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FFCP PHASE1:Mm9::chr9:70055149..70055163,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=71602|HGNC=|MCL_coexpression_id=12|UniProt=E9Q634,Q8C123,Q80X36|association_with_transcript=0bp_to_ENSMUST00000034745,NM_181072,uc009qnv.1,uc009qnw.1,uc009qnx.1,uc012gwk.1_5end|description=CAGE_peak_1_at_Myo1e_5end|id=chr9:70055149..70055163,+|ontology_enrichment_celltype=CL:0000066!1.31e-08!25;CL:0000223!9.36e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,1.31e-08,25;CL:0000223,9.35e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.41e-12!59;UBERON:0004119!1.14e-11!130;UBERON:0000925!1.14e-11!130;UBERON:0006595!1.14e-11!130;UBERON:0001007!4.84e-11!128;UBERON:0001555!4.84e-11!128;UBERON:0007026!4.84e-11!128;UBERON:0000160!5.73e-11!43;UBERON:0004921!3.69e-10!126;UBERON:0004185!3.69e-10!126;UBERON:0004923!1.28e-08!24;UBERON:0000344!1.98e-08!15;UBERON:0001242!2.88e-07!13;UBERON:0000060!2.88e-07!13;UBERON:0001262!2.88e-07!13;UBERON:0004786!2.88e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.75e-12,47;UBERON:0000160,1.27e-10,31;UBERON:0004119,3.26e-10,118;UBERON:0000925,3.26e-10,118;UBERON:0006595,3.26e-10,118;UBERON:0001007,1.27e-09,116;UBERON:0001555,1.27e-09,116;UBERON:0007026,1.27e-09,116;UBERON:0004921,8.54e-09,114;UBERON:0004923,1.28e-08,24;UBERON:0000344,1.97e-08,15;UBERON:0001242,2.88e-07,13;UBERON:0001262,2.88e-07,13;UBERON:0004786,2.88e-07,13|phase1_expression=16.6554800988986,180.769261157189,170.624714771076,136.108895088074,122.218558106909,77.8959821671169,72.1863059440174,19.2393751927949,1.12630977721333,0.234064526321993,0.513653904676515,0.239316476986009,0.171200729931206,0.34968160967599,12.9912807108108,22.6772299476605,4.89693314689703,131.389991871706,131.081398527086,123.072999021429,14.7975324862861,50.9362579660542,47.7995614124252,64.3169539629495,65.3816451041435,116.569088715349,112.859642993678,103.426191689227,57.0070258369122,45.1133932270276,40.5766834499208,0,0,0,26.285497397366,15.2935873729813,24.908661464009,0,0.7813353445238,0,0.588231488031014,0,0,21.150665419897,20.88364783122,14.8672869250962,16.4302182313088,23.9827672018491,27.6804590245434,25.2758868796568,16.7983705950435,8.62515386189829,160.400171391196,7.97898356212479,1.68046899571232,3.08711323243136,8.88253663810146,6.18806510732931,3.03474691289397,2.64495489636016,0.633831403506179,13.8926258148344,12.450127145556,23.3973926493164,28.6771245144423,28.419204597844,18.2756067416227,24.5899715405795,1.65903379693564,2.29510095163874,2.52389953621658,3.71346279724945,3.97563373712904,2.20483438586917,2.30029130443767,2.75765635983006,5.50579404996943,3.70293280447044,6.14426133024974,3.56092976871523,2.47016637726506,1.56274011167028,7.2587579740359,5.06486349028512,4.27835093775068,4.41942878210502,3.84403538157578,3.72798891650601,49.1462994732365,59.0969600035063,48.9870985905835,22.371020801516,34.6785380190953,49.1129904390414,31.8390444549358,45.6987424839282,19.1004411379183,19.2586264513205,14.0284442485549,12.0135455333516,27.7461536960061,29.5150898052931,20.3844191765317,14.2213340630666,18.6182295269644,14.9482320630308,16.1767822404731,35.1686349534705,95.5480790658064,12.1722554033156,4.16364784238726,7.30717147949139,12.9144678463393,9.04335843315735,8.34879820663504,8.79666139307728,47.9558237404685,12.7247434089522,26.5383165584962,30.5739346400603,23.1883594383413,37.8202697445473,74.5567044872489,7.31951992528868,7.54008144528438,52.3686963177612,4.67278985573089,2.39961092397363,1.65191295194984,7.33974133083631,7.32000964509802,2.38743269014442,4.69325664519146,10.2286182932132,12.259494629014,10.3834408363365,9.67473956578005,37.3220911830279,17.4378703319236,13.4682787767343,4.42409506073193,5.28774840196988,4.68161537493908,9.34369870581433,8.70867189136997,7.43059577652129,7.30873451565885,9.8307280880