FFCP PHASE1:Mm9::chr1:75438947..75438964,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=248|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:75438947..75438964,+|id=chr1:75438947..75438964,+|ontology_enrichment_celltype=CL:0000197!5.81e-08!2;CL:0002491!5.81e-08!2;CL:0000098!5.81e-08!2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!3.02e-24!8;UBERON:0003296!3.02e-24!8;UBERON:0010133!3.02e-24!8;UBERON:0001894!3.18e-19!10;UBERON:0006222!3.18e-19!10;UBERON:0003465!5.81e-08!2;UBERON:0008193!5.81e-08!2;UBERON:0000032!5.81e-08!2;UBERON:0005744!5.81e-08!2;UBERON:0008001!5.81e-08!2;UBERON:0007497!5.81e-08!2;UBERON:0009955!5.81e-08!2;UBERON:0003067!5.81e-08!2;UBERON:0002546!5.81e-08!2;UBERON:0007914!5.81e-08!2;UBERON:0003457!5.81e-08!2;UBERON:0004766!5.81e-08!2;UBERON:0005253!5.81e-08!2;UBERON:0002227!5.81e-08!2;UBERON:0001846!5.81e-08!2;UBERON:0003128!5.81e-08!2;UBERON:0002241!5.81e-08!2;UBERON:0002105!5.81e-08!2;UBERON:0001678!5.81e-08!2;UBERON:0003129!5.81e-08!2;UBERON:0001694!5.81e-08!2;UBERON:0004681!5.81e-08!2;UBERON:0001839!5.81e-08!2;UBERON:0001690!5.81e-08!2;UBERON:0001844!5.81e-08!2;UBERON:0001849!5.81e-08!2;UBERON:0002499!5.81e-08!2;UBERON:0005944!5.81e-08!2;UBERON:0001855!5.81e-08!2;UBERON:0001703!5.81e-08!2;UBERON:0003069!5.81e-08!2;UBERON:0003051!5.81e-08!2;UBERON:0004288!5.81e-08!2;UBERON:0004637!5.81e-08!2;UBERON:0004761!5.81e-08!2;UBERON:0010113!5.81e-08!2;UBERON:0003089!5.81e-08!2;UBERON:0009123!5.81e-08!2;UBERON:0009617!5.81e-08!2;UBERON:0005641!5.81e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.18e-67,8;UBERON:0003296,9.18e-67,8;UBERON:0010133,9.18e-67,8;UBERON:0001894,1.74e-53,10;UBERON:0006222,1.74e-53,10;UBERON:0002780,7.88e-14,39;UBERON:0001890,7.88e-14,39;UBERON:0006240,7.88e-14,39;UBERON:0003080,1.75e-13,40;UBERON:0002616,1.00e-11,46;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0003056,5.25e-11,49;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0000073,5.55e-10,54;UBERON:0002368,5.62e-09,60;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0002530,2.81e-08,65;UBERON:0000949,1.85e-07,72;UBERON:0010371,2.35e-07,73;UBERON:0001017,2.35e-07,73;UBERON:0001016,3.72e-07,75|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12791290356818,0,1.16422815404479,3.64372959553707,7.80297028026004,6.24290861607247,4.93647061806363,3.04464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:75438947..75438964,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=248 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:75438947..75438964,+ | |||
|id=chr1:75438947..75438964,+ | |||
