Personal tools

FFCP PHASE1:Mm9::chr16:18426493..18426502,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=26462|HGNC=|MCL_coexpression_id=8|UniProt=D3Z0K8,Q9JLT4|association_with_transcript=-7bp_to_ENSMUST00000115605,ENSMUST00000115606,NM_013711,uc007ynx.1,uc007yny.1,uc012acg.1_5end|description=CAGE_peak_2_at_Txnrd2_5end|id=chr16:18426493..18426502,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,4.72e-16,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.09e-11!49;UBERON:0005173!1.09e-11!49;UBERON:0002417!1.09e-11!49;UBERON:0000916!1.09e-11!49;UBERON:0002107!8.01e-11!22;UBERON:0007499!8.01e-11!22;UBERON:0006925!8.01e-11!22;UBERON:0009497!8.01e-11!22;UBERON:0000015!8.01e-11!22;UBERON:0002423!8.01e-11!22;UBERON:0006235!8.01e-11!22;UBERON:0008835!8.01e-11!22;UBERON:0003894!8.01e-11!22;UBERON:0004161!8.01e-11!22;UBERON:0008836!8.01e-11!22;UBERON:0009854!6.67e-10!23;UBERON:0009856!6.67e-10!23;UBERON:0002365!3.23e-09!25;UBERON:0002330!3.23e-09!25;UBERON:0009569!4.26e-07!66;UBERON:0005256!4.71e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.95e-31,22;UBERON:0007499,3.95e-31,22;UBERON:0006925,3.95e-31,22;UBERON:0009497,3.95e-31,22;UBERON:0000015,3.95e-31,22;UBERON:0002423,3.95e-31,22;UBERON:0006235,3.95e-31,22;UBERON:0008835,3.95e-31,22;UBERON:0003894,3.95e-31,22;UBERON:0004161,3.95e-31,22;UBERON:0008836,3.95e-31,22;UBERON:0009854,1.05e-29,23;UBERON:0009856,1.05e-29,23;UBERON:0002365,3.39e-27,25;UBERON:0002330,3.39e-27,25;UBERON:0005172,6.05e-24,49;UBERON:0005173,6.05e-24,49;UBERON:0002417,6.05e-24,49;UBERON:0000916,6.05e-24,49;UBERON:0005256,4.96e-23,45;UBERON:0003104,8.33e-19,61;UBERON:0009142,8.33e-19,61;UBERON:0009569,3.26e-17,66;UBERON:0002368,9.62e-17,60;UBERON:0005177,5.41e-16,79;UBERON:0000949,1.30e-15,72;UBERON:0002530,2.74e-15,65;UBERON:0002100,9.38e-14,90;UBERON:0003914,1.18e-13,47;UBERON:0003929,1.95e-13,55;UBERON:0000490,7.21e-11,66;UBERON:0005911,2.61e-10,69;UBERON:0001041,2.90e-07,80;UBERON:0002369,5.09e-07,7;UBERON:0006858,5.09e-07,7|phase1_expression=0,0,0,0.60492842261366,1.00179145989269,0,0.233612640595526,0,0,0,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0.319984845586813,0,0,0.430761996159075,0.215471232685889,0.950117097281869,0.756090389279792,0,0,0.61506478758457,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0.202753862439029,0,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.898800331555214,0,0,0,0,0.856952953211411,0.441737081903227,0,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0.263772575460388,0.365950574409639,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,3.44169550792555,1.3599426674155,1.61910957491345,3.24888208723835,1.79210754838934,0.280888840263504,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,1.92974780784272,0.867426633830679,0.913396434936424,0.691846491768175,1.80867168663147,0.823120949949934,2.51333182659351,0,0.722996784599558,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0.239630249011841,0,0,0.449371918214468,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.405344047729279,0.877199924551994,0.439100230582101,0.268412837520744,0.420579897128254,0,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0.420814919341911,0.632365371242573,0.295220295959204,0.31399745568275,0.370191491765402,2.07516838961004,0.500535317148282,0.589676985339609,0.674586337154561,0.405720242777006,0.482354319504834,0.50925170356284,0,0.162135226775035,0.549122826376163,1.43768206527355,2.60498663367952,1.87222603868736,3.03094653536534,1.25578189465339,4.3419916922703,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0.44292937929755,0,0,0.172684981865896,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0,1.32745138339963,0,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.518459893167171,0,0.56369293868419,0.299033092087958,0,0.388902376688095,0.516639293910924,0,0.117357238645754,0.5208175393758,0.838874755405687,0.241584120826006,0.288030006257865,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0.920650473014354,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.37456602987953,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0,0.441596760403192,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0,0,0.355905054372522,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0|short_description=p2@Txnrd2}}
|EntrezGene=26462
|HGNC=
|MCL_coexpression_id=8
|UniProt=D3Z0K8,Q9JLT4
|association_with_transcript=-7bp_to_ENSMUST00000115605,ENSMUST00000115606,NM_013711,uc007ynx.1,uc007yny.1,uc012acg.1_5end
|description=CAGE_peak_2_at_Txnrd2_5end
|id=chr16:18426493..18426502,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,4.72e-16,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!1.09e-11!49;UBERON:0005173!1.09e-11!49;UBERON:0002417!1.09e-11!49;UBERON:0000916!1.09e-11!49;UBERON:0002107!8.01e-11!22;UBERON:0007499!8.01e-11!22;UBERON:0006925!8.01e-11!22;UBERON:0009497!8.01e-11!22;UBERON:0000015!8.01e-11!22;UBERON:0002423!8.01e-11!22;UBERON:0006235!8.01e-11!22;UBERON:0008835!8.01e-11!22;UBERON:0003894!8.01e-11!22;UBERON:0004161!8.01e-11!22;UBERON:0008836!8.01e-11!22;UBERON:0009854!6.67e-10!23;UBERON:0009856!6.67e-10!23;UBERON:0002365!3.23e-09!25;UBERON:0002330!3.23e-09!25;UBERON:0009569!4.26e-07!66;UBERON:0005256!4.71e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.95e-31,22;UBERON:0007499,3.95e-31,22;UBERON:0006925,3.95e-31,22;UBERON:0009497,3.95e-31,22;UBERON:0000015,3.95e-31,22;UBERON:0002423,3.95e-31,22;UBERON:0006235,3.95e-31,22;UBERON:0008835,3.95e-31,22;UBERON:0003894,3.95e-31,22;UBERON:0004161,3.95e-31,22;UBERON:0008836,3.95e-31,22;UBERON:0009854,1.05e-29,23;UBERON:0009856,1.05e-29,23;UBERON:0002365,3.39e-27,25;UBERON:0002330,3.39e-27,25;UBERON:0005172,6.05e-24,49;UBERON:0005173,6.05e-24,49;UBERON:0002417,6.05e-24,49;UBERON:0000916,6.05e-24,49;UBERON:0005256,4.96e-23,45;UBERON:0003104,8.33e-19,61;UBERON:0009142,8.33e-19,61;UBERON:0009569,3.26e-17,66;UBERON:0002368,9.62e-17,60;UBERON:0005177,5.41e-16,79;UBERON:0000949,1.30e-15,72;UBERON:0002530,2.74e-15,65;UBERON:0002100,9.38e-14,90;UBERON:0003914,1.18e-13,47;UBERON:0003929,1.95e-13,55;UBERON:0000490,7.21e-11,66;UBERON:0005911,2.61e-10,69;UBERON:0001041,2.90e-07,80;UBERON:0002369,5.09e-07,7;UBERON:0006858,5.09e-07,7
|phase1_expression=0,0,0,0.60492842261366,1.00179145989269,0,0.233612640595526,0,0,0,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0.319984845586813,0,0,0.430761996159075,0.215471232685889,0.950117097281869,0.756090389279792,0,0,0.61506478758457,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0.202753862439029,0,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.898800331555214,0,0,0,0,0.856952953211411,0.441737081903227,0,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0.263772575460388,0.365950574409639,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,3.44169550792555,1.3599426674155,1.61910957491345,3.24888208723835,1.79210754838934,0.280888840263504,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,1.92974780784272,0.867426633830679,0.913396434936424,0.691846491768175,1.80867168663147,0.823120949949934,2.51333182659351,0,0.722996784599558,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0.239630249011841,0,0,0.449371918214468,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.405344047729279,0.877199924551994,0.439100230582101,0.268412837520744,0.420579897128254,0,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0.420814919341911,0.632365371242573,0.295220295959204,0.31399745568275,0.370191491765402,2.07516838961004,0.500535317148282,0.589676985339609,0.674586337154561,0.405720242777006,0.482354319504834,0.50925170356284,0,0.162135226775035,0.549122826376163,1.43768206527355,2.60498663367952,1.87222603868736,3.03094653536534,1.25578189465339,4.3419916922703,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0.44292937929755,0,0,0.172684981865896,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0,1.32745138339963,0,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.518459893167171,0,0.56369293868419,0.299033092087958,0,0.388902376688095,0.516639293910924,0,0.117357238645754,0.5208175393758,0.838874755405687,0.241584120826006,0.288030006257865,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0.920650473014354,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.37456602987953,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0,0.441596760403192,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0,0,0.355905054372522,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0
|short_description=p2@Txnrd2
}}

