FFCP PHASE1:Mm9::chr8:122701320..122701335,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=436062|HGNC=|MCL_coexpression_id=477|UniProt=G3UYC8|association_with_transcript=0bp_to_ENSMUST00000135567_5end|description=CAGE_peak_1_at_Fam92b_5end|id=chr8:122701320..122701335,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,2.22e-11,8;CL:0000333,7.65e-09,10;CL:0000095,7.65e-09,10;CL:0000243,7.65e-09,10;CL:0000123,7.65e-09,10;CL:0000125,7.65e-09,10;CL:0000030,7.65e-09,10;CL:0000339,7.65e-09,10;CL:0000128,2.83e-08,6;CL:0000126,2.83e-08,6;CL:0000127,2.83e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.87e-14!102;UBERON:0000924!6.87e-14!102;UBERON:0006601!6.87e-14!102;UBERON:0002346!1.36e-13!71;UBERON:0003075!1.36e-13!71;UBERON:0007284!1.36e-13!71;UBERON:0001017!4.67e-11!73;UBERON:0005743!4.67e-11!73;UBERON:0000073!2.82e-10!75;UBERON:0001016!2.82e-10!75;UBERON:0000033!1.15e-09!63;UBERON:0001894!2.29e-08!10;UBERON:0006222!2.29e-08!10;UBERON:0000007!4.03e-08!8;UBERON:0003296!4.03e-08!8;UBERON:0010133!4.03e-08!8;UBERON:0003056!5.20e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.50e-16,8;UBERON:0003296,1.50e-16,8;UBERON:0010133,1.50e-16,8;UBERON:0001894,7.24e-13,10;UBERON:0006222,7.24e-13,10;UBERON:0004121,1.15e-11,95;UBERON:0000924,1.15e-11,95;UBERON:0006601,1.15e-11,95;UBERON:0000020,3.86e-11,12;UBERON:0001032,3.86e-11,12;UBERON:0004456,3.86e-11,12;UBERON:0010314,6.25e-11,92;UBERON:0002346,3.24e-10,64;UBERON:0003075,3.24e-10,64;UBERON:0007284,3.24e-10,64;UBERON:0010371,3.26e-10,73;UBERON:0000033,3.90e-10,13;UBERON:0005085,3.90e-10,13;UBERON:0003056,7.95e-10,49;UBERON:0000970,1.99e-09,9;UBERON:0000019,1.99e-09,9;UBERON:0000047,1.99e-09,9;UBERON:0010312,1.99e-09,9;UBERON:0004088,1.99e-09,9;UBERON:0002104,1.99e-09,9;UBERON:0001456,1.99e-09,9;UBERON:0003072,1.99e-09,9;UBERON:0004128,1.99e-09,9;UBERON:0003071,1.99e-09,9;UBERON:0001017,3.87e-08,73;UBERON:0001016,9.09e-08,75;UBERON:0001444,1.71e-07,11|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,2.85592037554813,2.3331587888914,2.51975558925653,7.18762821824858,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,1.49800055259202,9.60545763303886,0,0,0,0,0.662605622854841,0,0.0958454710182364,0,0,0.766124028511126,1.22885226604995,0.263772575460388,0.365950574409639,1.56274011167028,0.837548997004143,0.56276261003168,0.45839474333043,1.17851434189467,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,2.08182392119363,1.52232739156071,1.38369298353635,1.05505848386836,0.587943535678524,0.753999547978053,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0.648965052271031,0.101839363850316,0,0,0,2.73252930221678,2.98872735763515,2.70093194708024,2.56198190320716,2.31324097114515,1.92170580427275,1.12442069471675,0.776110112217047,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0.210289948564127,0.92614151141356,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,1.79763881730844,0,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0645701836653,0.189491411770485,0,0,0.938760993154008,0.837531287209079,1.90434912708811,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,1.63863314715738,1.03610989119537,1.01254341007058,0,0,0,0,0.321101179975584,0,0,0,0.631016438832513,0,2.15423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,1.16902343164525,0.395287777946524,0.963963949265421,1.56134093729095,0.178065603667255,0,1.97964147567043,1.32745138339963,0.971122544619926,1.209294227859,1.13163047853539,1.47650946440386,0.614870295887855,1.29214146584111,1.45413491791002,0,0.948110273807448,0,0,18.3837387107046,7.0223826672211,16.1698354728443,12.0028739617692,17.3793428969428,18.9070946658195,16.4549020602121