FFCP PHASE1:Mm9::chr2:34916951..34916967,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=15139|HGNC=|MCL_coexpression_id=8|UniProt=P06684|association_with_transcript=0bp_to_ENSMUST00000028233,NM_010406,uc008jjn.2_5end|description=CAGE_peak_2_at_Hc_5end|id=chr2:34916951..34916967,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.67e-24!22;UBERON:0007499!3.67e-24!22;UBERON:0006925!3.67e-24!22;UBERON:0009497!3.67e-24!22;UBERON:0000015!3.67e-24!22;UBERON:0002423!3.67e-24!22;UBERON:0006235!3.67e-24!22;UBERON:0008835!3.67e-24!22;UBERON:0003894!3.67e-24!22;UBERON:0004161!3.67e-24!22;UBERON:0008836!3.67e-24!22;UBERON:0009854!1.01e-22!23;UBERON:0009856!1.01e-22!23;UBERON:0002365!3.41e-20!25;UBERON:0002330!3.41e-20!25;UBERON:0009569!4.43e-18!66;UBERON:0005177!8.60e-14!85;UBERON:0005172!2.32e-13!49;UBERON:0005173!2.32e-13!49;UBERON:0002417!2.32e-13!49;UBERON:0000916!2.32e-13!49;UBERON:0005256!1.19e-12!47;UBERON:0000466!1.17e-10!79;UBERON:0002100!4.10e-10!98;UBERON:0005911!1.31e-09!69;UBERON:0001041!2.16e-09!92;UBERON:0000077!2.82e-08!97;UBERON:0002368!6.61e-08!60;UBERON:0003914!1.13e-07!47;UBERON:0000949!3.29e-07!72;UBERON:0002048!5.19e-07!14;UBERON:0000117!5.19e-07!14;UBERON:0000171!5.19e-07!14;UBERON:0000170!5.19e-07!14;UBERON:0005597!5.19e-07!14;UBERON:0000118!5.19e-07!14;UBERON:0003104!5.31e-07!131;UBERON:0009142!5.31e-07!131;UBERON:0005157!8.25e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.14e-29,22;UBERON:0007499,5.14e-29,22;UBERON:0006925,5.14e-29,22;UBERON:0009497,5.14e-29,22;UBERON:0000015,5.14e-29,22;UBERON:0002423,5.14e-29,22;UBERON:0006235,5.14e-29,22;UBERON:0008835,5.14e-29,22;UBERON:0003894,5.14e-29,22;UBERON:0004161,5.14e-29,22;UBERON:0008836,5.14e-29,22;UBERON:0009854,1.94e-27,23;UBERON:0009856,1.94e-27,23;UBERON:0002365,1.14e-24,25;UBERON:0002330,1.14e-24,25;UBERON:0009569,1.35e-15,66;UBERON:0005256,9.80e-13,45;UBERON:0005911,1.22e-12,69;UBERON:0001041,1.80e-11,80;UBERON:0005177,1.80e-11,79;UBERON:0005172,3.97e-11,49;UBERON:0005173,3.97e-11,49;UBERON:0002417,3.97e-11,49;UBERON:0000916,3.97e-11,49;UBERON:0003914,5.74e-10,47;UBERON:0002100,5.81e-09,90;UBERON:0002368,7.14e-08,60;UBERON:0003104,1.22e-07,61;UBERON:0009142,1.22e-07,61;UBERON:0003929,1.25e-07,55;UBERON:0002530,8.73e-07,65|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,49.044160987939,7.47968467078526,94.448058536618,146.199693925726,112.902775548529,22.8924404814756,0,0,0,0,0,0,0,0,0,0,47.7288617225671,0,0.29688427812965,0.173485326766136,0.913396434936424,1.15307748628029,0.60289056221049,1.05829836422134,0.753999547978053,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90422890701429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,59.2905254174298,3.67059232575407,3.93117990226406,8.31989815823959,10.7515864335907,13.2647437863829,14.0044218479781,24.4541716833189,33.5619919424323,43.3807032837169,123.640657613525,86.7088408067613,89.2427745107643,51.2735122232637,64.4036714543665,79.1207375035922,4.61882975416512,0,0,0,0.234690248288502,0.670025029767263,3.57065461329021,4.87834119644497,2.36452716159286,4.65075848262427,1.91345722388985,4.42430949732