FFCP PHASE1:Mm9::chr10:127480499..127480510,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=78|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127480499..127480510,+|id=chr10:127480499..127480510,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.91e-10!18;UBERON:0000948!7.91e-10!18;UBERON:0005498!7.91e-10!18;UBERON:0004140!7.91e-10!18;UBERON:0009881!7.91e-10!18;UBERON:0004141!7.91e-10!18;UBERON:0003084!7.91e-10!18;UBERON:0007005!7.91e-10!18;UBERON:0004139!7.91e-10!18;UBERON:0004291!7.91e-10!18;UBERON:0004535!1.66e-07!23;UBERON:0001009!1.66e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.11e-29,18;UBERON:0000948,1.11e-29,18;UBERON:0005498,1.11e-29,18;UBERON:0004140,1.11e-29,18;UBERON:0009881,1.11e-29,18;UBERON:0004141,1.11e-29,18;UBERON:0003084,1.11e-29,18;UBERON:0007005,1.11e-29,18;UBERON:0004139,1.11e-29,18;UBERON:0004291,1.11e-29,18;UBERON:0004535,1.55e-22,23;UBERON:0001009,1.55e-22,23;UBERON:0004872,9.61e-15,33;UBERON:0003914,1.23e-12,47;UBERON:0003103,3.02e-12,43;UBERON:0005418,6.01e-09,5;UBERON:0002472,6.01e-09,5;UBERON:0008784,6.01e-09,5;UBERON:0006058,6.01e-09,5;UBERON:0004709,6.01e-09,5;UBERON:0002529,6.01e-09,5;UBERON:0010538,6.01e-09,5;UBERON:0005420,6.01e-09,5;UBERON:0010758,6.01e-09,5;UBERON:0000978,6.01e-09,5;UBERON:0002103,6.01e-09,5;UBERON:0000376,6.01e-09,5;UBERON:0000154,6.01e-09,5;UBERON:0010709,6.01e-09,5;UBERON:0005730,6.01e-09,5;UBERON:0003081,6.16e-07,87|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,1.07940638327563,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0,0.352766121407114,0,0.247194967734374,0,0,1.94120219936891,2.20841518460394,1.45462575940567,0,0.585561594023094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.420883711772948,0.260240885925407,0,0,0.30140963567143,0.272145996605311,0.2562274405697,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0,0,0,0,0,0,0.414251545071004,3.04883877975425,2.88099298337624,1.65721314909647,3.93528463494808,4.9365476123961,6.51095045301142,3.75582761959467,2.80236821681207,3.45575684818309,5.25335885053105,2.51313309592153,2.33919979880532,2.63460138349261,2.01309628140558,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.387904974335251,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0,0.162135226775035,0.274561413188081,5.75072826109418,0.372140947668503,0.312037673114561,0.252578877947112,0,0.964887042726734,0,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0,2.01976741763498,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0.376736914009382,0.546776910884101,0,0.169978429993855,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,1.04544148007234,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0.966336483304024,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0.590758108698309,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,1.58711268530648,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.188626341386076,0.561849044819294,0.768301828858431,1.03383844120104,1.42888107384922,0.231768651889711,1.54327376370964,0,1.03039244094078,2.74295401908332,0.887379030796687,0,0.872078499793971,0.470546902076653,0.423073039458382,0.73171189149109,2.10455769150274,1.22223702461276,0.561142271657738,0.711810108745045,1.0835493061312,0.409231043169689,0.619747364743864,0.964533054905707,0.999242311751784,0,0.214871054048298,1.53030665655075,0.882365676478062,0.463735671240843|short_description=p@chr10:127480499..127480510,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=78 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:127480499..127480510,+ | |||
