FFCP PHASE1:Mm9::chr4:127008043..127008089,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14620|HGNC=|UniProt=P28231,A2A8M5|association_with_transcript=0bp_to_ENSMUST00000046532,NM_001160012,uc008uut.2_5end|description=CAGE_peak_2_at_Gjb3_5end|id=chr4:127008043..127008089,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002076,8.17e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.88e-09!15;UBERON:0001242!2.51e-07!13;UBERON:0000060!2.51e-07!13;UBERON:0001262!2.51e-07!13;UBERON:0004786!2.51e-07!13;UBERON:0005409!2.53e-07!59;UBERON:0000160!4.03e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.57e-15,47;UBERON:0000160,4.08e-15,31;UBERON:0000344,2.31e-10,15;UBERON:0001242,2.83e-08,13;UBERON:0001262,2.83e-08,13;UBERON:0004786,2.83e-08,13;UBERON:0000014,8.03e-07,5;UBERON:0001003,8.03e-07,5;UBERON:0002097,8.03e-07,5;UBERON:0002199,8.03e-07,5;UBERON:0007029,8.03e-07,5;UBERON:0007376,8.03e-07,5;UBERON:0002416,8.03e-07,5;UBERON:0007383,8.03e-07,5|phase1_expression=0.160148847104794,6.2815573375085,3.63999391511629,0.60492842261366,1.50268718983904,9.56911849897772,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,120.154309517848,145.445484196586,4.59385571292016,13.7843838770904,9.04979177280734,29.6436534351943,22.6827116783938,24.3903561720835,0,0,0,10.1098066912946,10.3065480122265,11.0251452381679,1.67412652294763,0.7813353445238,1.57057123192139,1.17646297606203,2.04913645487534,0.485510353031154,0.377690453926732,0.709638518536602,3.67093504323363,0,0,0,0.194429899074283,3.63964696225943,0,0,0,0,0,0.286533439938757,0,0,0,0,1.69422266034566,2.66788438833342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,1.68533304158102,2.89731548382698,2.85764605063156,5.3000936176551,0,0,0,0,30.7417278235924,36.2304607629391,38.9253822661383,3.19714863213368,0,0,0.173485326766136,0,0.230615497256059,0,0,0,2.96633961281249,0.289198713839823,1.76922110389975,0.161766849947409,0.220841518460394,0,41.0061874679869,0,0.209446706813455,20.1811073614787,0.11981512450592,0,0,0,0,0,0,0.255715457330331,0,0.162241263067758,1.12023300235348,7.0911973247753,20.4705434331277,0.631325567659422,0,0,0.720248519221397,0.90422890701429,0.272145996605311,0.384341160854549,0.374806898238915,0.517406741478031,0.431135985865684,0.945530400839096,0.351902248327898,1.53437012699302,5.28289773528636,13.9300866608867,19.3435208223467,0.796137067273973,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0.330418782983798,6.87571473325215,0,0.232236671860439,1.54640953586512,2.01683524623343,1.11189021922435,1.71203063501303,1.42358718463353,0.658795818896044,1.50801125280162,2.18852119245266,2.53453313254856,5.39291645192533,7.99710784536369,10.1562049359727,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0.670025029767263,0,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,1.14704320301017,0.345369963731791,0.144649058581512,0,0,0,0.827810238914197,0,0,2.95082901678016,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.651547837414304,0.659880491890142,0,0,0,0,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0.913394847343798,0.469343416127421,1.0591603543191,0.882113592219848,38.9131556941893,22.1206264573391,26.1154964938915,44.7646290011762,37.7524069413641,4.37221254944776,0,0,0,0,0,0,0,1.69978429993855,1.6794174278839,1.93479963326193,12.4107180341965,0,0.406638934253697,1.51207477150522,3.76358932826044,1.9652630737156,4.72025212346872,2.31429676030941,10.7319936213452,16.8499465279331,0.621339313086926,0,0.897099276263873,0.66183396182839,0,0.258319646955462,0,0.117357238645754,0.911430693907651,0.209718688851422,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0.233753804363138,15.1909357022192,9.98936790183291,6.36968381927277,3.35769232728157,1.15913756419314,0,2.01466786693992,11.3615240911905,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,1.94485373654635,0.419226325255965,1.2869045591501,1.55572709461131,1.64828045791115,0.320919209591815,1.01078884705519,0.760437899670719,1.32038438970253,0.655490552289177,0.768301828858431,0.746661096422973,1.42888107384922,0.463537303779422,0.77163688185482,1.23625770240992,0.735994600671987,1.37147700954166,0.70990322463735,1.1921809497366,0.872078499793971,0.564656282491984,1.09998990259179,1.28049581010941,1.31534855718921,0.950628796921032,1.68342681497322,0.118635018124174,1.28055827088233,0.818462086339379,0.77468420592983,5.40138510747196,9.74261253957989,5.6143586026898,6.01638951335235,3.63447830930802,7.27951683094401,0.927471342481686|short_description=p2@Gjb3}} | ||
|EntrezGene=14620 | |||
|HGNC= | |||
|UniProt=P28231,A2A8M5 | |||
|association_with_transcript=0bp_to_ENSMUST00000046532,NM_001160012,uc008uut.2_5end | |||
|description=CAGE_peak_2_at_Gjb3_5end | |||
