FFCP PHASE1:Mm9::chr9:123840094..123840116,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=81|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:123840094..123840116,+|id=chr9:123840094..123840116,+|ontology_enrichment_celltype=CL:0000063!3.74e-25!66;CL:0000988!1.47e-21!32;CL:0002032!1.47e-21!32;CL:0000037!1.47e-21!32;CL:0000566!1.47e-21!32;CL:0000837!1.47e-21!32;CL:0002031!9.97e-21!25;CL:0002320!1.35e-18!46;CL:0000134!1.35e-18!46;CL:0000144!4.54e-18!121;CL:0000012!4.54e-18!121;CL:0000219!2.54e-17!54;CL:0002371!5.86e-16!118;CL:0000738!3.33e-15!17;CL:0002087!3.33e-15!17;CL:0000548!8.51e-15!115;CL:0000004!8.51e-15!115;CL:0000255!8.51e-15!115;CL:0000838!1.27e-14!12;CL:0000034!4.56e-14!97;CL:0000791!1.34e-13!9;CL:0000789!1.34e-13!9;CL:0002420!1.34e-13!9;CL:0002419!1.34e-13!9;CL:0000790!1.34e-13!9;CL:0000084!2.22e-13!11;CL:0000827!2.22e-13!11;CL:0000542!3.05e-13!13;CL:0000051!3.05e-13!13;CL:0000624!3.90e-12!8;CL:0000723!4.75e-10!91;CL:0000048!4.75e-10!91;CL:0000049!6.75e-10!19;CL:0000893!7.53e-10!6;CL:0002489!7.53e-10!6;CL:0000898!7.53e-10!6;CL:0000809!7.53e-10!6;CL:0000810!7.53e-10!6;CL:0000895!7.53e-10!6;CL:0000808!7.53e-10!6;CL:0000894!7.53e-10!6;CL:0000806!7.53e-10!6;CL:0000807!7.53e-10!6;CL:0000805!7.53e-10!6;CL:0002425!7.53e-10!6;CL:0002436!7.53e-10!6;CL:0002427!7.53e-10!6;CL:0002428!7.53e-10!6;CL:0002429!7.53e-10!6;CL:0002433!7.53e-10!6;CL:0002431!7.53e-10!6;CL:0002432!7.53e-10!6;CL:0000839!5.60e-08!13;CL:0000763!1.68e-07!16;CL:0000553!5.97e-07!6;CL:0000556!5.97e-07!6|ontology_enrichment_celltype_v019_2=CL:0002031,9.00e-29,25;CL:0000988,8.72e-27,32;CL:0002032,8.72e-27,32;CL:0000037,8.72e-27,32;CL:0000837,8.72e-27,32;CL:0000838,8.60e-26,12;CL:0002320,8.74e-24,46;CL:0000134,8.74e-24,46;CL:0000542,1.26e-23,13;CL:0000051,1.26e-23,13;CL:0000219,1.49e-23,54;CL:0000084,1.62e-23,11;CL:0000827,1.62e-23,11;CL:0000791,1.71e-23,9;CL:0000789,1.71e-23,9;CL:0002420,1.71e-23,9;CL:0002419,1.71e-23,9;CL:0000790,1.71e-23,9;CL:0000738,3.40e-21,17;CL:0002087,3.40e-21,17;CL:0000624,8.09e-21,8;CL:0000893,1.19e-16,6;CL:0002489,1.19e-16,6;CL:0000898,1.19e-16,6;CL:0000809,1.19e-16,6;CL:0000810,1.19e-16,6;CL:0000895,1.19e-16,6;CL:0000808,1.19e-16,6;CL:0000894,1.19e-16,6;CL:0000806,1.19e-16,6;CL:0000807,1.19e-16,6;CL:0000805,1.19e-16,6;CL:0002425,1.19e-16,6;CL:0002436,1.19e-16,6;CL:0002427,1.19e-16,6;CL:0002428,1.19e-16,6;CL:0002429,1.19e-16,6;CL:0002433,1.19e-16,6;CL:0002431,1.19e-16,6;CL:0002432,1.19e-16,6;CL:0000034,6.88e-12,97;CL:0000553,8.88e-12,6;CL:0000556,8.88e-12,6;CL:0000723,1.54e-09,91;CL:0000048,1.54e-09,91;CL:0000068,5.12e-08,3;CL:0002202,5.12e-08,3;CL:0000069,5.12e-08,3;CL:0002632,5.12e-08,3;CL:0002368,5.12e-08,3;CL:0000307,5.12e-08,3;CL:0000377,5.12e-08,3;CL:0000349,6.07e-08,3;CL:0000351,6.07e-08,3;CL:0000049,6.56e-08,19;CL:0000215,9.02e-08,3;CL:0000050,1.03e-07,9;CL:0000763,1.30e-07,16;CL:0000839,2.10e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.35e-18!46;UBERON:0000344!7.47e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.74e-24,46;UBERON:0002193,9.08e-10,48;UBERON:0002405,9.08e-10,48;UBERON:0003126,5.12e-08,3;UBERON:0001005,5.12e-08,3;UBERON:0007196,5.12e-08,3;UBERON:0001558,5.12e