FFCP PHASE1:Mm9::chr16:5007752..5007786,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:5007752..5007786,+|id=chr16:5007752..5007786,+|ontology_enrichment_celltype=CL:0000075!2.86e-10!7;CL:0000239!1.10e-09!6;CL:0000677!1.10e-09!6;CL:0000212!1.10e-09!6;CL:0000584!1.10e-09!6;CL:0002563!1.13e-07!9;CL:0002251!1.13e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.83e-19,6;CL:0000677,1.83e-19,6;CL:0000584,1.83e-19,6;CL:0000075,1.35e-16,7;CL:0002563,9.11e-13,9;CL:0002251,9.11e-13,9;CL:0000682,7.72e-11,3;CL:0000066,2.54e-09,25;CL:0002076,2.15e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.12e-21!43;UBERON:0005409!7.00e-17!59;UBERON:0000344!2.00e-15!15;UBERON:0001242!6.76e-13!13;UBERON:0000060!6.76e-13!13;UBERON:0001262!6.76e-13!13;UBERON:0004786!6.76e-13!13;UBERON:0004923!6.37e-11!24;UBERON:0003350!1.13e-07!9;UBERON:0004808!1.13e-07!9;UBERON:0001277!1.13e-07!9;UBERON:0004119!1.73e-07!130;UBERON:0000925!1.73e-07!130;UBERON:0006595!1.73e-07!130;UBERON:0000485!1.97e-07!11;UBERON:0001007!3.39e-07!128;UBERON:0001555!3.39e-07!128;UBERON:0007026!3.39e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.65e-45,31;UBERON:0000344,1.91e-29,15;UBERON:0005409,4.53e-28,47;UBERON:0001242,6.14e-24,13;UBERON:0001262,6.14e-24,13;UBERON:0004786,6.14e-24,13;UBERON:0004923,2.30e-20,24;UBERON:0002108,2.81e-13,4;UBERON:0003350,9.11e-13,9;UBERON:0004808,9.11e-13,9;UBERON:0001277,9.11e-13,9;UBERON:0001007,5.32e-11,116;UBERON:0001555,5.32e-11,116;UBERON:0007026,5.32e-11,116;UBERON:0000331,9.64e-11,3;UBERON:0002116,9.64e-11,3;UBERON:0001204,9.64e-11,3;UBERON:0001168,9.64e-11,3;UBERON:0004119,9.84e-11,118;UBERON:0000925,9.84e-11,118;UBERON:0006595,9.84e-11,118;UBERON:0000485,2.51e-10,11;UBERON:0004921,5.74e-09,114;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2|phase1_expression=0,22.3344260889191,21.3849642513082,30.5488853419898,25.5456822272637,4.70061961353291,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,4.81759490241057,36.1766137392463,22.830385796431,8.83432054012145,24.5130211098722,31.5037662199913,5.54326276638262,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,9.19645398750929,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,4.23120906661671,0,0.232236671860439,0.257734922644187,1.4117846723634,0.889512175379481,1.33157938278791,3.79623249235609,3.62337700392824,2.01068167040216,2.38747766449381,0.779856348476481,4.49409704327111,5.61958929674205,10.3553462092271,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.627994911365499,0.493588655687202,0.889357881261447,0,0,0,0.405720242777006,0,0,0.863088412352432,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.70990322463735,0,0,0,0.0846146078916765,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr16:5007752..5007786,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:5007752..5007786,+ | |||
|id=chr16:5007752..5007786,+ | |||
|ontology_enrichment_celltype=CL:0000075!2.86e-10!7;CL:0000239!1.10e-09!6;CL:0000677!1.10e-09!6;CL:0000212!1.10e-09!6;CL:0000584!1.10e-09!6;CL:0002563!1.13e-07!9;CL:0002251!1.13e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.83e-19,6;CL:0000677,1.83e-19,6;CL:0000584,1.83e-19,6;CL:0000075,1.35e-16,7;CL:0002563,9.11e-13,9;CL:0002251,9.11e-13,9;CL:0000682,7.72e-11,3;CL:0000066,2.54e-09,25;CL:0002076,2.15e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.12e-21!43;UBERON:0005409!7.00e-17!59;UBERON:0000344!2.00e-15!15;UBERON:0001242!6.76e-13!13;UBERON:0000060!6.76e-13!13;UBERON:0001262!6.76e-13!13;UBERON:0004786!6.76e-13!13;UBERON:0004923!6.37e-11!24;UBERON:0003350!1.13e-07!