Revision as of 12:06, 13 September 2013

Short description:p2@Txnrd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Txnrd2_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -7bp_to_ENSMUST00000115605, ENSMUST00000115606, NM_013711, uc007ynx.1, uc007yny.1, uc012acg.1_5end
EntrezGene:Txnrd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Txnrd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte4.72e-165

Uber anatomy
Ontology termp-valuen
liver3.95e-3122
epithelial sac3.95e-3122
digestive gland3.95e-3122
epithelium of foregut-midgut junction3.95e-3122
anatomical boundary3.95e-3122
hepatobiliary system3.95e-3122
foregut-midgut junction3.95e-3122
hepatic diverticulum3.95e-3122
liver primordium3.95e-3122
septum transversum3.95e-3122
liver bud3.95e-3122
digestive tract diverticulum1.05e-2923
sac1.05e-2923
exocrine gland3.39e-2725
exocrine system3.39e-2725
abdomen element6.05e-2449
abdominal segment element6.05e-2449
abdominal segment of trunk6.05e-2449
abdomen6.05e-2449
trunk mesenchyme4.96e-2345
mesenchyme8.33e-1961
entire embryonic mesenchyme8.33e-1961
subdivision of trunk3.26e-1766
endocrine gland9.62e-1760
trunk region element5.41e-1679
endocrine system1.30e-1572
gland2.74e-1565
trunk9.38e-1490
epithelial tube1.18e-1347
gut epithelium1.95e-1355
unilaminar epithelium7.21e-1166
endo-epithelium2.61e-1069
foregut2.90e-0780
adrenal gland5.09e-077
adrenal/interrenal gland5.09e-077







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:18426493..18426502,%2B&oldid=2933334"