FFCP PHASE1:Mm9::chr13:98015930..98015942,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:98015930..98015942,+|id=chr13:98015930..98015942,+|ontology_enrichment_celltype=CL:0000117!2.29e-38!23;CL:0000337!2.29e-38!23;CL:0000540!1.20e-25!33;CL:0000047!1.20e-25!33;CL:0000031!1.20e-25!33;CL:0000404!1.20e-25!33;CL:0002319!9.59e-24!43;CL:0000221!4.09e-23!44;CL:0000133!4.09e-23!44;CL:0000393!3.82e-21!39;CL:0000211!3.82e-21!39;CL:0000055!7.33e-20!50;CL:0002609!2.27e-19!6;CL:0002321!1.26e-14!70;CL:0000220!1.26e-14!70;CL:0000120!6.18e-11!3;CL:0002613!6.18e-11!3;CL:0002612!2.00e-10!3;CL:0002608!2.49e-10!3;CL:0000548!2.88e-07!115;CL:0000004!2.88e-07!115;CL:0000255!2.88e-07!115;CL:0000723!5.29e-07!91;CL:0000048!5.29e-07!91;CL:0002371!5.61e-07!118|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-52,23;CL:0000337,1.16e-52,23;CL:0000540,3.14e-36,33;CL:0000047,3.14e-36,33;CL:0000031,3.14e-36,33;CL:0000404,3.14e-36,33;CL:0000393,2.10e-30,39;CL:0000211,2.10e-30,39;CL:0002319,2.02e-27,43;CL:0000221,9.25e-27,44;CL:0000133,9.25e-27,44;CL:0002609,4.10e-23,6;CL:0000120,8.20e-18,3;CL:0002613,8.20e-18,3;CL:0002612,6.31e-17,3;CL:0002321,3.61e-16,70;CL:0000723,5.23e-12,91;CL:0000048,5.23e-12,91;CL:0000034,3.80e-11,97;CL:0002608,2.58e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.07e-21!34;UBERON:0001017!9.37e-21!73;UBERON:0005743!9.37e-21!73;UBERON:0000073!4.47e-20!75;UBERON:0001016!4.47e-20!75;UBERON:0002791!3.77e-16!29;UBERON:0003528!3.77e-16!29;UBERON:0001893!3.77e-16!29;UBERON:0001049!3.78e-16!52;UBERON:0005068!3.78e-16!52;UBERON:0006241!3.78e-16!52;UBERON:0007135!3.78e-16!52;UBERON:0002616!3.85e-15!49;UBERON:0004121!7.09e-15!102;UBERON:0000924!7.09e-15!102;UBERON:0006601!7.09e-15!102;UBERON:0000955!9.11e-15!50;UBERON:0006238!9.11e-15!50;UBERON:0000956!3.13e-13!21;UBERON:0001869!3.13e-13!21;UBERON:0000203!3.13e-13!21;UBERON:0002780!2.48e-11!39;UBERON:0001890!2.48e-11!39;UBERON:0006240!2.48e-11!39;UBERON:0000033!5.43e-11!63;UBERON:0003080!5.54e-11!40;UBERON:0001954!6.61e-11!7;UBERON:0003022!6.61e-11!7;UBERON:0002421!6.61e-11!7;UBERON:0000349!6.61e-11!7;UBERON:0002600!6.61e-11!7;UBERON:0002346!7.99e-11!71;UBERON:0003075!7.99e-11!71;UBERON:0007284!7.99e-11!71;UBERON:0002257!2.00e-10!3;UBERON:0003056!1.73e-08!49;UBERON:0002619!5.60e-08!17;UBERON:0007811!4.02e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.64e-22,34;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0002257,6.31e-17,3;UBERON:0000073,1.30e-15,54;UBERON:0003528,1.64e-14,29;UBERON:0002791,1.64e-14,29;UBERON:0001893,1.64e-14,29;UBERON:0001049,8.59e-14,52;UBERON:0005068,8.59e-14,52;UBERON:0006241,8.59e-14,52;UBERON:0007135,8.59e-14,52;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0000369,6.46e-11,5;UBERON:0002435,6.46e-11,5;UBERON:0000204,6.46e-11,5;UBERON:0010082,6.46e-11,5;UBERON:0002346,6.61e-11,64;UBERON:0003075,6.61e-11,64;UBERON:0007284,6.61e-11,64;UBERON:0002780,1.63e-10,39;UBERON:0001890,1.63e-10,39;UBERON:0006240,1.63e-10,39;UBERON:0001948,2.16e-10,5;UBERON:0002315,2.16e-10,5;UBERON:0003080,3.19e-10,40;UBERON:0010371,2.33e-09,73;UBERON:0000956,4.46e-09,21;UBERON:0001869,4.46e-09,21;UBERON:0000203,4.46e-09,21;UBERON:0002240,9.52e-09,6;UBERON:0005174,9.52e-09,6;UBERON:0001137,9.52e-09,6;UBERON:0002616,9.59e-09,46;UBERON:0000955,1.56e-08,47;UBERON:0006238,1.56e-08,47;UBERON:0003056,3.86e-08,49;UBERON:0010314,4.45e-07,92;UBERON:0002420,5.30e-07,8;UBERON:0007245,5.30e-07,8;UBERON:0010009,5.30e-07,8;UBERON:0010011,5.30e-07,8;UBERON:0000454,5.30e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,2.22548106945558,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,1.76272340924412,4.18518408828241,2.3135745748652,0,0,2.57230678351403,2.20444583341944,0.919218786610021,0,0.893811366596314,1.38245879930619,2.50583946687368,4.20843160571084,3.12548022334056,0,0,0,3.83017161115768,1.13897344639282,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:98015930..98015942,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:98015930..98015942,+ | |||
|id=chr13:98015930..98015942,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.29e-38!23;CL:0000337!2.29e-38!23;CL:0000540!1.20e-25!33;CL:0000047!1.20e-25!33;CL:0000031!1.20e-25!33;CL:0000404!1.20e-25!33;CL:0002319!9.59e-24!43;CL:0000221!4.09e-23!44;CL:0000133!4.09e-23!44;CL:0000393!3.82e-21!39;CL:0000211!3.82e-21!39;CL:0000055!7.33e-20!50;CL:0002609!2.27e-19!6;CL:0002321!1.26e-14!70;CL:0000220!1.26e-14!70;CL:0000120!6.18e-11!3;CL:0002613!6.18e-11!3;CL:0002612!2.00e-10!3;CL:0002608!2.49e-10!3;CL:0000548!2.88e-07!115;CL:0000004!2.88e-07!115;CL:0000255!2.88e-07!115;CL:0000723!5.29e-07!91;CL:0000048!5.29e-07!91;CL:0002371!5.61e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-52,23;CL:0000337,1.16e-52,23;CL:0000540,3.14e-36,33;CL:0000047,3.14e-36,33;CL:0000031,3.14e-36,33;CL:0000404,3.14e-36,33;CL:0000393,2.10e-30,39;CL:0000211,2.10e-30,39;CL:0002319,2.02e-27,43;CL:0000221,9.25e-27,44;CL:0000133,9.25e-27,44;CL:0002609,4.10e-23,6;CL:0000120,8.20e-18,3;CL:0002613,8.20e-18,3;CL:0002612,6.31e-17,3;CL:0002321,3.61e-16,70;CL:0000723,5.23e-12,91;CL:0000048,5.23e-12,91;CL:0000034,3.80e-11,97;CL:0002608,2.58e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.07e-21!34;UBERON:0001017!9.37e-21!73;UBERON:0005743!9.37e-21!73;UBERON:0000073!4.47e-20!75;UBERON:0001016!4.47e-20!75;UBERON:0002791!3.77e-16!29;UBERON:0003528!3.77e-16!29;UBERON:0001893!3.77e-16!29;UBERON:0001049!3.78e-16!52;UBERON:0005068!3.78e-16!52;UBERON:0006241!3.78e-16!52;UBERON:0007135!3.78e-16!52;UBERON:0002616!3.85e-15!49;UBERON:0004121!7.09e-15!102;UBERON:0000924!7.09e-15!102;UBERON:0006601!7.09e-15!102;UBERON:0000955!9.11e-15!50;UBERON:0006238!9.11e-15!50;UBERON:0000956!3.13e-13!21;UBERON:0001869!3.13e-13!21;UBERON:0000203!3.13e-13!21;UBERON:0002780!2.48e-11!39;UBERON:0001890!2.48e-11!39;UBERON:0006240!2.48e-11!39;UBERON:0000033!5.43e-11!63;UBERON:0003080!5.54e-11!40;UBERON:0001954!6.61e-11!7;UBERON:0003022!6.61e-11!7;UBERON:0002421!6.61e-11!7;UBERON:0000349!6.61e-11!7;UBERON:0002600!6.61e-11!7;UBERON:0002346!7.99e-11!71;UBERON:0003075!7.99e-11!71;UBERON:0007284!7.99e-11!71;UBERON:0002257!2.00e-10!3;UBERON:0003056!1.73e-08!49;UBERON:0002619!5.60e-08!17;UBERON:0007811!4.02e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.64e-22,34;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0002257,6.31e-17,3;UBERON:0000073,1.30e-15,54;UBERON:0003528,1.64e-14,29;UBERON:0002791,1.64e-14,29;UBERON:0001893,1.64e-14,29;UBERON:0001049,8.59e-14,52;UBERON:0005068,8.59e-14,52;UBERON:0006241,8.59e-14,52;UBERON:0007135,8.59e-14,52;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0000369,6.46e-11,5;UBERON:0002435,6.46e-11,5;UBERON:0000204,6.46e-11,5;UBERON:0010082,6.46e-11,5;UBERON:0002346,6.61e-11,64;UBERON:0003075,6.61e-11,64;UBERON:0007284,6.61e-11,64;UBERON:0002780,1.63e-10,39;UBERON:0001890,1.63e-10,39;UBERON:0006240,1.63e-10,39;UBERON:0001948,2.16e-10,5;UBERON:0002315,2.16e-10,5;UBERON:0003080,3.19e-10,40;UBERON:0010371,2.33e-09,73;UBERON:0000956,4.46e-09,21;UBERON:0001869,4.46e-09,21;UBERON:0000203,4.46e-09,21;UBERON:0002240,9.52e-09,6;UBERON:0005174,9.52e-09,6;UBERON:0001137,9.52e-09,6;UBERON:0002616,9.59e-09,46;UBERON:0000955,1.56e-08,47;UBERON:0006238,1.56e-08,47;UBERON:0003056,3.86e-08,49;UBERON:0010314,4.45e-07,92;UBERON:0002420,5.30e-07,8;UBERON:0007245,5.30e-07,8;UBERON:0010009,5.30e-07,8;UBERON:0010011,5.30e-07,8;UBERON:0000454,5.30e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,2.22548106945558,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,1.76272340924412,4.18518408828241,2.3135745748652,0,0,2.57230678351403,2.20444583341944,0.919218786610021,0,0.893811366596314,1.38245879930619,2.50583946687368,4.20843160571084,3.12548022334056,0,0,0,3.83017161115768,1.13897344639282,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:98015930..98015942,+ | |||
}} |
Revision as of 01:22, 13 September 2013
Short description: | p@chr13:98015930..98015942, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:98015930..98015942, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.16e-52 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-52 | 23 |
neuron | 3.14e-36 | 33 |
neuronal stem cell | 3.14e-36 | 33 |
neuroblast | 3.14e-36 | 33 |
electrically signaling cell | 3.14e-36 | 33 |
electrically responsive cell | 2.10e-30 | 39 |
electrically active cell | 2.10e-30 | 39 |
neural cell | 2.02e-27 | 43 |
ectodermal cell | 9.25e-27 | 44 |
neurectodermal cell | 9.25e-27 | 44 |
neuron of cerebral cortex | 4.10e-23 | 6 |
granule cell | 8.20e-18 | 3 |
striatum neuron | 8.20e-18 | 3 |
neuron of the ventral spinal cord | 6.31e-17 | 3 |
embryonic cell | 3.61e-16 | 70 |
somatic stem cell | 5.23e-12 | 91 |
multi fate stem cell | 5.23e-12 | 91 |
stem cell | 3.80e-11 | 97 |
hippocampal neuron | 2.58e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.