FFCP PHASE1:Mm9::chr14:80406025..80406057,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:80406025..80406057,+|id=chr14:80406025..80406057,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,1.49e-13,3;CL:0002563,1.77e-11,9;CL:0002251,1.77e-11,9;CL:0002076,8.97e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.69e-12,3;DOID:4045,4.69e-12,3|ontology_enrichment_uberon=UBERON:0000344!1.23e-14!15;UBERON:0000160!2.86e-14!43;UBERON:0005409!5.20e-14!59;UBERON:0004923!2.01e-12!24;UBERON:0001242!7.53e-12!13;UBERON:0000060!7.53e-12!13;UBERON:0001262!7.53e-12!13;UBERON:0004786!7.53e-12!13;UBERON:0001007!6.45e-11!128;UBERON:0001555!6.45e-11!128;UBERON:0007026!6.45e-11!128;UBERON:0004119!1.40e-10!130;UBERON:0000925!1.40e-10!130;UBERON:0006595!1.40e-10!130;UBERON:0004921!1.72e-09!126;UBERON:0004185!1.72e-09!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.92e-25,15;UBERON:0000160,1.09e-19,31;UBERON:0001242,3.69e-19,13;UBERON:0001262,3.69e-19,13;UBERON:0004786,3.69e-19,13;UBERON:0004923,2.44e-18,24;UBERON:0002108,3.68e-16,4;UBERON:0005409,3.72e-14,47;UBERON:0000331,1.48e-12,3;UBERON:0002116,1.48e-12,3;UBERON:0001204,1.48e-12,3;UBERON:0001168,1.48e-12,3;UBERON:0003350,1.77e-11,9;UBERON:0004808,1.77e-11,9;UBERON:0001277,1.77e-11,9;UBERON:0000485,2.42e-09,11;UBERON:0001962,1.13e-08,2;UBERON:0001961,1.13e-08,2;UBERON:0001744,1.13e-08,2;UBERON:0001007,8.18e-07,116;UBERON:0001555,8.18e-07,116;UBERON:0007026,8.18e-07,116|phase1_expression=0,0,0,0.30246421130683,0,1.6787927191189,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.43993180514066,2.52350209173887,0.57423196411502,0,0.430942465371778,3.04037471130198,2.52030129759931,1.55211357458713,0,0,0,17.6199488048278,16.6234645358492,12.8626694445293,1.67412652294763,1.5626706890476,2.09409497589519,1.76469446409304,1.36609096991689,2.42755176515577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0.190225626112559,2.37264530772256,0.164698954724011,0.754005626400808,0.198956472041151,0.779856348476481,3.59527763461689,1.51296634912286,1.59313018603494,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0.608580364165509,0.241177159752417,0.25462585178142,0.287696137450811,0.972811360650212,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0.170870880797853,0.412773735926445,1.11116716421827,0,0,0,0,0,0.138199973804424,0,0,0,0.216010681643603,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr14:80406025..80406057,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:80406025..80406057,+ | |||
|id=chr14:80406025..80406057,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.49e-13,3;CL:0002563,1.77e-11,9;CL:0002251,1.77e-11,9;CL:0002076,8.97e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.69e-12,3;DOID:4045,4.69e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.23e-14!15;UBERON:0000160!2.86e-14!43;UBERON:0005409!5.20e-14!59;UBERON:0004923!2.01e-12!24;UBERON:0001242!7.53e-12!13;UBERON:0000060!7.53e-12!13;UBERON:0001262!7.53e-12!13;UBERON:0004786!7.53e-12!13;UBERON:0001007!6.45e-11!128;UBERON:0001555!6.45e-11!128;UBERON:0007026!6.45e-11!128;UBERON:0004119!1.40e-10!130;UBERON:0000925!1.40e-10!130;UBERON:0006595!1.40e-10!130;UBERON:0004921!1.72e-09!126;UBERON:0004185!1.72e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.92e-25,15;UBERON:0000160,1.09e-19,31;UBERON:0001242,3.69e-19,13;UBERON:0001262,3.69e-19,13;UBERON:0004786,3.69e-19,13;UBERON:0004923,2.44e-18,24;UBERON:0002108,3.68e-16,4;UBERON:0005409,3.72e-14,47;UBERON:0000331,1.48e-12,3;UBERON:0002116,1.48e-12,3;UBERON:0001204,1.48e-12,3;UBERON:0001168,1.48e-12,3;UBERON:0003350,1.77e-11,9;UBERON:0004808,1.77e-11,9;UBERON:0001277,1.77e-11,9;UBERON:0000485,2.42e-09,11;UBERON:0001962,1.13e-08,2;UBERON:0001961,1.13e-08,2;UBERON:0001744,1.13e-08,2;UBERON:0001007,8.18e-07,116;UBERON:0001555,8.18e-07,116;UBERON:0007026,8.18e-07,116 | |||
|phase1_expression=0,0,0,0.30246421130683,0,1.6787927191189,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.43993180514066,2.52350209173887,0.57423196411502,0,0.430942465371778,3.04037471130198,2.52030129759931,1.55211357458713,0,0,0,17.6199488048278,16.6234645358492,12.8626694445293,1.67412652294763,1.5626706890476,2.09409497589519,1.76469446409304,1.36609096991689,2.42755176515577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0.190225626112559,2.37264530772256,0.164698954724011,0.754005626400808,0.198956472041151,0.779856348476481,3.59527763461689,1.51296634912286,1.59313018603494,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0.608580364165509,0.241177159752417,0.25462585178142,0.287696137450811,0.972811360650212,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0.170870880797853,0.412773735926445,1.11116716421827,0,0,0,0,0,0.138199973804424,0,0,0,0.216010681643603,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr14:80406025..80406057,+ | |||
}} |
Revision as of 03:11, 13 September 2013
Short description: | p@chr14:80406025..80406057, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:80406025..80406057, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.49e-13 | 3 |
intestinal epithelial cell | 1.77e-11 | 9 |
epithelial cell of alimentary canal | 1.77e-11 | 9 |
endo-epithelial cell | 8.97e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.92e-25 | 15 |
intestine | 1.09e-19 | 31 |
intestinal mucosa | 3.69e-19 | 13 |
wall of intestine | 3.69e-19 | 13 |
gastrointestinal system mucosa | 3.69e-19 | 13 |
organ component layer | 2.44e-18 | 24 |
small intestine | 3.68e-16 | 4 |
gastrointestinal system | 3.72e-14 | 47 |
ileal mucosa | 1.48e-12 | 3 |
ileum | 1.48e-12 | 3 |
mucosa of small intestine | 1.48e-12 | 3 |
wall of small intestine | 1.48e-12 | 3 |
epithelium of mucosa | 1.77e-11 | 9 |
gastrointestinal system epithelium | 1.77e-11 | 9 |
intestinal epithelium | 1.77e-11 | 9 |
simple columnar epithelium | 2.42e-09 | 11 |
gut-associated lymphoid tissue | 1.13e-08 | 2 |
mucosa-associated lymphoid tissue | 1.13e-08 | 2 |
lymphoid tissue | 1.13e-08 | 2 |
digestive system | 8.18e-07 | 116 |
digestive tract | 8.18e-07 | 116 |
primitive gut | 8.18e-07 | 116 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.69e-12 | 3 |
muscle cancer | 4.69e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.