|id=chr4:127008043..127008089,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.17e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.88e-09!15;UBERON:0001242!2.51e-07!13;UBERON:0000060!2.51e-07!13;UBERON:0001262!2.51e-07!13;UBERON:0004786!2.51e-07!13;UBERON:0005409!2.53e-07!59;UBERON:0000160!4.03e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.57e-15,47;UBERON:0000160,4.08e-15,31;UBERON:0000344,2.31e-10,15;UBERON:0001242,2.83e-08,13;UBERON:0001262,2.83e-08,13;UBERON:0004786,2.83e-08,13;UBERON:0000014,8.03e-07,5;UBERON:0001003,8.03e-07,5;UBERON:0002097,8.03e-07,5;UBERON:0002199,8.03e-07,5;UBERON:0007029,8.03e-07,5;UBERON:0007376,8.03e-07,5;UBERON:0002416,8.03e-07,5;UBERON:0007383,8.03e-07,5 | |||
|phase1_expression=0.160148847104794,6.2815573375085,3.63999391511629,0.60492842261366,1.50268718983904,9.56911849897772,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,120.154309517848,145.445484196586,4.59385571292016,13.7843838770904,9.04979177280734,29.6436534351943,22.6827116783938,24.3903561720835,0,0,0,10.1098066912946,10.3065480122265,11.0251452381679,1.67412652294763,0.7813353445238,1.57057123192139,1.17646297606203,2.04913645487534,0.485510353031154,0.377690453926732,0.709638518536602,3.67093504323363,0,0,0,0.194429899074283,3.63964696225943,0,0,0,0,0,0.286533439938757,0,0,0,0,1.69422266034566,2.66788438833342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,1.68533304158102,2.89731548382698,2.85764605063156,5.3000936176551,0,0,0,0,30.7417278235924,36.2304607629391,38.9253822661383,3.19714863213368,0,0,0.173485326766136,0,0.230615497256059,0,0,0,2.96633961281249,0.289198713839823,1.76922110389975,0.161766849947409,0.220841518460394,0,41.0061874679869,0,0.209446706813455,20.1811073614787,0.11981512450592,0,0,0,0,0,0,0.255715457330331,0,0.162241263067758,1.12023300235348,7.0911973247753,20.4705434331277,0.631325567659422,0,0,0.720248519221397,0.90422890701429,0.272145996605311,0.384341160854549,0.374806898238915,0.517406741478031,0.431135985865684,0.945530400839096,0.351902248327898,1.53437012699302,5.28289773528636,13.9300866608867,19.3435208223467,0.796137067273973,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0.330418782983798,6.87571473325215,0,0.232236671860439,1.54640953586512,2.01683524623343,1.11189021922435,1.71203063501303,1.42358718463353,0.658795818896044,1.50801125280162,2.18852119245266,2.53453313254856,5.39291645192533,7.99710784536369,10.1562049359727,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0.670025029767263,0,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,1.14704320301017,0.345369963731791,0.144649058581512,0,0,0,0.827810238914197,0,0,2.95082901678016,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.651547837414304,0.659880491890142,0,0,0,0,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0.913394847343798,0.469343416127421,1.0591603543191,0.882113592219848,38.9131556941893,22.1206264573391,26.1154964938915,44.7646290011762,37.7524069413641,4.37221254944776,0,0,0,0,0,0,0,1.69978429993855,1.6794174278839,1.93479963326193,12.4107180341965,0,0.406638934253697,1.51207477150522,3.76358932826044,1.9652630737156,4.72025212346872,2.31429676030941,10.7319936213452,16.8499465279331,0.621339313086926,0,0.897099276263873,0.66183396182839,0,0.258319646955462,0,0.117357238645754,0.911430693907651,0.209718688851422,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0.233753804363138,15.1909357022192,9.98936790183291,6.36968381927277,3.35769232728157,1.15913756419314,0,2.01466786693992,11.3615240911905,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,1.94485373654635,0.419226325255965,1.2869045591501,1.55572709461131,1.64828045791115,0.320919209591815,1.01078884705519,0.760437899670719,1.32038438970253,0.655490552289177,0.768301828858431,0.746661096422973,1.42888107384922,0.463537303779422,0.77163688185482,1.23625770240992,0.735994600671987,1.37147700954166,0.70990322463735,1.1921809497366,0.872078499793971,0.564656282491984,1.09998990259179,1.28049581010941,1.31534855718921,0.950628796921032,1.68342681497322,0.118635018124174,1.28055827088233,0.818462086339379,0.77468420592983,5.40138510747196,9.74261253957989,5.6143586026898,6.01638951335235,3.63447830930802,7.27951683094401,0.927471342481686 | |||
|short_description=p2@Gjb3 | |||
}} |
Revision as of 03:48, 14 September 2013
Short description: | p2@Gjb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gjb3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000046532, NM_001160012, uc008uut.2_5end |
EntrezGene: | Gjb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.57e-15 | 47 |
intestine | 4.08e-15 | 31 |
mucosa | 2.31e-10 | 15 |
intestinal mucosa | 2.83e-08 | 13 |
wall of intestine | 2.83e-08 | 13 |
gastrointestinal system mucosa | 2.83e-08 | 13 |
zone of skin | 8.03e-07 | 5 |
skin epidermis | 8.03e-07 | 5 |
skin of body | 8.03e-07 | 5 |
integument | 8.03e-07 | 5 |
surface | 8.03e-07 | 5 |
outer epithelium | 8.03e-07 | 5 |
integumental system | 8.03e-07 | 5 |
enveloping layer of ectoderm | 8.03e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.