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MCL coexpression mm9:78

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:127476528..127476538,+p@chr10:127476528..127476538
+
Mm9::chr10:127476649..127476662,+p@chr10:127476649..127476662
+
Mm9::chr10:127479426..127479438,+p@chr10:127479426..127479438
+
Mm9::chr10:127479889..127479903,+p@chr10:127479889..127479903
+
Mm9::chr10:127479948..127479967,+p@chr10:127479948..127479967
+
Mm9::chr10:127480174..127480184,+p@chr10:127480174..127480184
+
Mm9::chr10:127480265..127480276,+p@chr10:127480265..127480276
+
Mm9::chr10:127480499..127480510,+p@chr10:127480499..127480510
+
Mm9::chr10:32811218..32811223,+p@chr10:32811218..32811223
+
Mm9::chr10:32858998..32859018,+p@chr10:32858998..32859018
+
Mm9::chr14:35380715..35380736,-p@chr14:35380715..35380736
-
Mm9::chr15:89247090..89247094,-p@chr15:89247090..89247094
-
Mm9::chr16:96422273..96422313,+p1@Sh3bgr
Mm9::chr18:10782906..10782910,-p1@Mir133a-1
Mm9::chr18:10785476..10785480,-p1@Mir1a-2
Mm9::chr18:61123171..61123257,+p2@Camk2a
Mm9::chr1:162714235..162714239,-p@chr1:162714235..162714239
-
Mm9::chr1:66984125..66984135,-p@chr1:66984125..66984135
-
Mm9::chr2:180122767..180122770,+p@chr2:180122767..180122770
+
Mm9::chr2:180123824..180123827,+p2@Mir1a-1
Mm9::chr2:72243309..72243321,+p@chr2:72243309..72243321
+
Mm9::chr2:72243395..72243404,+p@chr2:72243395..72243404
+
Mm9::chr2:72244339..72244343,+p@chr2:72244339..72244343
+
Mm9::chr2:76542782..76542790,-p@chr2:76542782..76542790
-
Mm9::chr2:76547196..76547213,-p@chr2:76547196..76547213
-
Mm9::chr2:76547521..76547539,-p@chr2:76547521..76547539
-
Mm9::chr2:76547563..76547577,-p@chr2:76547563..76547577
-
Mm9::chr2:76547757..76547769,-p@chr2:76547757..76547769
-
Mm9::chr2:76547889..76547898,-p@chr2:76547889..76547898
-
Mm9::chr2:76547959..76547972,-p@chr2:76547959..76547972
-
Mm9::chr2:76548786..76548799,-p@chr2:76548786..76548799
-
Mm9::chr2:76549786..76549798,-p@chr2:76549786..76549798
-
Mm9::chr2:76550577..76550588,-p@chr2:76550577..76550588
-
Mm9::chr2:76550663..76550674,-p@chr2:76550663..76550674
-
Mm9::chr2:76551539..76551561,-p@chr2:76551539..76551561
-
Mm9::chr2:76551866..76551887,-p@chr2:76551866..76551887
-
Mm9::chr2:76551918..76551956,-p@chr2:76551918..76551956
-
Mm9::chr2:76553820..76553837,-p@chr2:76553820..76553837
-
Mm9::chr2:76556119..76556130,-p@chr2:76556119..76556130
-
Mm9::chr2:76556181..76556196,-p@chr2:76556181..76556196
-
Mm9::chr2:76556465..76556479,-p@chr2:76556465..76556479
-
Mm9::chr2:76557046..76557058,-p@chr2:76557046..76557058
-
Mm9::chr2:76558763..76558775,-p@chr2:76558763..76558775
-
Mm9::chr2:76561378..76561391,-p@chr2:76561378..76561391
-
Mm9::chr2:76568223..76568242,-p@chr2:76568223..76568242
-
Mm9::chr2:76572851..76572876,-p@chr2:76572851..76572876
-
Mm9::chr2:76573315..76573323,-p@chr2:76573315..76573323
-
Mm9::chr2:76574199..76574211,-p@chr2:76574199..76574211
-
Mm9::chr2:76574257..76574274,-p@chr2:76574257..76574274
-
Mm9::chr2:76574915..76574929,-p@chr2:76574915..76574929
-
Mm9::chr2:76575056..76575071,-p@chr2:76575056..76575071
-
Mm9::chr2:76575304..76575315,-p@chr2:76575304..76575315
-
Mm9::chr2:76575516..76575528,-p@chr2:76575516..76575528
-
Mm9::chr2:76577146..76577160,-p@chr2:76577146..76577160
-
Mm9::chr2:76578868..76578880,-p@chr2:76578868..76578880
-
Mm9::chr2:76580312..76580323,-p@chr2:76580312..76580323
-
Mm9::chr2:76580336..76580352,-p@chr2:76580336..76580352
-
Mm9::chr2:76580793..76580809,-p@chr2:76580793..76580809
-
Mm9::chr2:76581825..76581837,-p@chr2:76581825..76581837
-
Mm9::chr2:76581873..76581881,-p@chr2:76581873..76581881
-
Mm9::chr2:76583174..76583191,-p@chr2:76583174..76583191
-
Mm9::chr2:76583643..76583655,-p@chr2:76583643..76583655