826,10.1316956678436,12.8592134514117,15.8356011747554,15.5628970023578,13.9023624612799,25.4224081561182,23.0475992776897,6.36909653819178,1.40442637462647,0,0.284163499395593,8.90640821902658,5.62862543954631,5.94204802821349,7.81257627431194,10.231740050865,8.17615698303105,6.97601834251224,11.267482858784,10.5088808130453,10.0381508447223,16.7450813360677,13.7006288132496,15.0585987048092,16.2467085315377,14.4942932261202,9.67333763394985,4.42489833230923,128.863325363681,43.8987940661483,7.67837701926842,8.59275685883622,11.2114691350221,14.9245808221273,17.5678654637448,18.8323369851434,42.707615539006,29.810510805046,42.7269854960458,37.2048602716952,52.2503753479242,49.4350674759822,52.9538222193001,55.5604152379684,7.39704813717019,12.6815848996799,14.6520056375005,13.8482902934814,14.5464365375719,19.0068071902763,30.8594301166376,30.1124701878388,32.1847392074818,29.3685250133885,41.2069151651137,2.16898637430922,3.93117990226406,3.82265591054251,5.07150303471257,7.47649195232492,8.65727896056827,11.2201493605816,18.321280625579,22.2394744682346,37.3797336971122,33.4926852901653,36.196370081289,37.6342528141196,33.7267137421195,47.7619086149734,33.8098338004887,6.63219941196697,18.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|EntrezGene=71602
|HGNC=
|MCL_coexpression_id=12
|UniProt=E9Q634,Q8C123,Q80X36
|association_with_transcript=0bp_to_ENSMUST00000034745,NM_181072,uc009qnv.1,uc009qnw.1,uc009qnx.1,uc012gwk.1_5end
|description=CAGE_peak_1_at_Myo1e_5end
|id=chr9:70055149..70055163,+
|ontology_enrichment_celltype=CL:0000066!1.31e-08!25;CL:0000223!9.36e-07!20
|ontology_enrichment_celltype_v019_2=CL:0000066,1.31e-08,25;CL:0000223,9.35e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.41e-12!59;UBERON:0004119!1.14e-11!130;UBERON:0000925!1.14e-11!130;UBERON:0006595!1.14e-11!130;UBERON:0001007!4.84e-11!128;UBERON:0001555!4.84e-11!128;UBERON:0007026!4.84e-11!128;UBERON:0000160!5.73e-11!43;UBERON:0004921!3.69e-10!126;UBERON:0004185!3.69e-10!126;UBERON:0004923!1.28e-08!24;UBERON:0000344!1.98e-08!15;UBERON:0001242!2.88e-07!13;UBERON:0000060!2.88e-07!13;UBERON:0001262!2.88e-07!13;UBERON:0004786!2.88e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.75e-12,47;UBERON:0000160,1.27e-10,31;UBERON:0004119,3.26e-10,118;UBERON:0000925,3.26e-10,118;UBERON:0006595,3.26e-10,118;UBERON:0001007,1.27e-09,116;UBERON:0001555,1.27e-09,116;UBERON:0007026,1.27e-09,116;UBERON:0004921,8.54e-09,114;UBERON:0004923,1.28e-08,24;UBERON:0000344,1.97e-08,15;UBERON:0001242,2.88e-07,13;UBERON:0001262,2.88e-07,13;UBERON:0004786,2.88e-07,13
|phase1_expression=16.6554800988986,180.769261157189,170.624714771076,136.108895088074,122.218558106909,77.8959821671169,72.1863059440174,19.2393751927949,1.12630977721333,0.234064526321993,0.513653904676515,0.239316476986009,0.171200729931206,0.34968160967599,12.9912807108108,22.6772299476605,4.89693314689703,131.389991871706,131.081398527086,123.072999021429,14.7975324862861,50.9362579660542,47.7995614124252,64.3169539629495,65.3816451041435,116.569088715349,112.859642993678,103.426191689227,57.0070258369122,45.1133932270276,40.5766834499208,0,0,0,26.285497397366,15.2935873729813,24.908661464009,0,0.7813353445238,0,0.588231488031014,0,0,21.150665419897,20.88364783122,14.8672869250962,16.4302182313088,23.9827672018491,27.6804590245434,25.2758868796568,16.7983705950435,8.62515386189829,160.400171391196,7.97898356212479,1.68046899571232,3.08711323243136,8.88253663810146,6.18806510732931,3.03474691289397,2.64495489636016,0.633831403506179,13.8926258148344,12.450127145556,23.3973926493164,28.6771245144423,28.419204597844,18.2756067416227,24.5899715405795,1.65903379693564,2.29510095163874,2.52389953621658,3.71346279724945,3.97563373712904,2.20483438586917,2.30029130443767,2.75765635983006,5.50579404996943,3.70293280447044,6.14426133024974,3.56092976871523,2.47016637