|ontology_enrichment_celltype=CL:0000197!5.81e-08!2;CL:0002491!5.81e-08!2;CL:0000098!5.81e-08!2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!3.02e-24!8;UBERON:0003296!3.02e-24!8;UBERON:0010133!3.02e-24!8;UBERON:0001894!3.18e-19!10;UBERON:0006222!3.18e-19!10;UBERON:0003465!5.81e-08!2;UBERON:0008193!5.81e-08!2;UBERON:0000032!5.81e-08!2;UBERON:0005744!5.81e-08!2;UBERON:0008001!5.81e-08!2;UBERON:0007497!5.81e-08!2;UBERON:0009955!5.81e-08!2;UBERON:0003067!5.81e-08!2;UBERON:0002546!5.81e-08!2;UBERON:0007914!5.81e-08!2;UBERON:0003457!5.81e-08!2;UBERON:0004766!5.81e-08!2;UBERON:0005253!5.81e-08!2;UBERON:0002227!5.81e-08!2;UBERON:0001846!5.81e-08!2;UBERON:0003128!5.81e-08!2;UBERON:0002241!5.81e-08!2;UBERON:0002105!5.81e-08!2;UBERON:0001678!5.81e-08!2;UBERON:0003129!5.81e-08!2;UBERON:0001694!5.81e-08!2;UBERON:0004681!5.81e-08!2;UBERON:0001839!5.81e-08!2;UBERON:0001690!5.81e-08!2;UBERON:0001844!5.81e-08!2;UBERON:0001849!5.81e-08!2;UBERON:0002499!5.81e-08!2;UBERON:0005944!5.81e-08!2;UBERON:0001855!5.81e-08!2;UBERON:0001703!5.81e-08!2;UBERON:0003069!5.81e-08!2;UBERON:0003051!5.81e-08!2;UBERON:0004288!5.81e-08!2;UBERON:0004637!5.81e-08!2;UBERON:0004761!5.81e-08!2;UBERON:0010113!5.81e-08!2;UBERON:0003089!5.81e-08!2;UBERON:0009123!5.81e-08!2;UBERON:0009617!5.81e-08!2;UBERON:0005641!5.81e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.18e-67,8;UBERON:0003296,9.18e-67,8;UBERON:0010133,9.18e-67,8;UBERON:0001894,1.74e-53,10;UBERON:0006222,1.74e-53,10;UBERON:0002780,7.88e-14,39;UBERON:0001890,7.88e-14,39;UBERON:0006240,7.88e-14,39;UBERON:0003080,1.75e-13,40;UBERON:0002616,1.00e-11,46;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0003056,5.25e-11,49;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0000073,5.55e-10,54;UBERON:0002368,5.62e-09,60;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0002530,2.81e-08,65;UBERON:0000949,1.85e-07,72;UBERON:0010371,2.35e-07,73;UBERON:0001017,2.35e-07,73;UBERON:0001016,3.72e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12791290356818,0,1.16422815404479,3.64372959553707,7.80297028026004,6.24290861607247,4.93647061806363,3.04464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:75438947..75438964,+ | |||
}} |
Revision as of 21:00, 13 September 2013
Short description: | p@chr1:75438947..75438964, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:75438947..75438964, + |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.18e-67 | 8 |
gland of diencephalon | 9.18e-67 | 8 |
neuroendocrine gland | 9.18e-67 | 8 |
diencephalon | 1.74e-53 | 10 |
future diencephalon | 1.74e-53 | 10 |
regional part of forebrain | 7.88e-14 | 39 |
forebrain | 7.88e-14 | 39 |
future forebrain | 7.88e-14 | 39 |
anterior neural tube | 1.75e-13 | 40 |
regional part of brain | 1.00e-11 | 46 |
brain | 1.78e-11 | 47 |
future brain | 1.78e-11 | 47 |
pre-chordal neural plate | 5.25e-11 | 49 |
neural tube | 2.28e-10 | 52 |
neural rod | 2.28e-10 | 52 |
future spinal cord | 2.28e-10 | 52 |
neural keel | 2.28e-10 | 52 |
regional part of nervous system | 5.55e-10 | 54 |
endocrine gland | 5.62e-09 | 60 |
neurectoderm | 2.08e-08 | 64 |
neural plate | 2.08e-08 | 64 |
presumptive neural plate | 2.08e-08 | 64 |
gland | 2.81e-08 | 65 |
endocrine system | 1.85e-07 | 72 |
ecto-epithelium | 2.35e-07 | 73 |
central nervous system | 2.35e-07 | 73 |
nervous system | 3.72e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.