-
Mm9::chr2:76583683..76583697,-p@chr2:76583683..76583697
-
Mm9::chr2:76584139..76584159,-p@chr2:76584139..76584159
-
Mm9::chr2:76584463..76584476,-p@chr2:76584463..76584476
-
Mm9::chr2:76585120..76585131,-p@chr2:76585120..76585131
-
Mm9::chr2:76586819..76586829,-p@chr2:76586819..76586829
-
Mm9::chr2:76587001..76587014,-p@chr2:76587001..76587014
-
Mm9::chr2:76588203..76588212,-p@chr2:76588203..76588212
-
Mm9::chr2:76588548..76588562,-p@chr2:76588548..76588562
-
Mm9::chr2:76588640..76588652,-p@chr2:76588640..76588652
-
Mm9::chr2:76590544..76590556,-p@chr2:76590544..76590556
-
Mm9::chr2:76591945..76591956,-p@chr2:76591945..76591956
-
Mm9::chr2:76592105..76592109,-p@chr2:76592105..76592109
-
Mm9::chr2:76594015..76594021,-p@chr2:76594015..76594021
-
Mm9::chr2:76598085..76598097,-p@chr2:76598085..76598097
-
Mm9::chr2:76602935..76602947,-p@chr2:76602935..76602947
-
Mm9::chr2:76604391..76604414,-p@chr2:76604391..76604414
-
Mm9::chr2:76604433..76604449,-p@chr2:76604433..76604449
-
Mm9::chr2:76607035..76607046,-p@chr2:76607035..76607046
-
Mm9::chr2:76608545..76608559,-p@chr2:76608545..76608559
-
Mm9::chr2:76608604..76608617,-p@chr2:76608604..76608617
-
Mm9::chr2:76616572..76616590,-p@chr2:76616572..76616590
-
Mm9::chr2:76622566..76622584,-p@chr2:76622566..76622584
-
Mm9::chr2:76623885..76623895,-p@chr2:76623885..76623895
-
Mm9::chr2:76624305..76624317,-p@chr2:76624305..76624317
-
Mm9::chr2:76624761..76624772,-p@chr2:76624761..76624772
-
Mm9::chr2:76625238..76625254,-p@chr2:76625238..76625254
-
Mm9::chr2:76627555..76627569,-p@chr2:76627555..76627569
-
Mm9::chr2:76628066..76628079,-p@chr2:76628066..76628079
-
Mm9::chr2:76629287..76629299,-p@chr2:76629287..76629299
-
Mm9::chr2:76629340..76629351,-p@chr2:76629340..76629351
-
Mm9::chr2:76632602..76632614,-p@chr2:76632602..76632614
-
Mm9::chr2:76634521..76634533,-p@chr2:76634521..76634533
-
Mm9::chr2:76636437..76636450,-p@chr2:76636437..76636450
-
Mm9::chr2:76636486..76636499,-p@chr2:76636486..76636499
-
Mm9::chr2:76645444..76645456,-p@chr2:76645444..76645456
-
Mm9::chr2:76647064..76647075,-p@chr2:76647064..76647075
-
Mm9::chr2:76648755..76648760,-p@chr2:76648755..76648760
-
Mm9::chr2:76649456..76649459,-p@chr2:76649456..76649459
-
Mm9::chr2:76650194..76650210,-p@chr2:76650194..76650210
-
Mm9::chr2:76652411..76652428,-p@chr2:76652411..76652428
-
Mm9::chr2:76689731..76689756,-p@chr2:76689731..76689756
-
Mm9::chr2:76689772..76689810,-p@chr2:76689772..76689810
-
Mm9::chr2:76692472..76692497,-p@chr2:76692472..76692497
-
Mm9::chr2:76694387..76694400,-p@chr2:76694387..76694400
-
Mm9::chr2:76694406..76694430,-p@chr2:76694406..76694430
-
Mm9::chr2:76701374..76701401,-p@chr2:76701374..76701401
-
Mm9::chr2:76701422..76701460,-p@chr2:76701422..76701460
-
Mm9::chr2:76701553..76701574,-p@chr2:76701553..76701574
-
Mm9::chr2:76705248..76705265,-p@chr2:76705248..76705265
-
Mm9::chr2:76705275..76705290,-p@chr2:76705275..76705290
-
Mm9::chr2:76705293..76705305,-p@chr2:76705293..76705305
-
Mm9::chr2:76706094..76706114,-p@chr2:76706094..76706114
-
Mm9::chr2:76706126..76706147,-p@chr2:76706126..76706147
-
Mm9::chr2:76706432..76706450,-p4@Ttn
Mm9::chr2:76706469..76706485,-p3@Ttn
Mm9::chr2:76706507..76706516,-p15@Ttn
Mm9::chr2:76708440..76708449,-p@chr2:76708440..76708449
-
Mm9::chr2:76708456..76708475,-p@chr2:76708456..76708475
-
Mm9::chr2:76708543..76708568,-p@chr2:76708543..76708568
-
Mm9::chr2:76710891..76710910,-p@chr2:76710891..76710910
-
Mm9::chr2:76710922..76710936,-p@chr2:76710922..76710936
-
Mm9::chr2:76719315..76719318,-p@chr2:76719315..76719318
-
Mm9::chr2:76727810..76727833,-p9@Ttn
Mm9::chr2:76728211..76728232,-p10@Ttn
Mm9::chr2:76732787..76732800,-p@chr2:76732787..76732800