9;UBERON:0004808!1.13e-07!9;UBERON:0001277!1.13e-07!9;UBERON:0004119!1.73e-07!130;UBERON:0000925!1.73e-07!130;UBERON:0006595!1.73e-07!130;UBERON:0000485!1.97e-07!11;UBERON:0001007!3.39e-07!128;UBERON:0001555!3.39e-07!128;UBERON:0007026!3.39e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.65e-45,31;UBERON:0000344,1.91e-29,15;UBERON:0005409,4.53e-28,47;UBERON:0001242,6.14e-24,13;UBERON:0001262,6.14e-24,13;UBERON:0004786,6.14e-24,13;UBERON:0004923,2.30e-20,24;UBERON:0002108,2.81e-13,4;UBERON:0003350,9.11e-13,9;UBERON:0004808,9.11e-13,9;UBERON:0001277,9.11e-13,9;UBERON:0001007,5.32e-11,116;UBERON:0001555,5.32e-11,116;UBERON:0007026,5.32e-11,116;UBERON:0000331,9.64e-11,3;UBERON:0002116,9.64e-11,3;UBERON:0001204,9.64e-11,3;UBERON:0001168,9.64e-11,3;UBERON:0004119,9.84e-11,118;UBERON:0000925,9.84e-11,118;UBERON:0006595,9.84e-11,118;UBERON:0000485,2.51e-10,11;UBERON:0004921,5.74e-09,114;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2 | |||
|phase1_expression=0,22.3344260889191,21.3849642513082,30.5488853419898,25.5456822272637,4.70061961353291,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,4.81759490241057,36.1766137392463,22.830385796431,8.83432054012145,24.5130211098722,31.5037662199913,5.54326276638262,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,9.19645398750929,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,4.23120906661671,0,0.232236671860439,0.257734922644187,1.4117846723634,0.889512175379481,1.33157938278791,3.79623249235609,3.62337700392824,2.01068167040216,2.38747766449381,0.779856348476481,4.49409704327111,5.61958929674205,10.3553462092271,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.627994911365499,0.493588655687202,0.889357881261447,0,0,0,0.405720242777006,0,0,0.863088412352432,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.70990322463735,0,0,0,0.0846146078916765,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:5007752..5007786,+ | |||
}} |
Revision as of 12:52, 13 September 2013
Short description: | p@chr16:5007752..5007786, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:5007752..5007786, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.83e-19 | 6 |
gut absorptive cell | 1.83e-19 | 6 |
enterocyte | 1.83e-19 | 6 |
columnar/cuboidal epithelial cell | 1.35e-16 | 7 |
intestinal epithelial cell | 9.11e-13 | 9 |
epithelial cell of alimentary canal | 9.11e-13 | 9 |
M cell of gut | 7.72e-11 | 3 |
epithelial cell | 2.54e-09 | 25 |
endo-epithelial cell | 2.15e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.65e-45 | 31 |
mucosa | 1.91e-29 | 15 |
gastrointestinal system | 4.53e-28 | 47 |
intestinal mucosa | 6.14e-24 | 13 |
wall of intestine | 6.14e-24 | 13 |
gastrointestinal system mucosa | 6.14e-24 | 13 |
organ component layer | 2.30e-20 | 24 |
small intestine | 2.81e-13 | 4 |
epithelium of mucosa | 9.11e-13 | 9 |
gastrointestinal system epithelium | 9.11e-13 | 9 |
intestinal epithelium | 9.11e-13 | 9 |
digestive system | 5.32e-11 | 116 |
digestive tract | 5.32e-11 | 116 |
primitive gut | 5.32e-11 | 116 |
ileal mucosa | 9.64e-11 | 3 |
ileum | 9.64e-11 | 3 |
mucosa of small intestine | 9.64e-11 | 3 |
wall of small intestine | 9.64e-11 | 3 |
endoderm-derived structure | 9.84e-11 | 118 |
endoderm | 9.84e-11 | 118 |
presumptive endoderm | 9.84e-11 | 118 |
simple columnar epithelium | 2.51e-10 | 11 |
subdivision of digestive tract | 5.74e-09 | 114 |
gut-associated lymphoid tissue | 3.22e-07 | 2 |
mucosa-associated lymphoid tissue | 3.22e-07 | 2 |
lymphoid tissue | 3.22e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.