FFCP PHASE1:Mm9::chr7:109398216..109398228,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1066|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:109398216..109398228,+|id=chr7:109398216..109398228,+|ontology_enrichment_celltype=CL:0000791!1.18e-23!9;CL:0000789!1.18e-23!9;CL:0002420!1.18e-23!9;CL:0002419!1.18e-23!9;CL:0000790!1.18e-23!9;CL:0000624!1.95e-21!8;CL:0000084!5.15e-19!11;CL:0000827!5.15e-19!11;CL:0000988!1.55e-17!32;CL:0002032!1.55e-17!32;CL:0000037!1.55e-17!32;CL:0000566!1.55e-17!32;CL:0000837!1.55e-17!32;CL:0000838!2.83e-17!12;CL:0000893!2.62e-16!6;CL:0002489!2.62e-16!6;CL:0000898!2.62e-16!6;CL:0000809!2.62e-16!6;CL:0000810!2.62e-16!6;CL:0000895!2.62e-16!6;CL:0000808!2.62e-16!6;CL:0000894!2.62e-16!6;CL:0000806!2.62e-16!6;CL:0000807!2.62e-16!6;CL:0000805!2.62e-16!6;CL:0002425!2.62e-16!6;CL:0002436!2.62e-16!6;CL:0002427!2.62e-16!6;CL:0002428!2.62e-16!6;CL:0002429!2.62e-16!6;CL:0002433!2.62e-16!6;CL:0002431!2.62e-16!6;CL:0002432!2.62e-16!6;CL:0000542!8.38e-16!13;CL:0000051!8.38e-16!13;CL:0002031!2.17e-15!25;CL:0000738!2.26e-14!17;CL:0002087!2.26e-14!17;CL:0002320!4.78e-11!46;CL:0000134!4.78e-11!46;CL:0000219!7.28e-09!54;CL:0000034!6.00e-08!97;CL:0000723!7.53e-08!91;CL:0000048!7.53e-08!91;CL:0000063!1.33e-07!66|ontology_enrichment_celltype_v019_2=CL:0000624,4.37e-63,8;CL:0000791,4.64e-56,9;CL:0000789,4.64e-56,9;CL:0002420,4.64e-56,9;CL:0002419,4.64e-56,9;CL:0000790,4.64e-56,9;CL:0000893,4.13e-47,6;CL:0002489,4.13e-47,6;CL:0000898,4.13e-47,6;CL:0000809,4.13e-47,6;CL:0000810,4.13e-47,6;CL:0000895,4.13e-47,6;CL:0000808,4.13e-47,6;CL:0000894,4.13e-47,6;CL:0000806,4.13e-47,6;CL:0000807,4.13e-47,6;CL:0000805,4.13e-47,6;CL:0002425,4.13e-47,6;CL:0002436,4.13e-47,6;CL:0002427,4.13e-47,6;CL:0002428,4.13e-47,6;CL:0002429,4.13e-47,6;CL:0002433,4.13e-47,6;CL:0002431,4.13e-47,6;CL:0002432,4.13e-47,6;CL:0000084,7.80e-46,11;CL:0000827,7.80e-46,11;CL:0000838,5.37e-42,12;CL:0000542,9.51e-39,13;CL:0000051,9.51e-39,13;CL:0000738,1.45e-29,17;CL:0002087,1.45e-29,17;CL:0002031,5.41e-20,25;CL:0000988,1.58e-15,32;CL:0002032,1.58e-15,32;CL:0000037,1.58e-15,32;CL:0000837,1.58e-15,32;CL:0002320,1.19e-10,46;CL:0000134,1.19e-10,46;CL:0000815,2.09e-09,1;CL:0000792,2.09e-09,1;CL:0000219,5.46e-09,54;CL:0000723,4.07e-08,91;CL:0000048,4.07e-08,91;CL:0000034,1.46e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,9.49e-12,3;DOID:4045,9.49e-12,3|ontology_enrichment_uberon=UBERON:0002390!4.35e-14!45;UBERON:0003061!4.35e-14!45;UBERON:0002370!2.27e-13!23;UBERON:0000974!2.27e-13!23;UBERON:0004807!2.27e-13!23;UBERON:0005058!2.27e-13!23;UBERON:0003351!2.27e-13!23;UBERON:0009113!2.27e-13!23;UBERON:0003295!2.27e-13!23;UBERON:0009722!2.27e-13!23;UBERON:0005562!2.27e-13!23;UBERON:0007690!2.27e-13!23;UBERON:0002193!6.03e-13!48;UBERON:0006562!1.05e-12!24;UBERON:0003408!1.05e-12!24;UBERON:0001557!1.05e-12!24;UBERON:0001042!1.05e-12!24;UBERON:0008814!1.05e-12!24;UBERON:0009145!1.05e-12!24;UBERON:0002384!4.78e-11!46;UBERON:0000072!5.26e-11!27;UBERON:0004177!4.53e-10!29;UBERON:0000065!6.48e-09!41;UBERON:0001004!1.25e-08!42;UBERON:0000063!6.50e-08!35;UBERON:0002405!1.34e-07!70;UBERON:0003081!8.57e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.90e-12,23;UBERON:0000974,2.90e-12,23;UBERON:0004807,2.90e-12,23;UBERON:0005058,2.90e-12,23;UBERON:0003351,2.90e-12,23;UBERON:0009113,2.90e-12,23;UBERON:0003295,2.90e-12,23;UBERON:0009722,2.90e-12,23;UBERON:0005562,2.90e-12,23;UBERON:0007690,2.90e-12,23;UBERON:0006562,9.55e-12,24;UBERON:0003408,9.55e-12,24;UBERON:0001557,9.55e-12,24;UBERON:0001042,9.55e-12,24;UBERON:0008814,9.55e-12,24;UBERON:0009145,9.55e-12,24;UBERON:0002384,1.19e-10,46;UBERON:0000072,2.01e-10,27;UBERON:0004177,1.09e-09,29;UBERON:0005057,1.09e-09,29;UBERON:0000077,5.41e-08,35;UBERON:0007811,9.16e-08,36;UBERON:0000490,3.31e-07,66;UBERON:0000065,8.69e-07,41|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,4.08287294239834,3.04283884218592,2.91070545983358,1.7549874978974,1.88320802924326,1.92324885321794,0.333109761815663,0,0,0.157731082679119,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,2.09265815368454,3.1253413780952,0,0.588231488031014,2.04913645487534,0.485510353031154,0,0,0,0,0,0,0,0,0,0,4.35217285206807,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0.100966449948148,0.228620419965,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:109398216..109398228,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1066 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:109398216..109398228,+ | |||
|id=chr7:109398216..109398228,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.18e-23!9;CL:0000789!1.18e-23!9;CL:0002420!1.18e-23!9;CL:0002419!1.18e-23!9;CL:0000790!1.18e-23!9;CL:0000624!1.95e-21!8;CL:0000084!5.15e-19!11;CL:0000827!5.15e-19!11;CL:0000988!1.55e-17!32;CL:0002032!1.55e-17!32;CL:0000037!1.55e-17!32;CL:0000566!1.55e-17!32;CL:0000837!1.55e-17!32;CL:0000838!2.83e-17!12;CL:0000893!2.62e-16!6;CL:0002489!2.62e-16!6;CL:0000898!2.62e-16!6;CL:0000809!2.62e-16!6;CL:0000810!2.62e-16!6;CL:0000895!2.62e-16!6;CL:0000808!2.62e-16!6;CL:0000894!2.62e-16!6;CL:0000806!2.62e-16!6;CL:0000807!2.62e-16!6;CL:0000805!2.62e-16!6;CL:0002425!2.62e-16!6;CL:0002436!2.62e-16!6;CL:0002427!2.62e-16!6;CL:0002428!2.62e-16!6;CL:0002429!2.62e-16!6;CL:0002433!2.62e-16!6;CL:0002431!2.62e-16!6;CL:0002432!2.62e-16!6;CL:0000542!8.38e-16!13;CL:0000051!8.38e-16!13;CL:0002031!2.17e-15!25;CL:0000738!2.26e-14!17;CL:0002087!2.26e-14!17;CL:0002320!4.78e-11!46;CL:0000134!4.78e-11!46;CL:0000219!7.28e-09!54;CL:0000034!6.00e-08!97;CL:0000723!7.53e-08!91;CL:0000048!7.53e-08!91;CL:0000063!1.33e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.37e-63,8;CL:0000791,4.64e-56,9;CL:0000789,4.64e-56,9;CL:0002420,4.64e-56,9;CL:0002419,4.64e-56,9;CL:0000790,4.64e-56,9;CL:0000893,4.13e-47,6;CL:0002489,4.13e-47,6;CL:0000898,4.13e-47,6;CL:0000809,4.13e-47,6;CL:0000810,4.13e-47,6;CL:0000895,4.13e-47,6;CL:0000808,4.13e-47,6;CL:0000894,4.13e-47,6;CL:0000806,4.13e-47,6;CL:0000807,4.13e-47,6;CL:0000805,4.13e-47,6;CL:0002425,4.13e-47,6;CL:0002436,4.13e-47,6;CL:0002427,4.13e-47,6;CL:0002428,4.13e-47,6;CL:0002429,4.13e-47,6;CL:0002433,4.13e-47,6;CL:0002431,4.13e-47,6;CL:0002432,4.13e-47,6;CL:0000084,7.80e-46,11;CL:0000827,7.80e-46,11;CL:0000838,5.37e-42,12;CL:0000542,9.51e-39,13;CL:0000051,9.51e-39,13;CL:0000738,1.45e-29,17;CL:0002087,1.45e-29,17;CL:0002031,5.41e-20,25;CL:0000988,1.58e-15,32;CL:0002032,1.58e-15,32;CL:0000037,1.58e-15,32;CL:0000837,1.58e-15,32;CL:0002320,1.19e-10,46;CL:0000134,1.19e-10,46;CL:0000815,2.09e-09,1;CL:0000792,2.09e-09,1;CL:0000219,5.46e-09,54;CL:0000723,4.07e-08,91;CL:0000048,4.07e-08,91;CL:0000034,1.46e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.