726506,1.56274011167028,7.2587579740359,5.06486349028512,4.27835093775068,4.41942878210502,3.84403538157578,3.72798891650601,49.1462994732365,59.0969600035063,48.9870985905835,22.371020801516,34.6785380190953,49.1129904390414,31.8390444549358,45.6987424839282,19.1004411379183,19.2586264513205,14.0284442485549,12.0135455333516,27.7461536960061,29.5150898052931,20.3844191765317,14.2213340630666,18.6182295269644,14.9482320630308,16.1767822404731,35.1686349534705,95.5480790658064,12.1722554033156,4.16364784238726,7.30717147949139,12.9144678463393,9.04335843315735,8.34879820663504,8.79666139307728,47.9558237404685,12.7247434089522,26.5383165584962,30.5739346400603,23.1883594383413,37.8202697445473,74.5567044872489,7.31951992528868,7.54008144528438,52.3686963177612,4.67278985573089,2.39961092397363,1.65191295194984,7.33974133083631,7.32000964509802,2.38743269014442,4.69325664519146,10.2286182932132,12.259494629014,10.3834408363365,9.67473956578005,37.3220911830279,17.4378703319236,13.4682787767343,4.42409506073193,5.28774840196988,4.68161537493908,9.34369870581433,8.70867189136997,7.43059577652129,7.30873451565885,9.8307280880826,10.1316956678436,12.8592134514117,15.8356011747554,15.5628970023578,13.9023624612799,25.4224081561182,23.0475992776897,6.36909653819178,1.40442637462647,0,0.284163499395593,8.90640821902658,5.62862543954631,5.94204802821349,7.81257627431194,10.231740050865,8.17615698303105,6.97601834251224,11.267482858784,10.5088808130453,10.0381508447223,16.7450813360677,13.7006288132496,15.0585987048092,16.2467085315377,14.4942932261202,9.67333763394985,4.42489833230923,128.863325363681,43.8987940661483,7.67837701926842,8.59275685883622,11.2114691350221,14.9245808221273,17.5678654637448,18.8323369851434,42.707615539006,29.810510805046,42.7269854960458,37.2048602716952,52.2503753479242,49.4350674759822,52.9538222193001,55.5604152379684,7.39704813717019,12.6815848996799,14.6520056375005,13.8482902934814,14.5464365375719,19.0068071902763,30.8594301166376,30.1124701878388,32.1847392074818,29.3685250133885,41.2069151651137,2.16898637430922,3.93117990226406,3.82265591054251,5.07150303471257,7.47649195232492,8.65727896056827,11.2201493605816,18.321280625579,22.2394744682346,37.3797336971122,33.4926852901653,36.196370081289,37.6342528141196,33.7267137421195,47.7619086149734,33.8098338004887,6.63219941196697,18.903937267275,18.8417045210459,31.2138030223708,47.5717771134757,69.032655856944,51.5152830344589,55.329935581273,48.0578376537842,51.9822545823408,39.9826487906401,47.4883700131213,40.7910345199863,58.8086007363162,53.3027570142335,23.6046851049137,23.1786866895975,14.9312048688647,16.0580010631318,6.88526770582037,20.1976741763498,2.83957397474631,1.95219372148319,2.15423397732799,3.34556317133573,3.7875774594007,5.09537755419898,4.04810701674894,3.21481443702443,5.13874111330481,8.9969968598106,32.3623394274852,8.01295216502649,10.4247653986289,22.6009068472374,19.9117707509944,14.0812768969889,15.1161778482376,20.1807435338811,16.832207894204,19.3684143204674,24.8091161441492,18.1766864738753,21.0333453246986,21.4904995396355,17.9211634577498,21.6584640821192,17.3624198934432,5.94201610303324,9.05510786479281,14.5749183821483,12.4138163549592,13.3776613201553,15.3030589159972,14.0053876592716,26.5179030111993,43.637406597947,13.4522322813527,49.6307621353855,29.5479900853507,23.7029794967653,34.140490384897,41.8559294349906,55.0898781230418,17.0591277849669,24.9471485964865,10.5257302661243,4.44466865687308,14.1276342753518,36.7707472569558,41.6376275235871,9.85874893964361,6.43776680688827,6.63359874261234,24.821436068393,8.06656783631895,20.9419051140654,19.3329560071024,24.6724189297073,20.9628061196331,24.0058536564981,30.1685113397476,33.5047605739558,64.0297968061457,24.853572523477,0,4.33597983527538,3.30916980914195,6.61134040369762,4.00395452780966,5.06868376472335