FFCP PHASE1:Mm9::chr9:46050719..46050738,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=615|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46050719..46050738,-|id=chr9:46050719..46050738,-|ontology_enrichment_celltype=CL:0000239!1.40e-09!6;CL:0000677!1.40e-09!6;CL:0000212!1.40e-09!6;CL:0000584!1.40e-09!6;CL:0000075!4.63e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,6.20e-13,6;CL:0000677,6.20e-13,6;CL:0000584,6.20e-13,6;CL:0000075,4.69e-11,7;CL:0000682,2.71e-10,3;CL:0000066,6.99e-09,25;CL:0002563,1.52e-08,9;CL:0002251,1.52e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.14e-17!43;UBERON:0005409!6.51e-14!59;UBERON:0000344!2.59e-13!15;UBERON:0001242!2.15e-10!13;UBERON:0000060!2.15e-10!13;UBERON:0001262!2.15e-10!13;UBERON:0004786!2.15e-10!13;UBERON:0004923!6.12e-10!24;UBERON:0004119!3.84e-07!130;UBERON:0000925!3.84e-07!130;UBERON:0006595!3.84e-07!130;UBERON:0001007!8.78e-07!128;UBERON:0001555!8.78e-07!128;UBERON:0007026!8.78e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.88e-34,31;UBERON:0005409,2.63e-21,47;UBERON:0000344,5.74e-16,15;UBERON:0004923,1.36e-11,24;UBERON:0001242,6.34e-11,13;UBERON:0001262,6.34e-11,13;UBERON:0004786,6.34e-11,13;UBERON:0001007,1.37e-10,116;UBERON:0001555,1.37e-10,116;UBERON:0007026,1.37e-10,116;UBERON:0004119,2.48e-10,118;UBERON:0000925,2.48e-10,118;UBERON:0006595,2.48e-10,118;UBERON:0003350,1.52e-08,9;UBERON:0004808,1.52e-08,9;UBERON:0001277,1.52e-08,9;UBERON:0004921,1.95e-08,114;UBERON:0001962,3.40e-08,2;UBERON:0001961,3.40e-08,2;UBERON:0001744,3.40e-08,2;UBERON:0000485,6.05e-07,11|phase1_expression=0,6.63053274514786,9.09998478779072,2.41971369045464,1.50268718983904,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5194544411253,25.9232487605902,6.31655160526522,3.01533397311352,5.60225204983311,0.570070258369122,0.252030129759931,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11974200336975,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,5.02456076660734,0,0,0,0.201683524623343,0.889512175379481,3.04361001780095,6.16887780007865,7.41145296258049,20.8608223304224,21.4872989804443,9.35827618171777,4.49409704327111,5.61958929674205,5.17767310461355,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.486405680325106,1.09824565275233,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,13.9910801582328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.64183841918363,0,0,0,0.37456602987953,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.365855945745545,0,0,0,0,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p@chr9:46050719..46050738,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=615 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:46050719..46050738,- | |||
|id=chr9:46050719..46050738,- | |||
|ontology_enrichment_celltype=CL:0000239!1.40e-09!6;CL:0000677!1.40e-09!6;CL:0000212!1.40e-09!6;CL:0000584!1.40e-09!6;CL:0000075!4.63e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.20e-13,6;CL:0000677,6.20e-13,6;CL:0000584,6.20e-13,6;CL:0000075,4.69e-11,7;CL:0000682,2.71e-10,3;CL:0000066,6.99e-09,25;CL:0002563,1.52e-08,9;CL:0002251,1.52e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.14e-17!43;UBERON:0005409!6.51e-14!59;UBERON:0000344!2.59e-13!15;UBERON:0001242!2.15e-10!13;UBERON:0000060!2.15e-10!13;UBERON:0001262!2.15e-10!13;UBERON:0004786!2.15e-10!13;UBERON:0004923!6.12e-10!24;UBERON:0004119!3.84e-07!130;UBERON:0000925!3.84e-07!130;UBERON:0006595!3.84e-07!130;UBERON:0001007!8.78e-07!128;UBERON:0001555!8.78e-07!128;UBERON:0007026!8.78e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.88e-34,31;UBERON:0005409,2.63e-21,47;UBERON:0000344,5.74e-16,15;UBERON:0004923,1.36e-11,24;UBERON:0001242,6.34e-11,13;UBERON:0001262,6.34e-11,13;UBERON:0004786,6.34e-11,13;UBERON:0001007,1.37e-10,116;UBERON:0001555,1.37e-10,116;UBERON:0007026,1.37e-10,116;UBERON:0004119,2.48e-10,118;UBERON:0000925,2.48e-10,118;UBERON:0006595,2.48e-10,118;UBERON:0003350,1.52e-08,9;UBERON:0004808,1.52e-08,9;UBERON:0001277,1.52e-08,9;UBERON:0004921,1.95e-08,114;UBERON:0001962,3.40e-08,2;UBERON:0001961,3.40e-08,2;UBERON:0001744,3.40e-08,2;UBERON:0000485,6.05e-07,11 | |||
|phase1_expression=0,6.63053274514786,9.09998478779072,2.41971369045464,1.50268718983904,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5194544411253,25.9232487605902,6.31655160526522,3.01533397311352,5.60225204983311,0.570070258369122,0.252030129759931,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11974200336975,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,5.02456076660734,0,0,0,0.201683524623343,0.889512175379481,3.04361001780095,6.16887780007865,7.41145296258049,20.8608223304224,21.4872989804443,9.35827618171777,4.49409704327111,5.61958929674205,5.17767310461355,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.486405680325106,1.09824565275233,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,13.9910801582328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.64183841918363,0,0,0,0.37456602987953,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.365855945745545,0,0,0,0,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p@chr9:46050719..46050738,- | |||
}} |
Revision as of 18:04, 14 September 2013
Short description: | p@chr9:46050719..46050738, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050719..46050738, - |
Coexpression cluster: | MCL_coexpression_mm9:615 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.20e-13 | 6 |
gut absorptive cell | 6.20e-13 | 6 |
enterocyte | 6.20e-13 | 6 |
columnar/cuboidal epithelial cell | 4.69e-11 | 7 |
M cell of gut | 2.71e-10 | 3 |
epithelial cell | 6.99e-09 | 25 |
intestinal epithelial cell | 1.52e-08 | 9 |
epithelial cell of alimentary canal | 1.52e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.88e-34 | 31 |
gastrointestinal system | 2.63e-21 | 47 |
mucosa | 5.74e-16 | 15 |
organ component layer | 1.36e-11 | 24 |
intestinal mucosa | 6.34e-11 | 13 |
wall of intestine | 6.34e-11 | 13 |
gastrointestinal system mucosa | 6.34e-11 | 13 |
digestive system | 1.37e-10 | 116 |
digestive tract | 1.37e-10 | 116 |
primitive gut | 1.37e-10 | 116 |
endoderm-derived structure | 2.48e-10 | 118 |
endoderm | 2.48e-10 | 118 |
presumptive endoderm | 2.48e-10 | 118 |
epithelium of mucosa | 1.52e-08 | 9 |
gastrointestinal system epithelium | 1.52e-08 | 9 |
intestinal epithelium | 1.52e-08 | 9 |
subdivision of digestive tract | 1.95e-08 | 114 |
gut-associated lymphoid tissue | 3.40e-08 | 2 |
mucosa-associated lymphoid tissue | 3.40e-08 | 2 |
lymphoid tissue | 3.40e-08 | 2 |
simple columnar epithelium | 6.05e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.