493,8.11619414769709,10.4147322178688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,1.75323650300267,6.94289028092822,0.26175594198403,0,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.853668028770671,0.972426868273176,0.838452650511929,1.47074806760011,1.77797382241292,2.26638562962784,0.320919209591815,1.76888048234658,2.02783439912192,2.82939512079114,2.71560371662659,3.90553429669703,2.69946704091382,2.38146845641537,2.54945517078682,2.89363830695558,2.06042950401653,1.61918812147837,1.37147700954166,3.01708870470874,2.86123427936785,1.59881058295561,1.97629698872194,1.09998990259179,2.0122077016005,1.57841826862706,3.25929873230068,2.24456908663095,1.06771516311757,1.37906275325789,2.45538625901814,2.63392630016142,3.47231899766054,0,1.63752125911786,4.94203424311086,0,1.10295709559758,0.463735671240843|short_description=p2@Hc}} | ||
|EntrezGene=15139 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=P06684 | |||
|association_with_transcript=0bp_to_ENSMUST00000028233,NM_010406,uc008jjn.2_5end | |||
|description=CAGE_peak_2_at_Hc_5end | |||
|id=chr2:34916951..34916967,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.67e-24!22;UBERON:0007499!3.67e-24!22;UBERON:0006925!3.67e-24!22;UBERON:0009497!3.67e-24!22;UBERON:0000015!3.67e-24!22;UBERON:0002423!3.67e-24!22;UBERON:0006235!3.67e-24!22;UBERON:0008835!3.67e-24!22;UBERON:0003894!3.67e-24!22;UBERON:0004161!3.67e-24!22;UBERON:0008836!3.67e-24!22;UBERON:0009854!1.01e-22!23;UBERON:0009856!1.01e-22!23;UBERON:0002365!3.41e-20!25;UBERON:0002330!3.41e-20!25;UBERON:0009569!4.43e-18!66;UBERON:0005177!8.60e-14!85;UBERON:0005172!2.32e-13!49;UBERON:0005173!2.32e-13!49;UBERON:0002417!2.32e-13!49;UBERON:0000916!2.32e-13!49;UBERON:0005256!1.19e-12!47;UBERON:0000466!1.17e-10!79;UBERON:0002100!4.10e-10!98;UBERON:0005911!1.31e-09!69;UBERON:0001041!2.16e-09!92;UBERON:0000077!2.82e-08!97;UBERON:0002368!6.61e-08!60;UBERON:0003914!1.13e-07!47;UBERON:0000949!3.29e-07!72;UBERON:0002048!5.19e-07!14;UBERON:0000117!5.19e-07!14;UBERON:0000171!5.19e-07!14;UBERON:0000170!5.19e-07!14;UBERON:0005597!5.19e-07!14;UBERON:0000118!5.19e-07!14;UBERON:0003104!5.31e-07!131;UBERON:0009142!5.31e-07!131;UBERON:0005157!8.25e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.14e-29,22;UBERON:0007499,5.14e-29,22;UBERON:0006925,5.14e-29,22;UBERON:0009497,5.14e-29,22;UBERON:0000015,5.14e-29,22;UBERON:0002423,5.14e-29,22;UBERON:0006235,5.14e-29,22;UBERON:0008835,5.14e-29,22;UBERON:0003894,5.14e-29,22;UBERON:0004161,5.14e-29,22;UBERON:0008836,5.14e-29,22;UBERON:0009854,1.94e-27,23;UBERON:0009856,1.94e-27,23;UBERON:0002365,1.14e-24,25;UBERON:0002330,1.14e-24,25;UBERON:0009569,1.35e-15,66;UBERON:0005256,9.80e-13,45;UBERON:0005911,1.22e-12,69;UBERON:0001041,1.80e-11,80;UBERON:0005177,1.80e-11,79;UBERON:0005172,3.97e-11,49;UBERON:0005173,3.97e-11,49;UBERON:0002417,3.97e-11,49;UBERON:0000916,3.97e-11,49;UBERON:0003914,5.74e-10,47;UBERON:0002100,5.81e-09,90;UBERON:0002368,7.14e-08,60;UBERON:0003104,1.22e-07,61;UBERON:0009142,1.22e-07,61;UBERON:0003929,1.25e-07,55;UBERON:0002530,8.73e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