,3.99014611395563,4.81756223922615,1.25831213310853,1.20792060413003,3.45636007509439,3.47612232690996,9.52808511863772,8.42229848751584,4.54722880422283,5.90788095702689,4.76835251475036,4.68762253127878,4.13530676088816,5.04832249740738,3.27689268616499,4.03304740547362,4.58052039476836,3.84847366561318,3.62318396762864,27.887837184671,20.8666796171621,4.12683740403588,17.7957693345923,17.5802530569293,19.8943423978253,24.7254692760808,42.8736758158132,19.0597399533438,3.95326289831947,2.30162618253588,4.01026859407578,5.15559547031063,3.42541259885321,6.0431511791176,4.05013500139084,4.95353323546643,2.26571204492102,4.65984280576638,5.70830411712972,7.18244772121856,7.0000778359195,12.6415492875513,6.49800804146745,11.5821410323509,14.6682840349066,16.6888396363504,10.2694147069381,13.6456494352451,13.9413614939632,13.9583492625696,15.2635657175908,14.6617599007151,16.3691086523498,15.2413981210584,15.9920369803901,11.3816440073586,18.1317796353455,14.8670909335741,10.2860775715625,16.5052499728184,13.8292990169446,16.5694914960855,17.4102353768362,17.515223833577,18.2927972872773,17.8887403777733,13.8520196122779,19.0788372363631,19.8120480267371,15.8592216624657,15.1415485972785,17.1979893716422,14.0821826016233,11.9909077410214,16.1412809827332,16.545071161719,18.363679878609,17.6473135295612,20.8681052058379
|short_description=p1@Myo1e
}}

Revision as of 18:38, 14 September 2013

Short description:p1@Myo1e
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Myo1e_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000034745, NM_181072, uc009qnv.1, uc009qnw.1, uc009qnx.1, uc012gwk.1_5end
EntrezGene:Myo1e
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Myo1e

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5180.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6170.62
CD326+ enterocyte, pool1.CNhs13542.11848-124I3136.11
CD326+ enterocyte, pool2.CNhs13197.11849-124I4122.22
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I777.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I872.19
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A322.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2131.39
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4131.08
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6123.07
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H250.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I947.80
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D164.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D265.38
GP2+ M cell, pool1.CNhs13228.11845-124H9116.57
GP2+ M cell, pool2.CNhs13231.11846-124I1112.86
GP2+ M cell, pool3.CNhs13240.11847-124I2103.43
Ileum epithelium, pool1.CNhs13199.10252-104B957.01
Ileum epithelium, pool2.CNhs13232.10253-104C145.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C840.58
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F724.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D821.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.68
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2160.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.89
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C723.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E728.68
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D228.42
Mouse Microglia, donor1.CNhs12629.11718-123C818.28
Mouse Microglia, donor2.CNhs12634.11736-123E824.59
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D949.15
Mouse Schwann, donor2.CNhs12573.11746-123F959.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G348.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C434.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C849.11
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F645.70
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.17
accessory axillary lymph node, adult.CNhs10475.1063-29H995.55
