FFCP PHASE1:Mm9::chr10:28513342..28513350,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:28513342..28513350,+|id=chr10:28513342..28513350,+|ontology_enrichment_celltype=CL:0000815!7.23e-07!1;CL:0000792!7.23e-07!1;CL:0000624!7.55e-07!8|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.59e-42!23;UBERON:0000974!3.59e-42!23;UBERON:0004807!3.59e-42!23;UBERON:0005058!3.59e-42!23;UBERON:0003351!3.59e-42!23;UBERON:0009113!3.59e-42!23;UBERON:0003295!3.59e-42!23;UBERON:0009722!3.59e-42!23;UBERON:0005562!3.59e-42!23;UBERON:0007690!3.59e-42!23;UBERON:0006562!2.32e-40!24;UBERON:0003408!2.32e-40!24;UBERON:0001557!2.32e-40!24;UBERON:0001042!2.32e-40!24;UBERON:0008814!2.32e-40!24;UBERON:0009145!2.32e-40!24;UBERON:0000072!9.91e-36!27;UBERON:0004177!3.57e-33!29;UBERON:0000063!2.97e-27!35;UBERON:0000065!4.66e-23!41;UBERON:0001004!1.78e-22!42;UBERON:0002390!7.01e-21!45;UBERON:0003061!7.01e-21!45;UBERON:0002193!1.75e-19!48;UBERON:0005057!2.99e-18!51;UBERON:0003929!8.17e-17!55;UBERON:0002368!2.76e-15!60;UBERON:0002530!5.43e-14!65;UBERON:0000490!9.35e-14!66;UBERON:0005911!4.34e-13!69;UBERON:0002405!7.02e-13!70;UBERON:0000949!1.77e-12!72;UBERON:0007811!3.49e-10!86;UBERON:0003081!6.49e-10!88;UBERON:0001041!2.07e-09!92;UBERON:0000153!3.56e-09!94;UBERON:0000077!7.71e-09!97;UBERON:0000064!1.26e-08!99|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.24e-12,23;UBERON:0000974,2.24e-12,23;UBERON:0004807,2.24e-12,23;UBERON:0005058,2.24e-12,23;UBERON:0003351,2.24e-12,23;UBERON:0009113,2.24e-12,23;UBERON:0003295,2.24e-12,23;UBERON:0009722,2.24e-12,23;UBERON:0005562,2.24e-12,23;UBERON:0007690,2.24e-12,23;UBERON:0006562,6.63e-12,24;UBERON:0003408,6.63e-12,24;UBERON:0001557,6.63e-12,24;UBERON:0001042,6.63e-12,24;UBERON:0008814,6.63e-12,24;UBERON:0009145,6.63e-12,24;UBERON:0000072,1.06e-10,27;UBERON:0004177,4.90e-10,29;UBERON:0005057,4.90e-10,29;UBERON:0000077,1.72e-08,35;UBERON:0007811,2.78e-08,36;UBERON:0000065,2.16e-07,41;UBERON:0001004,3.07e-07,42;UBERON:0000153,4.30e-07,43;UBERON:0002390,8.07e-07,45;UBERON:0003061,8.07e-07,45|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.51968329191118,0,0,0.360586348559907,0.738447635872886,0.504832249740738,0.533447646584999,1.91569751759997,0.877120926657772,1.05833025804362,1.5193997283604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:28513342..28513350,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:28513342..28513350,+ | |||
|id=chr10:28513342..28513350,+ | |||
|ontology_enrichment_celltype=CL:0000815!7.23e-07!1;CL:0000792!7.23e-07!1;CL:0000624!7.55e-07!8 