,49.044160987939,7.47968467078526,94.448058536618,146.199693925726,112.902775548529,22.8924404814756,0,0,0,0,0,0,0,0,0,0,47.7288617225671,0,0.29688427812965,0.173485326766136,0.913396434936424,1.15307748628029,0.60289056221049,1.05829836422134,0.753999547978053,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90422890701429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,59.2905254174298,3.67059232575407,3.93117990226406,8.31989815823959,10.7515864335907,13.2647437863829,14.0044218479781,24.4541716833189,33.5619919424323,43.3807032837169,123.640657613525,86.7088408067613,89.2427745107643,51.2735122232637,64.4036714543665,79.1207375035922,4.61882975416512,0,0,0,0.234690248288502,0.670025029767263,3.57065461329021,4.87834119644497,2.36452716159286,4.65075848262427,1.91345722388985,4.42430949732493,8.11619414769709,10.4147322178688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,1.75323650300267,6.94289028092822,0.26175594198403,0,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.853668028770671,0.972426868273176,0.838452650511929,1.47074806760011,1.77797382241292,2.26638562962784,0.320919209591815,1.76888048234658,2.02783439912192,2.82939512079114,2.71560371662659,3.90553429669703,2.69946704091382,2.38146845641537,2.54945517078682,2.89363830695558,2.06042950401653,1.61918812147837,1.37147700954166,3.01708870470874,2.86123427936785,1.59881058295561,1.97629698872194,1.09998990259179,2.0122077016005,1.57841826862706,3.25929873230068,2.24456908663095,1.06771516311757,1.37906275325789,2.45538625901814,2.63392630016142,3.47231899766054,0,1.63752125911786,4.94203424311086,0,1.10295709559758,0.463735671240843 | |||
|short_description=p2@Hc | |||
}} |
Revision as of 23:54, 13 September 2013
Short description: | p2@Hc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hc_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000028233, NM_010406, uc008jjn.2_5end |
EntrezGene: | Hc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 5.14e-29 | 22 |
epithelial sac | 5.14e-29 | 22 |
digestive gland | 5.14e-29 | 22 |
epithelium of foregut-midgut junction | 5.14e-29 | 22 |
anatomical boundary | 5.14e-29 | 22 |
hepatobiliary system | 5.14e-29 | 22 |
foregut-midgut junction | 5.14e-29 | 22 |
hepatic diverticulum | 5.14e-29 | 22 |
liver primordium | 5.14e-29 | 22 |
septum transversum | 5.14e-29 | 22 |
liver bud | 5.14e-29 | 22 |
digestive tract diverticulum | 1.94e-27 | 23 |
sac | 1.94e-27 | 23 |
exocrine gland | 1.14e-24 | 25 |
exocrine system | 1.14e-24 | 25 |
subdivision of trunk | 1.35e-15 | 66 |
trunk mesenchyme | 9.80e-13 | 45 |
endo-epithelium | 1.22e-12 | 69 |
foregut | 1.80e-11 | 80 |
trunk region element | 1.80e-11 | 79 |
abdomen element | 3.97e-11 | 49 |
abdominal segment element | 3.97e-11 | 49 |
abdominal segment of trunk | 3.97e-11 | 49 |
abdomen | 3.97e-11 | 49 |
epithelial tube | 5.74e-10 | 47 |
trunk | 5.81e-09 | 90 |
endocrine gland | 7.14e-08 | 60 |
mesenchyme | 1.22e-07 | 61 |
entire embryonic mesenchyme | 1.22e-07 | 61 |
gut epithelium | 1.25e-07 | 55 |
gland | 8.73e-07 | 65 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.