adrenal gland, adult.CNhs10508.49-24D712.17
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I112.91
adrenal gland, embryo E18.CNhs11026.1262-18F59.04
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I38.80
amnion, adult pregnant day17.5.CNhs10488.583-22A847.96
aorta, adult.CNhs10498.46-23H112.72
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F530.57
bone (os femoris), neonate N16.CNhs11225.1525-43A623.19
bone (os femoris), neonate N20.CNhs11195.1350-25C337.82
cecum, adult.CNhs10467.37-13H474.56
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H752.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A47.34
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F210.23
diencephalon, adult.CNhs10482.20-12F212.26
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A237.32
epididymis, adult.CNhs10490.58-23B217.44
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D49.34
eyeball, neonate N00.CNhs11207.633-15C68.71
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H212.86
forelimb, embryo E13.CNhs10589.384-1E215.84
forelimb, embryo E14.CNhs10577.413-26A815.56
forelimb, embryo E15.CNhs11007.437-20E713.90
forelimb, embryo E17.CNhs10598.1517-43C425.42
forelimb, embryo E18.CNhs11008.1520-43B523.05
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E98.91
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C810.23
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E310.51
heart, neonate N03.CNhs11221.1349-25I210.04
heart, neonate N10.CNhs11118.749-24G116.75
heart, neonate N16.CNhs11209.782-15G113.70
heart, neonate N20.CNhs11127.821-26I615.06
heart, neonate N25.CNhs11196.1351-25D316.25
heart, neonate N30.CNhs11202.1390-42D214.49
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I3128.86
intestine, adult.CNhs10496.178-9A343.90
intestine, embryo E12.CNhs11019.1251-16I57.68
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D811.21
intestine, embryo E16.CNhs10585.463-22H414.92
intestine, embryo E17.CNhs10582.482-18D317.57
intestine, embryo E18.CNhs10526.1289-20F718.83
intestine, neonate N00.CNhs11126.644-26D142.71
intestine, neonate N01.CNhs11192.1322-23E929.81
intestine, neonate N06.CNhs11102.688-20B842.73
intestine, neonate N07.CNhs11095.720-20F237.20
intestine, neonate N10.CNhs11098.755-23A552.25
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E352.95
intestine, neonate N30.CNhs11131.1384-42G155.56
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F812.68
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I213.85
kidney, embryo E18.CNhs11001.1288-20C714.55
kidney, neonate N00.CNhs11214.646-21G719.01
kidney, neonate N10.CNhs11206.758-6D530.86
kidney, neonate N20.CNhs11113.832-19I130.11
kidney, neonate N25.CNhs11122.1353-25F332.18
kidney, neonate N30.CNhs11203.1385-42H129.37
liver, adult pregnant day01.CNhs10466.508-5B241.21
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G411.22
liver, neonate N00.CNhs11117.641-24F418.32
liver, neonate N03.CNhs11123.1345-25G222.24
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H233.49
liver, neonate N10.CNhs11115.751-24B936.20
liver, neonate N20.CNhs11220.823-25A337.63
liver, neonate N25.CNhs11198.1368-26H133.73
liver, neonate N30.CNhs11106.1382-42D147.76
lung, adult.CNhs10474.28-22B133.81
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F818.90
lung, embryo E15.CNhs11020.432-17C518.84
lung, embryo E16.CNhs10998.458-17B631.21
lung, embryo E17.CNhs10605.480-44A647.57
lung, embryo E18.CNhs10583.1287-20I669.03
lung, neonate N00.CNhs11224.640-42C651.52
lung, neonate N06.CNhs11212.683-20E555.33
lung, neonate N07.CNhs11111.715-19A348.06
lung, neonate N10.CNhs11219.750-23E651.98
lung, neonate N20.CNhs11109.822-18A439.98
lung, neonate N25.CNhs11119.1359-25C747.49
lung, neonate N30.CNhs11133.1394-42H240.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A158.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A153.30