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.59e-42!23;UBERON:0000974!3.59e-42!23;UBERON:0004807!3.59e-42!23;UBERON:0005058!3.59e-42!23;UBERON:0003351!3.59e-42!23;UBERON:0009113!3.59e-42!23;UBERON:0003295!3.59e-42!23;UBERON:0009722!3.59e-42!23;UBERON:0005562!3.59e-42!23;UBERON:0007690!3.59e-42!23;UBERON:0006562!2.32e-40!24;UBERON:0003408!2.32e-40!24;UBERON:0001557!2.32e-40!24;UBERON:0001042!2.32e-40!24;UBERON:0008814!2.32e-40!24;UBERON:0009145!2.32e-40!24;UBERON:0000072!9.91e-36!27;UBERON:0004177!3.57e-33!29;UBERON:0000063!2.97e-27!35;UBERON:0000065!4.66e-23!41;UBERON:0001004!1.78e-22!42;UBERON:0002390!7.01e-21!45;UBERON:0003061!7.01e-21!45;UBERON:0002193!1.75e-19!48;UBERON:0005057!2.99e-18!51;UBERON:0003929!8.17e-17!55;UBERON:0002368!2.76e-15!60;UBERON:0002530!5.43e-14!65;UBERON:0000490!9.35e-14!66;UBERON:0005911!4.34e-13!69;UBERON:0002405!7.02e-13!70;UBERON:0000949!1.77e-12!72;UBERON:0007811!3.49e-10!86;UBERON:0003081!6.49e-10!88;UBERON:0001041!2.07e-09!92;UBERON:0000153!3.56e-09!94;UBERON:0000077!7.71e-09!97;UBERON:0000064!1.26e-08!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.24e-12,23;UBERON:0000974,2.24e-12,23;UBERON:0004807,2.24e-12,23;UBERON:0005058,2.24e-12,23;UBERON:0003351,2.24e-12,23;UBERON:0009113,2.24e-12,23;UBERON:0003295,2.24e-12,23;UBERON:0009722,2.24e-12,23;UBERON:0005562,2.24e-12,23;UBERON:0007690,2.24e-12,23;UBERON:0006562,6.63e-12,24;UBERON:0003408,6.63e-12,24;UBERON:0001557,6.63e-12,24;UBERON:0001042,6.63e-12,24;UBERON:0008814,6.63e-12,24;UBERON:0009145,6.63e-12,24;UBERON:0000072,1.06e-10,27;UBERON:0004177,4.90e-10,29;UBERON:0005057,4.90e-10,29;UBERON:0000077,1.72e-08,35;UBERON:0007811,2.78e-08,36;UBERON:0000065,2.16e-07,41;UBERON:0001004,3.07e-07,42;UBERON:0000153,4.30e-07,43;UBERON:0002390,8.07e-07,45;UBERON:0003061,8.07e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.51968329191118,0,0,0.360586348559907,0.738447635872886,0.504832249740738,0.533447646584999,1.91569751759997,0.877120926657772,1.05833025804362,1.5193997283604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:28513342..28513350,+ | |||
}} |
Revision as of 16:32, 12 September 2013
Short description: | p@chr10:28513342..28513350, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28513342..28513350, + |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.24e-12 | 23 |
neck | 2.24e-12 | 23 |
respiratory system epithelium | 2.24e-12 | 23 |
hemolymphoid system gland | 2.24e-12 | 23 |
pharyngeal epithelium | 2.24e-12 | 23 |
thymic region | 2.24e-12 | 23 |
pharyngeal gland | 2.24e-12 | 23 |
entire pharyngeal arch endoderm | 2.24e-12 | 23 |
thymus primordium | 2.24e-12 | 23 |
early pharyngeal endoderm | 2.24e-12 | 23 |
pharynx | 6.63e-12 | 24 |
gland of gut | 6.63e-12 | 24 |
upper respiratory tract | 6.63e-12 | 24 |
chordate pharynx | 6.63e-12 | 24 |
pharyngeal arch system | 6.63e-12 | 24 |
pharyngeal region of foregut | 6.63e-12 | 24 |
segment of respiratory tract | 1.06e-10 | 27 |
hemopoietic organ | 4.90e-10 | 29 |
immune organ | 4.90e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.72e-08 | 35 |
craniocervical region | 2.78e-08 | 36 |
respiratory tract | 2.16e-07 | 41 |
respiratory system | 3.07e-07 | 42 |
anterior region of body | 4.30e-07 | 43 |
hematopoietic system | 8.07e-07 | 45 |
blood island | 8.07e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.