FFCP PHASE1:Mm9::chr8:18991046..18991061,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=353320|HGNC=|MCL_coexpression_id=9|UniProt=Q7TMD2|association_with_transcript=0bp_to_ENSMUST00000066282,NM_181683,uc009kzz.1_5end|description=CAGE_peak_1_at_Defb37_5end|id=chr8:18991046..18991061,-|ontology_enrichment_celltype=CL:0002250!5.16e-07!3|ontology_enrichment_celltype_v019_2=CL:0002250,5.52e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.11e-16!43;UBERON:0005409!3.30e-13!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.50e-23,31;UBERON:0005409,3.21e-17,47;UBERON:0001155,3.79e-10,2;UBERON:0000059,3.79e-10,2;UBERON:0001301,9.79e-08,3;UBERON:0006555,9.79e-08,3;UBERON:0005103,9.79e-08,3;UBERON:0000083,9.79e-08,3;UBERON:0009201,9.79e-08,3;UBERON:0004819,9.79e-08,3;UBERON:0006553,9.79e-08,3;UBERON:0003074,9.79e-08,3;UBERON:0003060,9.79e-08,3|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0.22940928106717,0,0,0,1.33016393619462,0,0.221730510655305,0,0,0,1.44425809875637,0.831173226792462,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,29.1112311227618,242.613848096328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.605050573870028,0.889512175379481,0.760902504450237,0.474529061544512,1.81168850196412,3.77002813200404,4.37704238490532,2.33956904542944,1.79763881730844,2.80979464837102,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,1.68499465279331,0,0,0,0,0,0,0,0,0.2604087696879,0,0.483168241652012,12.0972602628303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p1@Defb37}} | ||
|EntrezGene=353320 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=Q7TMD2 | |||
|association_with_transcript=0bp_to_ENSMUST00000066282,NM_181683,uc009kzz.1_5end | |||
|description=CAGE_peak_1_at_Defb37_5end | |||
|id=chr8:18991046..18991061,- | |||
|ontology_enrichment_celltype=CL:0002250!5.16e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,5.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.11e-16!43;UBERON:0005409!3.30e-13!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.50e-23,31;UBERON:0005409,3.21e-17,47;UBERON:0001155,3.79e-10,2;UBERON:0000059,3.79e-10,2;UBERON:0001301,9.79e-08,3;UBERON:0006555,9.79e-08,3;UBERON:0005103,9.79e-08,3;UBERON:0000083,9.79e-08,3;UBERON:0009201,9.79e-08,3;UBERON:0004819,9.79e-08,3;UBERON:0006553,9.79e-08,3;UBERON:0003074,9.79e-08,3;UBERON:0003060,9.79e-08,3 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0.22940928106717,0,0,0,1.33016393619462,0,0.221730510655305,0,0,0,1.44425809875637,0.831173226792462,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,29.1112311227618,242.613848096328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.605050573870028,0.889512175379481,0.760902504450237,0.474529061544512,1.81168850196412,3.77002813200404,4.37704238490532,2.33956904542944,1.79763881730844,2.80979464837102,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,1.68499465279331,0,0,0,0,0,0,0,0,0.2604087696879,0,0.483168241652012,12.0972602628303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p1@Defb37 | |||
}} |
Revision as of 15:19, 14 September 2013
Short description: | p1@Defb37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Defb37_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000066282, NM_181683, uc009kzz.1_5end |
EntrezGene: | Defb37 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 5.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.50e-23 | 31 |
gastrointestinal system | 3.21e-17 | 47 |
colon | 3.79e-10 | 2 |
large intestine | 3.79e-10 | 2 |
epididymis | 9.79e-08 | 3 |
excretory tube | 9.79e-08 | 3 |
mesonephric epithelium | 9.79e-08 | 3 |
mesonephric tubule | 9.79e-08 | 3 |
nephric duct | 9.79e-08 | 3 |
kidney epithelium | 9.79e-08 | 3 |
renal duct | 9.79e-08 | 3 |
mesonephric duct | 9.79e-08 | 3 |
pronephric duct | 9.79e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.