mammary gland, adult lactating day02.CNhs10480.595-22B623.60
mammary gland, adult pregnant day19.CNhs10476.588-5H223.18
medulla oblongata, adult.CNhs10477.17-12C214.93
medulla oblongata, neonate N30.CNhs11200.1396-42A316.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.20
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I732.36
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I410.42
oviduct, adult pregnant day01.CNhs10500.988-6G622.60
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F414.08
pancreas, embryo E15.CNhs11042.1556-45F215.12
pancreas, embryo E16.CNhs11003.460-26E520.18
pancreas, embryo E17.CNhs10599.1558-45G316.83
pancreas, embryo E18.CNhs10580.1535-43I719.37
pancreas, neonate N00.CNhs11105.645-26G924.81
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D821.03
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G817.36
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C79.06
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B912.41
pituitary gland, embryo E16.CNhs11036.449-43F613.38
pituitary gland, embryo E17.CNhs11039.1265-44F515.30
pituitary gland, neonate N00.CNhs11190.1308-22E914.01
placenta, adult pregnant day10.CNhs10472.539-13I726.52
placenta, adult pregnant day17.CNhs10464.577-18G343.64
prostate, adult.CNhs10470.859-1F813.45
skin, adult.CNhs10492.30-1C349.63
skin, neonate N00.CNhs11124.650-25G429.55
skin, neonate N03.CNhs11215.662-22H323.70
skin, neonate N06.CNhs11097.693-20I534.14
skin, neonate N10.CNhs11108.762-6C441.86
small intestine, neonate N16.CNhs11114.790-21I155.09
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G224.95
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D114.13
spleen, neonate N20.CNhs11112.824-19H136.77
spleen, neonate N25.CNhs11099.1354-25G341.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.63
stomach, adult.CNhs10503.33-1H624.82
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G820.94
stomach, embryo E16.CNhs11022.459-17D419.33
stomach, embryo E17.CNhs11006.1035-18D524.67
stomach, embryo E18.CNhs10999.1286-20C620.96
stomach, neonate N03.CNhs11193.1340-24B824.01
stomach, neonate N07.CNhs11210.718-18A930.17
stomach, neonate N25.CNhs11104.1355-25E433.50
stomach, neonate N30.CNhs11134.1386-42I164.03
submandibular gland, adult.CNhs10469.59-29C124.85
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I44.82
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I28.42
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A24.58
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B427.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.13
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.80
urinary bladder, adult.CNhs10481.879-12E417.58
uterus, adult pregnant day19.CNhs10497.590-15F519.89
uterus, adult.CNhs10509.92-27E524.73
vagina, adult.CNhs10502.89-27D542.87
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D212.64
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F211.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.65
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.20
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C216.55
whole body, neonate N01.CNhs10576.659-23C618.36
whole body, neonate N06.CNhs10515.692-21D117.65
whole body, neonate N10.CNhs10518.761-6B420.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.31e-0825
endodermal cell9.35e-0720

Uber anatomy
Ontology termp-valuen
gastrointestinal system7.75e-1247
intestine1.27e-1031
endoderm-derived structure3.26e-10118
endoderm3.26e-10118
presumptive endoderm3.26e-10118
digestive system1.27e-09116
digestive tract1.27e-09116
primitive gut1.27e-09116
subdivision of digestive tract8.54e-09114
organ component layer1.28e-0824
mucosa1.97e-0815
intestinal mucosa2.88e-0713
wall of intestine2.88e-0713
gastrointestinal system mucosa2.88e-0713







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