969138476,2.6755199218614,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,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| ||
|EntrezGene=80890 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128574_5end | |||
|description=CAGE_peak_14_at_Trim2_5end | |||
|id=chr3:84024757..84024768,- | |||
|ontology_enrichment_celltype=CL:0000117!2.97e-14!23;CL:0000337!2.97e-14!23;CL:0000540!7.63e-11!33;CL:0000047!7.63e-11!33;CL:0000031!7.63e-11!33;CL:0000404!7.63e-11!33;CL:0000393!1.12e-10!39;CL:0000211!1.12e-10!39;CL:0000221!1.16e-09!44;CL:0000133!1.16e-09!44;CL:0002319!2.44e-09!43;CL:0000055!4.75e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.40e-30,23;CL:0000337,7.40e-30,23;CL:0000540,9.22e-20,33;CL:0000047,9.22e-20,33;CL:0000031,9.22e-20,33;CL:0000404,9.22e-20,33;CL:0000393,3.44e-16,39;CL:0000211,3.44e-16,39;CL:0002319,2.30e-14,43;CL:0000221,5.85e-14,44;CL:0000133,5.85e-14,44;CL:0002612,4.09e-10,3;CL:0002613,8.11e-10,3;CL:0002610,9.29e-10,3;CL:0002321,1.61e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.77e-26!52;UBERON:0005068!6.77e-26!52;UBERON:0006241!6.77e-26!52;UBERON:0007135!6.77e-26!52;UBERON:0000073!1.22e-25!75;UBERON:0001016!1.22e-25!75;UBERON:0001017!2.76e-25!73;UBERON:0005743!2.76e-25!73;UBERON:0002346!4.16e-25!71;UBERON:0003075!4.16e-25!71;UBERON:0007284!4.16e-25!71;UBERON:0000033!7.91e-24!63;UBERON:0000955!1.15e-23!50;UBERON:0006238!1.15e-23!50;UBERON:0002616!3.10e-23!49;UBERON:0004121!6.60e-23!102;UBERON:0000924!6.60e-23!102;UBERON:0006601!6.60e-23!102;UBERON:0003056!9.62e-20!49;UBERON:0002020!4.80e-19!34;UBERON:0003080!7.61e-19!40;UBERON:0002780!3.09e-18!39;UBERON:0001890!3.09e-18!39;UBERON:0006240!3.09e-18!39;UBERON:0002791!9.37e-15!29;UBERON:0003528!9.37e-15!29;UBERON:0001893!9.37e-15!29;UBERON:0007811!6.87e-13!86;UBERON:0000153!2.13e-11!94;UBERON:0000956!3.31e-10!21;UBERON:0001869!3.31e-10!21;UBERON:0000203!3.31e-10!21;UBERON:0003076!1.35e-07!12;UBERON:0003057!1.35e-07!12;UBERON:0002619!1.44e-07!17;UBERON:0000025!1.49e-07!114;UBERON:0004111!8.73e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.13e-32,54;UBERON:0001017,9.19e-29,73;UBERON:0001016,7.45e-28,75;UBERON:0001049,8.74e-28,52;UBERON:0005068,8.74e-28,52;UBERON:0006241,8.74e-28,52;UBERON:0007135,8.74e-28,52;UBERON:0002020,2.94e-27,34;UBERON:0003076,5.68e-23,12;UBERON:0003057,5.68e-23,12;UBERON:0002346,1.17e-21,64;UBERON:0003075,1.17e-21,64;UBERON:0007284,1.17e-21,64;UBERON:0004121,7.39e-21,95;UBERON:0000924,7.39e-21,95;UBERON:0006601,7.39e-21,95;UBERON:0010371,2.22e-18,73;UBERON:0002240,1.45e-17,6;UBERON:0005174,1.45e-17,6;UBERON:0001137,1.45e-17,6;UBERON:0003528,8.35e-17,29;UBERON:0002791,8.35e-17,29;UBERON:0001893,8.35e-17,29;UBERON:0002616,1.01e-16,46;UBERON:0000955,2.77e-16,47;UBERON:0006238,2.77e-16,47;UBERON:0001948,5.48e-15,5;UBERON:0002315,5.48e-15,5;UBERON:0010314,1.46e-13,92;UBERON:0002420,3.99e-13,8;UBERON:0007245,3.99e-13,8;UBERON:0010009,3.99e-13,8;UBERON:0010011,3.99e-13,8;UBERON:0000454,3.99e-13,8;UBERON:0002780,9.47e-12,39;UBERON:0001