FFCP PHASE1:Mm9::chr11:11590836..11590851,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=40|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:11590836..11590851,+|id=chr11:11590836..11590851,+|ontology_enrichment_celltype=CL:0000838!7.68e-35!12;CL:0000084!1.25e-32!11;CL:0000827!1.25e-32!11;CL:0000542!5.81e-32!13;CL:0000051!5.81e-32!13;CL:0002031!2.22e-27!25;CL:0000791!3.22e-27!9;CL:0000789!3.22e-27!9;CL:0002420!3.22e-27!9;CL:0002419!3.22e-27!9;CL:0000790!3.22e-27!9;CL:0000624!2.28e-24!8;CL:0000738!7.87e-24!17;CL:0002087!7.87e-24!17;CL:0000988!1.32e-20!32;CL:0002032!1.32e-20!32;CL:0000037!1.32e-20!32;CL:0000566!1.32e-20!32;CL:0000837!1.32e-20!32;CL:0000893!1.21e-18!6;CL:0002489!1.21e-18!6;CL:0000898!1.21e-18!6;CL:0000809!1.21e-18!6;CL:0000810!1.21e-18!6;CL:0000895!1.21e-18!6;CL:0000808!1.21e-18!6;CL:0000894!1.21e-18!6;CL:0000806!1.21e-18!6;CL:0000807!1.21e-18!6;CL:0000805!1.21e-18!6;CL:0002425!1.21e-18!6;CL:0002436!1.21e-18!6;CL:0002427!1.21e-18!6;CL:0002428!1.21e-18!6;CL:0002429!1.21e-18!6;CL:0002433!1.21e-18!6;CL:0002431!1.21e-18!6;CL:0002432!1.21e-18!6;CL:0002320!3.02e-13!46;CL:0000134!3.02e-13!46;CL:0000219!9.25e-11!54;CL:0000063!3.59e-08!66;CL:0000553!1.67e-07!6;CL:0000556!1.67e-07!6|ontology_enrichment_celltype_v019_2=CL:0000084,6.78e-71,11;CL:0000827,6.78e-71,11;CL:0000791,7.69e-69,9;CL:0000789,7.69e-69,9;CL:0002420,7.69e-69,9;CL:0002419,7.69e-69,9;CL:0000790,7.69e-69,9;CL:0000838,5.33e-65,12;CL:0000542,5.21e-60,13;CL:0000051,5.21e-60,13;CL:0000624,1.63e-59,8;CL:0000738,6.54e-46,17;CL:0002087,6.54e-46,17;CL:0000893,6.02e-41,6;CL:0002489,6.02e-41,6;CL:0000898,6.02e-41,6;CL:0000809,6.02e-41,6;CL:0000810,6.02e-41,6;CL:0000895,6.02e-41,6;CL:0000808,6.02e-41,6;CL:0000894,6.02e-41,6;CL:0000806,6.02e-41,6;CL:0000807,6.02e-41,6;CL:0000805,6.02e-41,6;CL:0002425,6.02e-41,6;CL:0002436,6.02e-41,6;CL:0002427,6.02e-41,6;CL:0002428,6.02e-41,6;CL:0002429,6.02e-41,6;CL:0002433,6.02e-41,6;CL:0002431,6.02e-41,6;CL:0002432,6.02e-41,6;CL:0002031,3.19e-31,25;CL:0000988,2.23e-24,32;CL:0002032,2.23e-24,32;CL:0000037,2.23e-24,32;CL:0000837,2.23e-24,32;CL:0002320,6.46e-17,46;CL:0000134,6.46e-17,46;CL:0000219,2.22e-14,54;CL:0000815,2.90e-11,1;CL:0000792,2.90e-11,1;CL:0000625,5.74e-11,1;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.92e-33!23;UBERON:0000974!2.92e-33!23;UBERON:0004807!2.92e-33!23;UBERON:0005058!2.92e-33!23;UBERON:0003351!2.92e-33!23;UBERON:0009113!2.92e-33!23;UBERON:0003295!2.92e-33!23;UBERON:0009722!2.92e-33!23;UBERON:0005562!2.92e-33!23;UBERON:0007690!2.92e-33!23;UBERON:0004177!6.61e-32!29;UBERON:0006562!1.02e-31!24;UBERON:0003408!1.02e-31!24;UBERON:0001557!1.02e-31!24;UBERON:0001042!1.02e-31!24;UBERON:0008814!1.02e-31!24;UBERON:0009145!1.02e-31!24;UBERON:0002390!6.27e-29!45;UBERON:0003061!6.27e-29!45;UBERON:0000072!8.94e-28!27;UBERON:0002193!8.12e-27!48;UBERON:0000063!1.45e-20!35;UBERON:0002405!1.46e-18!70;UBERON:0005057!2.88e-18!51;UBERON:0000065!5.29e-17!41;UBERON:0001004!1.65e-16!42;UBERON:0003929!2.80e-13!55;UBERON:0002384!3.02e-13!46;UBERON:0003081!2.11e-12!88;UBERON:0002368!7.62e-12!60;UBERON:0002530!1.24e-10!65;UBERON:0000490!2.06e-10!66;UBERON:0005911!8.64e-10!69;UBERON:0000949!3.21e-09!72;UBERON:0001041!3.34e-08!92;UBERON:0000077!1.46e-07!97;UBERON:0000064!2.50e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