,10.9607381681256,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.324016022465404,0.836353184057875,0.218362563746178,0.404593039154462,0.41326727862668,0,0.129614973291793,0,0,0.149516546043979,0,0,0.387479470433193,0.337912250981556,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,0,0,0,0,0,0,0,0,0,0.830298780673413,0,0.682934423016537,0,0.209613162627982,0.551530525350042,0.888986911206461,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0.37456602987953,0.576226371643824,0.746661096422973,0,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0,0.953744759789284,0.726732083161643,0.470546902076653,0.507687647350059,0.365855945745545,1.05227884575137,0.135804113845862,1.12228454331548,0.711810108745045,0.689531376628944,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.935726433781634,0.214871054048298,0,0,0.231867835620421|short_description=p1@Fam92b}} | ||
|EntrezGene=436062 | |||
|HGNC= | |||
|MCL_coexpression_id=477 | |||
|UniProt=G3UYC8 | |||
|association_with_transcript=0bp_to_ENSMUST00000135567_5end | |||
|description=CAGE_peak_1_at_Fam92b_5end | |||
|id=chr8:122701320..122701335,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.22e-11,8;CL:0000333,7.65e-09,10;CL:0000095,7.65e-09,10;CL:0000243,7.65e-09,10;CL:0000123,7.65e-09,10;CL:0000125,7.65e-09,10;CL:0000030,7.65e-09,10;CL:0000339,7.65e-09,10;CL:0000128,2.83e-08,6;CL:0000126,2.83e-08,6;CL:0000127,2.83e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.87e-14!102;UBERON:0000924!6.87e-14!102;UBERON:0006601!6.87e-14!102;UBERON:0002346!1.36e-13!71;UBERON:0003075!1.36e-13!71;UBERON:0007284!1.36e-13!71;UBERON:0001017!4.67e-11!73;UBERON:0005743!4.67e-11!73;UBERON:0000073!2.82e-10!75;UBERON:0001016!2.82e-10!75;UBERON:0000033!1.15e-09!63;UBERON:0001894!2.29e-08!10;UBERON:0006222!2.29e-08!10;UBERON:0000007!4.03e-08!8;UBERON:0003296!4.03e-08!8;UBERON:0010133!4.03e-08!8;UBERON:0003056!5.20e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.50e-16,8;UBERON:0003296,1.50e-16,8;UBERON:0010133,1.50e-16,8;UBERON:0001894,7.24e-13,10;UBERON:0006222,7.24e-13,10;UBERON:0004121,1.15e-11,95;UBERON:0000924,1.15e-11,95;UBERON:0006601,1.15e-11,95;UBERON:0000020,3.86e-11,12;UBERON:0001032,3.86e-11,12;UBERON:0004456,3.86e-11,12;UBERON:0010314,6.25e-11,92;UBERON:0002346,3.24e-10,64;UBERON:0003075,3.24e-10,64;UBERON:0007284,3.24e-10,64;UBERON:0010371,3.26e-10,73;UBERON:0000033,3.90e-10,13;UBERON:0005085,3.90e-10,13;UBERON:0003056,7.95e-10,49;UBERON:0000970,1.99e-09,9;UBERON:0000019,1.99e-09,9;UBERON:0000047,1.99e-09,9;UBERON:0010312,1.99e-09,9;UBERON:0004088,1.99e-09,9;UBERON:0002104,1.99e-09,9;UBERON:0001456,1.99e-09,9;UBERON:0003072,1.99e-09,9;UBERON:0004128,1.99e-09,9;UBERON:0003071,1.99e-09,9;UBERON:0001017,3.87e-08,73;UBERON:0001016,9.09e-08,75;UBERON:0001444,1.71e-07,11 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,2.85592037554813,2.3331587888914,2.51975558925653,7.18762821824858,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,1.49800055259202,9.60545763303886,0,0,0,0,0.662605622854841,0,0.0958454710182364,0,0,0.766124028511126,1.22885226604995,0.263772575460388,0.365950574409639,1.56274011167028,0.837548997004143,0.56276261003168,0.45839474333043,1.17851434189467,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,2.08182392119363,1.52232739156071,1.38369298353635,1.05505848386836,0.587943535678524,0.753999547978053,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0.648965052271031,0.101839363850316,0,0,0,2.73252930221678,2.98872735763515,2.70093194708024,2.56198190320716,2.31324097114515,1.92170580427275,1.12442069471675,0.776110112217047,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0.210