-08,3;UBERON:0000358,6.07e-08,3;UBERON:0000307,6.07e-08,3;UBERON:0007010,6.07e-08,3;UBERON:0002390,9.12e-08,45;UBERON:0003061,9.12e-08,45;UBERON:0002371,1.30e-07,16|phase1_expression=0.480446541314382,0,0,0.60492842261366,0,0,1.86890112476421,1.29123323441576,2.25261955442667,3.7450324211519,3.25314139628459,2.31339261086476,4.96482116800497,3.75907730401689,0,2.42970320867791,2.79824751251259,5.0473946457318,3.56497527374921,2.54633791078818,0,0,3.39559725880616,2.3998863419011,2.2940928106717,0,0.86152399231815,0.215471232685889,0.570070258369122,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0.837063261473815,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0,0,0,0,0,0,0,0,0,2.01339127269284,2.17608642603403,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36307147999731,1.5870027622425,1.44932244350839,2.58127163094416,0,0,0,0,0,0,1.55871602761721,0.70667914902068,0.563373679106722,0,0,0,1.29894624606728,1.52015919285059,2.52762222507392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03165135757089,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,1.99787358036658,1.34570784914214,1.84673078000486,0,0,0.183151624267265,0,0,0,0,0,1.54667864109319,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr9:123840094..123840116,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:123840094..123840116,+ | |||
|id=chr9:123840094..123840116,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.74e-25!66;CL:0000988!1.47e-21!32;CL:0002032!1.47e-21!32;CL:0000037!1.47e-21!32;CL:0000566!1.47e-21!32;CL:0000837!1.47e-21!32;CL:0002031!9.97e-21!25;CL:0002320!1.35e-18!46;CL:0000134!1.35e-18!46;CL:0000144!4.54e-18!121;CL:0000012!4.54e-18!121;CL:0000219!2.54e-17!54;CL:0002371!5.86e-16!118;CL:0000738!3.33e-15!17;CL:0002087!3.33e-15!17;CL:0000548!8.51e-15!115;CL:0000004!8.51e-15!115;CL:0000255!8.51e-15!115;CL:0000838!1.27e-14!12;CL:0000034!4.56e-14!97;CL:0000791!1.34e-13!9;CL:0000789!1.34e-13!9;CL:0002420!1.34e-13!9;CL:0002419!1.34e-13!9;CL:0000790!1.34e-13!9;CL:0000084!2.22e-13!11;CL:0000827!2.22e-13!11;CL:0000542!3.05e-13!13;CL:0000051!3.05e-13!13;CL:0000624!3.90e-12!8;CL:0000723!4.75e-10!91;CL:0000048!4.75e-10!91;CL:0000049!6.75e-10!19;CL:0000893!7.53e-10!6;CL:0002489!7.53e-10!6;CL:0000898!7.53e-10!6;CL:0000809!7.53e-10!6;CL:0000810!7.53e-10!6;CL:0000895!7.53e-10!6;CL:0000808!7.53e-10!6;CL:0000894!7.53e-10!6;CL:0000806!7.53e-10!6;CL:0000807!7.53e-10!6;CL:0000805!7.53e-10!6;CL:0002425!7.53e-10!6;CL:0002436!7.53e-10!6;CL:0002427!7.53e-10!6;CL:0002428!7.53e-10!6;CL:0002429!7.53e-10!6;CL:0002433!7.53e-10!6;CL:0002431!7.53e-10!6;CL:0002432!7.53e-10!6;CL:0000839!5.60e-08!13;CL:0000763!1.68e-07!16;CL:0000553!5.97e-07!6;CL:0000556!5.97e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,9.00e-29,25;CL:0000988,8.72e-27,32;CL:0002032,8.72e-27,32;CL:0000037,8.72e-27,32;CL:0000837,8.72e-27,32;CL:0000838,8.60e-26,12;CL:0002320,8.74e-24,46;CL:0000134,8.74e-24,46;CL:0000542,1.26e-23,13;CL:0000051,1.26e-23,13;CL:0000219,1.49e-23,54;CL:0000084,1.62e-23,11;CL:0000827,1.62e-23,11;CL:0000791,1.71e-23,9;CL:0000789,1.71e-23,9;CL:0002420,1.71e-23,9;CL:0002419,1.71e-23,9;CL:0000790,1.71e-23,9;CL:0000738,3.40e