FFCP PHASE1:Mm9::chr1:74342572..74342575,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=210|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:74342572..74342575,+|id=chr1:74342572..74342575,+|ontology_enrichment_celltype=CL:0000107!4.27e-10!9;CL:0002563!6.42e-10!9;CL:0002251!6.42e-10!9;CL:0002321!3.72e-09!70;CL:0000220!3.72e-09!70;CL:0002076!6.46e-09!15;CL:0000066!6.90e-09!25;CL:0000144!5.48e-08!121;CL:0000012!5.48e-08!121;CL:0000075!1.28e-07!7;CL:0000239!4.37e-07!6;CL:0000677!4.37e-07!6;CL:0000212!4.37e-07!6;CL:0000584!4.37e-07!6;CL:0000223!4.46e-07!20;CL:0000548!5.72e-07!115;CL:0000004!5.72e-07!115;CL:0000255!5.72e-07!115|ontology_enrichment_celltype_v019_2=CL:0000107,1.39e-20,9;CL:0002563,8.66e-20,9;CL:0002251,8.66e-20,9;CL:0002321,5.56e-13,70;CL:0002250,1.12e-11,3;CL:0002076,1.42e-11,15;CL:0000223,3.16e-11,20;CL:0000066,4.73e-11,25;CL:0000239,1.91e-10,6;CL:0000677,1.91e-10,6;CL:0000584,1.91e-10,6;CL:0000075,5.67e-09,7;CL:0000034,9.09e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.77e-12!15;UBERON:0001242!8.40e-11!13;UBERON:0000060!8.40e-11!13;UBERON:0001262!8.40e-11!13;UBERON:0004786!8.40e-11!13;UBERON:0000485!1.15e-10!11;UBERON:0002410!4.27e-10!9;UBERON:0003350!6.42e-10!9;UBERON:0004808!6.42e-10!9;UBERON:0001277!6.42e-10!9;UBERON:0004923!1.24e-09!24;UBERON:0000010!2.25e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.39e-20,9;UBERON:0003350,8.66e-20,9;UBERON:0004808,8.66e-20,9;UBERON:0001277,8.66e-20,9;UBERON:0000010,1.06e-16,11;UBERON:0000485,4.66e-16,11;UBERON:0001242,1.80e-13,13;UBERON:0001262,1.80e-13,13;UBERON:0004786,1.80e-13,13;UBERON:0000011,4.98e-13,3;UBERON:0000013,6.65e-12,3;UBERON:0000344,1.42e-11,15;UBERON:0004923,6.15e-07,24|phase1_expression=0.160148847104794,0.697950815278722,1.81999695755814,1.81478526784098,1.00179145989269,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,0,1.29228598847722,0.861884930743556,0,0.504060259519861,0.665191531965914,0,0,0,1.44425809875637,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0.881277725829041,1.31790010585369,0.183546752161682,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.856952953211411,0.441737081903227,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0.302286240427142,4.34796733052517,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0.70667914902068,0.281686839553361,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0.884610551949874,0,0.220841518460394,0,0,0,0.209446706813455,0,3.11519323715393,0.599902730993408,1.52484272487678,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0,0.281105173679186,0,0,0,0,0,0.278047249225598,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0.252470927204373,0.94652465824877,0.390438744296638,1.29254038639679,1.91175038362042,2.45078541490634,1.98153571552183,1.21443210502468,1.16902343164525,1.97643888973262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0.441056796109924,0.16488625294148,0.484393280087717,0.0603129249281559,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0,0,6.11922347977879,4.19854356970974,1.79659965945751,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr1:74342572..74342575,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=210 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:74342572..74342575,+ | |||
|id=chr1:74342572..74342575,+ | |||