.46e-17,46;UBERON:0002370,7.14e-11,23;UBERON:0000974,7.14e-11,23;UBERON:0004807,7.14e-11,23;UBERON:0005058,7.14e-11,23;UBERON:0003351,7.14e-11,23;UBERON:0009113,7.14e-11,23;UBERON:0003295,7.14e-11,23;UBERON:0009722,7.14e-11,23;UBERON:0005562,7.14e-11,23;UBERON:0007690,7.14e-11,23;UBERON:0006562,2.00e-10,24;UBERON:0003408,2.00e-10,24;UBERON:0001557,2.00e-10,24;UBERON:0001042,2.00e-10,24;UBERON:0008814,2.00e-10,24;UBERON:0009145,2.00e-10,24;UBERON:0000072,2.79e-09,27;UBERON:0004177,1.20e-08,29;UBERON:0005057,1.20e-08,29;UBERON:0000077,3.54e-07,35;UBERON:0007811,5.59e-07,36|phase1_expression=0,0,0,0,0,0,0,8.52213934714403,3.94208422024667,3.04283884218592,0.856089841127525,1.99430397488341,13.6960583944965,9.79108507092771,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0.42438965179803,0,1.09220046320974,0.783599367416806,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.389762468933385,0,0.596044064343795,0.841368146639782,0.147689527174577,0.201932899896295,0.228620419965,0.604957110821043,0.292373642219257,0.865906574762965,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:11590836..11590851,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:11590836..11590851,+ | |||
|id=chr11:11590836..11590851,+ | |||
|ontology_enrichment_celltype=CL:0000838!7.68e-35!12;CL:0000084!1.25e-32!11;CL:0000827!1.25e-32!11;CL:0000542!5.81e-32!13;CL:0000051!5.81e-32!13;CL:0002031!2.22e-27!25;CL:0000791!3.22e-27!9;CL:0000789!3.22e-27!9;CL:0002420!3.22e-27!9;CL:0002419!3.22e-27!9;CL:0000790!3.22e-27!9;CL:0000624!2.28e-24!8;CL:0000738!7.87e-24!17;CL:0002087!7.87e-24!17;CL:0000988!1.32e-20!32;CL:0002032!1.32e-20!32;CL:0000037!1.32e-20!32;CL:0000566!1.32e-20!32;CL:0000837!1.32e-20!32;CL:0000893!1.21e-18!6;CL:0002489!1.21e-18!6;CL:0000898!1.21e-18!6;CL:0000809!1.21e-18!6;CL:0000810!1.21e-18!6;CL:0000895!1.21e-18!6;CL:0000808!1.21e-18!6;CL:0000894!1.21e-18!6;CL:0000806!1.21e-18!6;CL:0000807!1.21e-18!6;CL:0000805!1.21e-18!6;CL:0002425!1.21e-18!6;CL:0002436!1.21e-18!6;CL:0002427!1.21e-18!6;CL:0002428!1.21e-18!6;CL:0002429!1.21e-18!6;CL:0002433!1.21e-18!6;CL:0002431!1.21e-18!6;CL:0002432!1.21e-18!6;CL:0002320!3.02e-13!46;CL:0000134!3.02e-13!46;CL:0000219!9.25e-11!54;CL:0000063!3.59e-08!66;CL:0000553!1.67e-07!6;CL:0000556!1.67e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.78e-71,11;CL:0000827,6.78e-71,11;CL:0000791,7.69e-69,9;CL:0000789,7.69e-69,9;CL:0002420,7.69e-69,9;CL:0002419,7.69e-69,9;CL:0000790,7.69e-69,9;CL:0000838,5.33e-65,12;CL:0000542,5.21e-60,13;CL:0000051,5.21e-60,13;CL:0000624,1.63e-59,8;CL:0000738,6.54e-46,17;CL:0002087,6.54e-46,17;CL:0000893,6.02e-41,6;CL:0002489,6.02e-41,6;CL:0000898,6.02e-41,6;CL:0000809,6.02e-41,6;CL:0000810,6.02e-41,6;CL:0000895,6.02e-41,6;CL:0000808,6.02e-41,6;CL:0000894,6.02e-41,6;CL:0000806,6.02e-41,6;CL:0000807,6.02e-41,6;CL:0000805,6.02e-41,6;CL:0002425,6.02e-41,6;CL:0002436,6.02e-41,6;CL:0002427,6.02e-41,6;CL:0002428,6.02e-41,6;CL:0002429,6.02e-41,6;CL:0002433,6.02e-41,6;CL:0002431,6.02e-41,6;CL:0002432,6.02e-41,6;CL:0002031,3.19e-31,25;CL:0000988,2.23e-24,32;CL:0002032,2.23e-24,32;CL:0000037,2.23e-24,32;CL:0000837,2.23e-24,32;CL:0002320,6.46e-17,46;CL:0000134,6.46e-17,46;CL:0000219,2.22e-14,54;CL:0000815,2.90e-11,1;CL:0000792,2.90e-11,1;CL:0000625,5.74e-11,1;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.92e-33!23;UBERON:0000974!2.92e-33!23;UBERON:0004807!2.92e-33!23;UBERON:0005058!2.92e-33!23;UBERON:0003351!2.92e-33!23;UBERON:0009113!2.92e-33!23;UBERON:0003295!2.92e-33!23;UBERON:0009722!2.92e-33!23;UBERON:0005562!2.92e-33!23;UBERON:0007690!2.92e-33!23;UBERON:0004177!6.61e-32!29;UBERON:0006562!1.02e-31!24;UBERON:0003408!1.02e-31!24;UBERON:0001557!1.02e-31!24;UBERON:0001042!1.02e-31!24;UBERON:0008814!1.02e-31!24;UBERON:0009145!1.02e-31!24;UBERON:0002390!6.27e-29!45;UBERON:0003061!6.27e-29!45;UBERON:0000072!8.94e-28!27;UBERON:0002193!8.12e-27!48;UBERON:0000063!1.45e-20!35;UBERON:0002405!1.46e-18!70;UBERON:0005057!2.88e-18!51;UBERON:0000065!5.29e-17!41;UBERON:0001004!1.65e-16!42;UBERON:0003929!2.80e-13!55;UBERON:0002384!3.02e-13!46;UBERON:0003081!2.11e-12!88;UBERON:0002368!7.62e-12!60;UBERON:0002530!1.24e-10!65;UBERON:0000490!2.06e-10!66;UBERON:0005911!8.64e-10!69;UBERON:0000949!3.21e-09!72;UBERON:0001041!3.34e-08!92;UBERON:0000077!1.46e-07!97;UBERON:0000064!2.50e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.46e-17,46;UBERON:0002370,7.14e-11,23;UBERON:0000974,7.14e-11,23;UBERON:0004807,7.14e-11,23;UBERON:0005058,7.14e-11,23;UBERON:0003351,7.14e-11,23;UBERON:0009113,7.14e-11,23;UBERON:0003295,7.14e-11,23;UBERON:0009722,7.14e-11,23;UBERON:0005562,7.14e-11,23;UBERON:0007690,7.14e-11,23;UBERON:0006562,2.00e-10,24;UBERON:0003408,2.00e-10,24;UBERON:0001557,2.00e-10,24;UBERON:0001042,2.00e-10,24;UBERON:0008814,2.00e-10,24;UBERON:0009145,2.00e-10,24;UBERON:0000072,2.79e-09,27;UBERON:0004177,1.20e-08,29;UBERON:0005057,1.20e-08,29;UBERON:0000077,3.54e-07,35;UBERON:0007811,5.59e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,8.52213934714403,3.94208422024667,3.04283884218592,0.856089841127525,1.99430397488341,13.6960583944965,9.79108507092771,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0.42438965179803,0,1.09220046320974,0.783599367416806,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.389762468933385,0,0.596044064343795,0.841368146639782,0.147689527174577,0.201932899896295,0.228620419965,0.604957110821043,0.292373642219257,0.865906574762965,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:11590836..11590851,+ | |||
}} |
Revision as of 18:49, 12 September 2013
Short description: | p@chr11:11590836..11590851, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:11590836..11590851, + |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.46e-17 | 46 |
thymus | 7.14e-11 | 23 |
neck | 7.14e-11 | 23 |
respiratory system epithelium | 7.14e-11 | 23 |
hemolymphoid system gland | 7.14e-11 | 23 |
pharyngeal epithelium | 7.14e-11 | 23 |
thymic region | 7.14e-11 | 23 |
pharyngeal gland | 7.14e-11 | 23 |
entire pharyngeal arch endoderm | 7.14e-11 | 23 |
thymus primordium | 7.14e-11 | 23 |
early pharyngeal endoderm | 7.14e-11 | 23 |
pharynx | 2.00e-10 | 24 |
gland of gut | 2.00e-10 | 24 |
upper respiratory tract | 2.00e-10 | 24 |
chordate pharynx | 2.00e-10 | 24 |
pharyngeal arch system | 2.00e-10 | 24 |
pharyngeal region of foregut | 2.00e-10 | 24 |
segment of respiratory tract | 2.79e-09 | 27 |
hemopoietic organ | 1.20e-08 | 29 |
immune organ | 1.20e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.54e-07 | 35 |
craniocervical region | 5.59e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.