-21,17;CL:0002087,3.40e-21,17;CL:0000624,8.09e-21,8;CL:0000893,1.19e-16,6;CL:0002489,1.19e-16,6;CL:0000898,1.19e-16,6;CL:0000809,1.19e-16,6;CL:0000810,1.19e-16,6;CL:0000895,1.19e-16,6;CL:0000808,1.19e-16,6;CL:0000894,1.19e-16,6;CL:0000806,1.19e-16,6;CL:0000807,1.19e-16,6;CL:0000805,1.19e-16,6;CL:0002425,1.19e-16,6;CL:0002436,1.19e-16,6;CL:0002427,1.19e-16,6;CL:0002428,1.19e-16,6;CL:0002429,1.19e-16,6;CL:0002433,1.19e-16,6;CL:0002431,1.19e-16,6;CL:0002432,1.19e-16,6;CL:0000034,6.88e-12,97;CL:0000553,8.88e-12,6;CL:0000556,8.88e-12,6;CL:0000723,1.54e-09,91;CL:0000048,1.54e-09,91;CL:0000068,5.12e-08,3;CL:0002202,5.12e-08,3;CL:0000069,5.12e-08,3;CL:0002632,5.12e-08,3;CL:0002368,5.12e-08,3;CL:0000307,5.12e-08,3;CL:0000377,5.12e-08,3;CL:0000349,6.07e-08,3;CL:0000351,6.07e-08,3;CL:0000049,6.56e-08,19;CL:0000215,9.02e-08,3;CL:0000050,1.03e-07,9;CL:0000763,1.30e-07,16;CL:0000839,2.10e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.35e-18!46;UBERON:0000344!7.47e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.74e-24,46;UBERON:0002193,9.08e-10,48;UBERON:0002405,9.08e-10,48;UBERON:0003126,5.12e-08,3;UBERON:0001005,5.12e-08,3;UBERON:0007196,5.12e-08,3;UBERON:0001558,5.12e-08,3;UBERON:0000358,6.07e-08,3;UBERON:0000307,6.07e-08,3;UBERON:0007010,6.07e-08,3;UBERON:0002390,9.12e-08,45;UBERON:0003061,9.12e-08,45;UBERON:0002371,1.30e-07,16 | |||
|phase1_expression=0.480446541314382,0,0,0.60492842261366,0,0,1.86890112476421,1.29123323441576,2.25261955442667,3.7450324211519,3.25314139628459,2.31339261086476,4.96482116800497,3.75907730401689,0,2.42970320867791,2.79824751251259,5.0473946457318,3.56497527374921,2.54633791078818,0,0,3.39559725880616,2.3998863419011,2.2940928106717,0,0.86152399231815,0.215471232685889,0.570070258369122,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0.837063261473815,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0,0,0,0,0,0,0,0,0,2.01339127269284,2.17608642603403,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36307147999731,1.5870027622425,1.44932244350839,2.58127163094416,0,0,0,0,0,0,1.55871602761721,0.70667914902068,0.563373679106722,0,0,0,1.29894624606728,1.52015919285059,2.52762222507392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03165135757089,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,1.99787358036658,1.34570784914214,1.84673078000486,0,0,0.183151624267265,0,0,0,0,0,1.54667864109319,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr9:123840094..123840116,+ | |||
}} |
Revision as of 17:18, 14 September 2013
Short description: | p@chr9:123840094..123840116, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:123840094..123840116, + |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.74e-24 | 46 |
hemolymphoid system | 9.08e-10 | 48 |
immune system | 9.08e-10 | 48 |
trachea | 5.12e-08 | 3 |
respiratory airway | 5.12e-08 | 3 |
tracheobronchial tree | 5.12e-08 | 3 |
lower respiratory tract | 5.12e-08 | 3 |
blastocyst | 6.07e-08 | 3 |
blastula | 6.07e-08 | 3 |
cleaving embryo | 6.07e-08 | 3 |
hematopoietic system | 9.12e-08 | 45 |
blood island | 9.12e-08 | 45 |
bone marrow | 1.30e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.