49e-12,3;DOID:4045,9.49e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.35e-14!45;UBERON:0003061!4.35e-14!45;UBERON:0002370!2.27e-13!23;UBERON:0000974!2.27e-13!23;UBERON:0004807!2.27e-13!23;UBERON:0005058!2.27e-13!23;UBERON:0003351!2.27e-13!23;UBERON:0009113!2.27e-13!23;UBERON:0003295!2.27e-13!23;UBERON:0009722!2.27e-13!23;UBERON:0005562!2.27e-13!23;UBERON:0007690!2.27e-13!23;UBERON:0002193!6.03e-13!48;UBERON:0006562!1.05e-12!24;UBERON:0003408!1.05e-12!24;UBERON:0001557!1.05e-12!24;UBERON:0001042!1.05e-12!24;UBERON:0008814!1.05e-12!24;UBERON:0009145!1.05e-12!24;UBERON:0002384!4.78e-11!46;UBERON:0000072!5.26e-11!27;UBERON:0004177!4.53e-10!29;UBERON:0000065!6.48e-09!41;UBERON:0001004!1.25e-08!42;UBERON:0000063!6.50e-08!35;UBERON:0002405!1.34e-07!70;UBERON:0003081!8.57e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.90e-12,23;UBERON:0000974,2.90e-12,23;UBERON:0004807,2.90e-12,23;UBERON:0005058,2.90e-12,23;UBERON:0003351,2.90e-12,23;UBERON:0009113,2.90e-12,23;UBERON:0003295,2.90e-12,23;UBERON:0009722,2.90e-12,23;UBERON:0005562,2.90e-12,23;UBERON:0007690,2.90e-12,23;UBERON:0006562,9.55e-12,24;UBERON:0003408,9.55e-12,24;UBERON:0001557,9.55e-12,24;UBERON:0001042,9.55e-12,24;UBERON:0008814,9.55e-12,24;UBERON:0009145,9.55e-12,24;UBERON:0002384,1.19e-10,46;UBERON:0000072,2.01e-10,27;UBERON:0004177,1.09e-09,29;UBERON:0005057,1.09e-09,29;UBERON:0000077,5.41e-08,35;UBERON:0007811,9.16e-08,36;UBERON:0000490,3.31e-07,66;UBERON:0000065,8.69e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,4.08287294239834,3.04283884218592,2.91070545983358,1.7549874978974,1.88320802924326,1.92324885321794,0.333109761815663,0,0,0.157731082679119,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,2.09265815368454,3.1253413780952,0,0.588231488031014,2.04913645487534,0.485510353031154,0,0,0,0,0,0,0,0,0,0,4.35217285206807,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0.100966449948148,0.228620419965,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:109398216..109398228,+ | |||
}} |
Revision as of 11:21, 14 September 2013
Short description: | p@chr7:109398216..109398228, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:109398216..109398228, + |
Coexpression cluster: | MCL_coexpression_mm9:1066 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.90e-12 | 23 |
neck | 2.90e-12 | 23 |
respiratory system epithelium | 2.90e-12 | 23 |
hemolymphoid system gland | 2.90e-12 | 23 |
pharyngeal epithelium | 2.90e-12 | 23 |
thymic region | 2.90e-12 | 23 |
pharyngeal gland | 2.90e-12 | 23 |
entire pharyngeal arch endoderm | 2.90e-12 | 23 |
thymus primordium | 2.90e-12 | 23 |
early pharyngeal endoderm | 2.90e-12 | 23 |
pharynx | 9.55e-12 | 24 |
gland of gut | 9.55e-12 | 24 |
upper respiratory tract | 9.55e-12 | 24 |
chordate pharynx | 9.55e-12 | 24 |
pharyngeal arch system | 9.55e-12 | 24 |
pharyngeal region of foregut | 9.55e-12 | 24 |
connective tissue | 1.19e-10 | 46 |
segment of respiratory tract | 2.01e-10 | 27 |
hemopoietic organ | 1.09e-09 | 29 |
immune organ | 1.09e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 5.41e-08 | 35 |
craniocervical region | 9.16e-08 | 36 |
unilaminar epithelium | 3.31e-07 | 66 |
respiratory tract | 8.69e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.49e-12 | 3 |
muscle cancer | 9.49e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.