890,9.47e-12,39;UBERON:0006240,9.47e-12,39;UBERON:0003080,2.20e-11,40;UBERON:0002257,4.09e-10,3;UBERON:0000025,5.52e-10,114;UBERON:0000369,6.08e-10,5;UBERON:0002435,6.08e-10,5;UBERON:0000204,6.08e-10,5;UBERON:0010082,6.08e-10,5;UBERON:0004684,9.29e-10,3;UBERON:0002275,9.29e-10,3;UBERON:0004111,5.28e-09,122;UBERON:0003056,9.08e-09,49;UBERON:0004733,5.96e-08,6;UBERON:0004732,5.96e-08,6;UBERON:0002028,5.96e-08,6;UBERON:0007277,5.96e-08,6;UBERON:0000956,1.87e-07,21;UBERON:0001869,1.87e-07,21;UBERON:0000203,1.87e-07,21;UBERON:0011216,2.34e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.829516898467821,0.945041568321835,1.05162480675691,1.42825492201902,1.32521124570968,0.857435594504678,0.862609239164127,0,1.10115880999389,2.68143409978894,2.91852413186863,4.3522474950964,3.11057988248193,1.04182674111352,1.3959149950069,0,2.44477196442896,3.24091444021034,1.56608848879013,2.42319279572891,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,2.72280718857492,0,0,0,0,0.599162557619291,0.457500602818626,1.50785222535437,1.04294592115366,2.04572365864264,0.62336413367868,0.973447578406546,0.203678727700633,0,0,0,0.390361328888111,0,0.180062129805349,0.753524089178575,0.408218994907967,0.896796041993948,0.937017245597288,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.243206428637567,0,0,0,1.26173969138476,2.6755199218614,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.40654023910644,0.491804836130026,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0.566153061577665,0,0,0,0.321321316421807,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,1.54667864109319,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,1.81256963593682,0,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0,0.412070114477788,1.60459604795908,0.505394423527595,0,0,0.280924522409647,0.640251524048693,0.746661096422973,0,0.463537303779422,0.578727661391115,0,0.588795680537589,0,0,0.238436189947321,0.581385666529314,0.282328141245992,0.592302255241736,0.914639864363863,0,0.271608227691724,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.661774257358546,0 | |||
|short_description=p14@Trim2 | |||
}} |
Revision as of 02:39, 14 September 2013
Short description: | p14@Trim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Trim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000128574_5end |
EntrezGene: | Trim2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.40e-30 | 23 |
neuroblast (sensu Vertebrata) | 7.40e-30 | 23 |
neuron | 9.22e-20 | 33 |
neuronal stem cell | 9.22e-20 | 33 |
neuroblast | 9.22e-20 | 33 |
electrically signaling cell | 9.22e-20 | 33 |
electrically responsive cell | 3.44e-16 | 39 |
electrically active cell | 3.44e-16 | 39 |
neural cell | 2.30e-14 | 43 |
ectodermal cell | 5.85e-14 | 44 |
neurectodermal cell | 5.85e-14 | 44 |
neuron of the ventral spinal cord | 4.09e-10 | 3 |
striatum neuron | 8.11e-10 | 3 |
raphe nuclei neuron | 9.29e-10 | 3 |
embryonic cell | 1.61e-07 | 70 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.