|ontology_enrichment_celltype=CL:0000107!4.27e-10!9;CL:0002563!6.42e-10!9;CL:0002251!6.42e-10!9;CL:0002321!3.72e-09!70;CL:0000220!3.72e-09!70;CL:0002076!6.46e-09!15;CL:0000066!6.90e-09!25;CL:0000144!5.48e-08!121;CL:0000012!5.48e-08!121;CL:0000075!1.28e-07!7;CL:0000239!4.37e-07!6;CL:0000677!4.37e-07!6;CL:0000212!4.37e-07!6;CL:0000584!4.37e-07!6;CL:0000223!4.46e-07!20;CL:0000548!5.72e-07!115;CL:0000004!5.72e-07!115;CL:0000255!5.72e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.39e-20,9;CL:0002563,8.66e-20,9;CL:0002251,8.66e-20,9;CL:0002321,5.56e-13,70;CL:0002250,1.12e-11,3;CL:0002076,1.42e-11,15;CL:0000223,3.16e-11,20;CL:0000066,4.73e-11,25;CL:0000239,1.91e-10,6;CL:0000677,1.91e-10,6;CL:0000584,1.91e-10,6;CL:0000075,5.67e-09,7;CL:0000034,9.09e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.77e-12!15;UBERON:0001242!8.40e-11!13;UBERON:0000060!8.40e-11!13;UBERON:0001262!8.40e-11!13;UBERON:0004786!8.40e-11!13;UBERON:0000485!1.15e-10!11;UBERON:0002410!4.27e-10!9;UBERON:0003350!6.42e-10!9;UBERON:0004808!6.42e-10!9;UBERON:0001277!6.42e-10!9;UBERON:0004923!1.24e-09!24;UBERON:0000010!2.25e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.39e-20,9;UBERON:0003350,8.66e-20,9;UBERON:0004808,8.66e-20,9;UBERON:0001277,8.66e-20,9;UBERON:0000010,1.06e-16,11;UBERON:0000485,4.66e-16,11;UBERON:0001242,1.80e-13,13;UBERON:0001262,1.80e-13,13;UBERON:0004786,1.80e-13,13;UBERON:0000011,4.98e-13,3;UBERON:0000013,6.65e-12,3;UBERON:0000344,1.42e-11,15;UBERON:0004923,6.15e-07,24 | |||
|phase1_expression=0.160148847104794,0.697950815278722,1.81999695755814,1.81478526784098,1.00179145989269,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,0,1.29228598847722,0.861884930743556,0,0.504060259519861,0.665191531965914,0,0,0,1.44425809875637,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0.881277725829041,1.31790010585369,0.183546752161682,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.856952953211411,0.441737081903227,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0.302286240427142,4.34796733052517,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0.70667914902068,0.281686839553361,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0.884610551949874,0,0.220841518460394,0,0,0,0.209446706813455,0,3.11519323715393,0.599902730993408,1.52484272487678,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0,0.281105173679186,0,0,0,0,0,0.278047249225598,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0.252470927204373,0.94652465824877,0.390438744296638,1.29254038639679,1.91175038362042,2.45078541490634,1.98153571552183,1.21443210502468,1.16902343164525,1.97643888973262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0.441056796109924,0.16488625294148,0.484393280087717,0.0603129249281559,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0,0,6.11922347977879,4.19854356970974,1.79659965945751,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr1:74342572..74342575,+ | |||
}} |
Revision as of 20:55, 13 September 2013
Short description: | p@chr1:74342572..74342575, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:74342572..74342575, + |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.39e-20 | 9 |
intestinal epithelial cell | 8.66e-20 | 9 |
epithelial cell of alimentary canal | 8.66e-20 | 9 |
embryonic cell | 5.56e-13 | 70 |
intestinal crypt stem cell | 1.12e-11 | 3 |
endo-epithelial cell | 1.42e-11 | 15 |
endodermal cell | 3.16e-11 | 20 |
epithelial cell | 4.73e-11 | 25 |
brush border epithelial cell | 1.91e-10 | 6 |
gut absorptive cell | 1.91e-10 | 6 |
enterocyte | 1.91e-10 | 6 |
columnar/cuboidal epithelial cell | 5.67e-09 | 7 |
stem cell | 9.09e-09 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.39e-20 | 9 |
epithelium of mucosa | 8.66e-20 | 9 |
gastrointestinal system epithelium | 8.66e-20 | 9 |
intestinal epithelium | 8.66e-20 | 9 |
peripheral nervous system | 1.06e-16 | 11 |
simple columnar epithelium | 4.66e-16 | 11 |
intestinal mucosa | 1.80e-13 | 13 |
wall of intestine | 1.80e-13 | 13 |
gastrointestinal system mucosa | 1.80e-13 | 13 |
parasympathetic nervous system | 4.98e-13 | 3 |
sympathetic nervous system | 6.65e-12 | 3 |
mucosa | 1.42e-11 | 15 |
organ component layer | 6.15e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.