|id=chr10:127480499..127480510,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.91e-10!18;UBERON:0000948!7.91e-10!18;UBERON:0005498!7.91e-10!18;UBERON:0004140!7.91e-10!18;UBERON:0009881!7.91e-10!18;UBERON:0004141!7.91e-10!18;UBERON:0003084!7.91e-10!18;UBERON:0007005!7.91e-10!18;UBERON:0004139!7.91e-10!18;UBERON:0004291!7.91e-10!18;UBERON:0004535!1.66e-07!23;UBERON:0001009!1.66e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.11e-29,18;UBERON:0000948,1.11e-29,18;UBERON:0005498,1.11e-29,18;UBERON:0004140,1.11e-29,18;UBERON:0009881,1.11e-29,18;UBERON:0004141,1.11e-29,18;UBERON:0003084,1.11e-29,18;UBERON:0007005,1.11e-29,18;UBERON:0004139,1.11e-29,18;UBERON:0004291,1.11e-29,18;UBERON:0004535,1.55e-22,23;UBERON:0001009,1.55e-22,23;UBERON:0004872,9.61e-15,33;UBERON:0003914,1.23e-12,47;UBERON:0003103,3.02e-12,43;UBERON:0005418,6.01e-09,5;UBERON:0002472,6.01e-09,5;UBERON:0008784,6.01e-09,5;UBERON:0006058,6.01e-09,5;UBERON:0004709,6.01e-09,5;UBERON:0002529,6.01e-09,5;UBERON:0010538,6.01e-09,5;UBERON:0005420,6.01e-09,5;UBERON:0010758,6.01e-09,5;UBERON:0000978,6.01e-09,5;UBERON:0002103,6.01e-09,5;UBERON:0000376,6.01e-09,5;UBERON:0000154,6.01e-09,5;UBERON:0010709,6.01e-09,5;UBERON:0005730,6.01e-09,5;UBERON:0003081,6.16e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,1.07940638327563,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0,0.352766121407114,0,0.247194967734374,0,0,1.94120219936891,2.20841518460394,1.45462575940567,0,0.585561594023094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.420883711772948,0.260240885925407,0,0,0.30140963567143,0.272145996605311,0.2562274405697,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0,0,0,0,0,0,0.414251545071004,3.04883877975425,2.88099298337624,1.65721314909647,3.93528463494808,4.9365476123961,6.51095045301142,3.75582761959467,2.80236821681207,3.45575684818309,5.25335885053105,2.51313309592153,2.33919979880532,2.63460138349261,2.01309628140558,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.387904974335251,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0,0.162135226775035,0.274561413188081,5.75072826109418,0.372140947668503,0.312037673114561,0.252578877947112,0,0.964887042726734,0,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0,2.01976741763498,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0.376736914009382,0.546776910884101,0,0.169978429993855,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,1.04544148007234,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0.966336483304024,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0.590758108698309,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,1.58711268530648,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.188626341386076,0.561849044819294,0.768301828858431,1.03383844120104,1.42888107384922,0.231768651889711,1.54327376370964,0,1.03039244094078,2.74295401908332,0.887379030796687,0,0.872078499793971,0.470546902076653,0.423073039458382,0.73171189149109,2.10455769150274,1.22223702461276,0.561142271657738,0.711810108745045,1.0835493061312,0.409231043169689,0.619747364743864,0.964533054905707,0.999242311751784,0,0.214871054048298,1.53030665655075,0.882365676478062,0.463735671240843 | |||
|short_description=p@chr10:127480499..127480510,+ | |||
}} |
Revision as of 16:06, 12 September 2013
Short description: | p@chr10:127480499..127480510, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127480499..127480510, + |
Coexpression cluster: | MCL_coexpression_mm9:78 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.11e-29 | 18 |
heart | 1.11e-29 | 18 |
primitive heart tube | 1.11e-29 | 18 |
primary heart field | 1.11e-29 | 18 |
anterior lateral plate mesoderm | 1.11e-29 | 18 |
heart tube | 1.11e-29 | 18 |
heart primordium | 1.11e-29 | 18 |
cardiac mesoderm | 1.11e-29 | 18 |
cardiogenic plate | 1.11e-29 | 18 |
heart rudiment | 1.11e-29 | 18 |
cardiovascular system | 1.55e-22 | 23 |
circulatory system | 1.55e-22 | 23 |
splanchnic layer of lateral plate mesoderm | 9.61e-15 | 33 |
epithelial tube | 1.23e-12 | 47 |
compound organ | 3.02e-12 | 43 |
hindlimb bud | 6.01e-09 | 5 |
stylopod | 6.01e-09 | 5 |
lower limb segment | 6.01e-09 | 5 |
multi-limb segment region | 6.01e-09 | 5 |
pelvic appendage | 6.01e-09 | 5 |
limb segment | 6.01e-09 | 5 |
paired limb/fin segment | 6.01e-09 | 5 |
pelvic appendage bud | 6.01e-09 | 5 |
subdivision of organism along appendicular axis | 6.01e-09 | 5 |
leg | 6.01e-09 | 5 |
hindlimb | 6.01e-09 | 5 |
hindlimb stylopod | 6.01e-09 | 5 |
posterior region of body | 6.01e-09 | 5 |
pelvic complex | 6.01e-09 | 5 |
hindlimb/pelvic fin field | 6.01e-09 | 5 |
lateral plate mesoderm | 6.16e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.