289948564127,0.92614151141356,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,1.79763881730844,0,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0645701836653,0.189491411770485,0,0,0.938760993154008,0.837531287209079,1.90434912708811,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,1.63863314715738,1.03610989119537,1.01254341007058,0,0,0,0,0.321101179975584,0,0,0,0.631016438832513,0,2.15423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,1.16902343164525,0.395287777946524,0.963963949265421,1.56134093729095,0.178065603667255,0,1.97964147567043,1.32745138339963,0.971122544619926,1.209294227859,1.13163047853539,1.47650946440386,0.614870295887855,1.29214146584111,1.45413491791002,0,0.948110273807448,0,0,18.3837387107046,7.0223826672211,16.1698354728443,12.0028739617692,17.3793428969428,18.9070946658195,16.4549020602121,10.9607381681256,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.324016022465404,0.836353184057875,0.218362563746178,0.404593039154462,0.41326727862668,0,0.129614973291793,0,0,0.149516546043979,0,0,0.387479470433193,0.337912250981556,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,0,0,0,0,0,0,0,0,0,0.830298780673413,0,0.682934423016537,0,0.209613162627982,0.551530525350042,0.888986911206461,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0.37456602987953,0.576226371643824,0.746661096422973,0,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0,0.953744759789284,0.726732083161643,0.470546902076653,0.507687647350059,0.365855945745545,1.05227884575137,0.135804113845862,1.12228454331548,0.711810108745045,0.689531376628944,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.935726433781634,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p1@Fam92b | |||
}} |
Revision as of 14:57, 14 September 2013
Short description: | p1@Fam92b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam92b_5end |
Coexpression cluster: | MCL_coexpression_mm9:477 |
Association with transcript: | 0bp_to_ENSMUST00000135567_5end |
EntrezGene: | Fam92b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.22e-11 | 8 |
migratory neural crest cell | 7.65e-09 | 10 |
neuron associated cell | 7.65e-09 | 10 |
glial cell (sensu Vertebrata) | 7.65e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 7.65e-09 | 10 |
glial cell | 7.65e-09 | 10 |
glioblast | 7.65e-09 | 10 |
glioblast (sensu Vertebrata) | 7.65e-09 | 10 |
oligodendrocyte | 2.83e-08 | 6 |
macroglial cell | 2.83e-08 | 6 |
astrocyte | 2.83e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.50e-16 | 8 |
gland of diencephalon | 1.50e-16 | 8 |
neuroendocrine gland | 1.50e-16 | 8 |
diencephalon | 7.24e-13 | 10 |
future diencephalon | 7.24e-13 | 10 |
ectoderm-derived structure | 1.15e-11 | 95 |
ectoderm | 1.15e-11 | 95 |
presumptive ectoderm | 1.15e-11 | 95 |
sense organ | 3.86e-11 | 12 |
sensory system | 3.86e-11 | 12 |
entire sense organ system | 3.86e-11 | 12 |
structure with developmental contribution from neural crest | 6.25e-11 | 92 |
neurectoderm | 3.24e-10 | 64 |
neural plate | 3.24e-10 | 64 |
presumptive neural plate | 3.24e-10 | 64 |
ecto-epithelium | 3.26e-10 | 73 |
head | 3.90e-10 | 13 |
ectodermal placode | 3.90e-10 | 13 |
pre-chordal neural plate | 7.95e-10 | 49 |
eye | 1.99e-09 | 9 |
camera-type eye | 1.99e-09 | 9 |
simple eye | 1.99e-09 | 9 |
immature eye | 1.99e-09 | 9 |
ocular region | 1.99e-09 | 9 |
visual system | 1.99e-09 | 9 |
face | 1.99e-09 | 9 |
optic cup | 1.99e-09 | 9 |
optic vesicle | 1.99e-09 | 9 |
eye primordium | 1.99e-09 | 9 |
central nervous system | 3.87e-08 | 73 |
nervous system | 9.09e-08 | 75 |
subdivision of head | 1.71e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.