-
Mm9::chr2:76776460..76776470,-p6@Ttn
Mm9::chr2:76783301..76783309,-p@chr2:76783301..76783309
-
Mm9::chr2:76783440..76783451,-p@chr2:76783440..76783451
-
Mm9::chr2:76787107..76787120,-p@chr2:76787107..76787120
-
Mm9::chr2:76806533..76806559,-p@chr2:76806533..76806559
-
Mm9::chr2:76806560..76806589,-p@chr2:76806560..76806589
-
Mm9::chr2:76807221..76807244,-p@chr2:76807221..76807244
-
Mm9::chr2:76807248..76807283,-p@chr2:76807248..76807283
-
Mm9::chr2:76807713..76807738,-p@chr2:76807713..76807738
-
Mm9::chr2:76807765..76807778,-p@chr2:76807765..76807778
-
Mm9::chr2:76807870..76807882,-p@chr2:76807870..76807882
-
Mm9::chr2:76807982..76807994,-p@chr2:76807982..76807994
-
Mm9::chr2:76813118..76813137,-p@chr2:76813118..76813137
-
Mm9::chr2:76813157..76813179,-p@chr2:76813157..76813179
-
Mm9::chr2:76815208..76815242,-p@chr2:76815208..76815242
-
Mm9::chr2:76815246..76815263,-p@chr2:76815246..76815263
-
Mm9::chr3:116510887..116510894,-p12@Agl
Mm9::chr3:32719120..32719122,+p@chr3:32719120..32719122
+
Mm9::chr3:97583185..97583189,-p@chr3:97583185..97583189
-
Mm9::chr6:125116481..125116517,-p4@Gapdh
p4@LOC100042025
p4@LOC100048117
p4@LOC100505181
Mm9::chr6:5434156..5434173,-p@chr6:5434156..5434173
-
Mm9::chr6:71212478..71212490,-p3@Smyd1
Mm9::chr7:31838865..31838881,-p@chr7:31838865..31838881
-
Mm9::chr7:52592273..52592313,+p@chr7:52592273..52592313
+
Mm9::chr7:88249825..88249828,+p@chr7:88249825..88249828
+
Mm9::chr9:66881781..66881808,-p@chr9:66881781..66881808
-
Mm9::chr9:66883849..66883893,-p@chr9:66883849..66883893
-
Mm9::chr9:66883912..66883944,-p@chr9:66883912..66883944
-
Mm9::chr9:66895635..66895730,-p@chr9:66895635..66895730
-
Mm9::chr9:79825589..79825616,-p3@Filip1


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0030017sarcomere0.0104023996055443
GO:0044449contractile fiber part0.0104023996055443
GO:0030016myofibril0.0104023996055443
GO:0043292contractile fiber0.0104023996055443
GO:0004674protein serine/threonine kinase activity0.0104023996055443
GO:0031430M band0.0104023996055443
GO:0004133glycogen debranching enzyme activity0.0104023996055443
GO:0043056forward locomotion0.0104023996055443
GO:0005200structural constituent of cytoskeleton0.0114542433645602
GO:0005516calmodulin binding0.0151282760864326
GO:0031672A band0.0151282760864326
GO:0001701in utero embryonic development0.0156671893230109
GO:0004672protein kinase activity0.0157033208341587
GO:0006468protein amino acid phosphorylation0.0166383685209199
GO:0033058directional locomotion0.0166383685209199
GO:0016773phosphotransferase activity, alcohol group as acceptor0.0175111935224429
GO:0016310phosphorylation0.0175111935224429
GO:0005862muscle thin filament tropomyosin0.0175111935224429
GO:0055003cardiac myofibril assembly0.0175111935224429
GO:0007507heart development0.0190542979056395
GO:0015629actin cytoskeleton0.0201020100293696
GO:0016740transferase activity0.0201020100293696
GO:0055013cardiac muscle cell development0.0201020100293696
GO:0005954calcium- and calmodulin-dependent protein kinase complex0.0201020100293696
GO:0006793phosphorus metabolic process0.0201020100293696
GO:0006796phosphate metabolic process0.0201020100293696
GO:0031941filamentous actin0.0214512259894864
GO:0043009chordate embryonic development0.0214512259894864
GO:0016301kinase activity0.0214512259894864
GO:0009792embryonic development ending in birth or egg hatching0.0214512259894864
GO:0035254glutamate receptor binding0.0214512259894864
GO:0007512adult heart development0.0233746424491024
GO:0045214sarcomere organization0.0251806610376127
GO:0016772transferase activity, transferring phosphorus-containing groups0.0282744609746378
GO:0030239myofibril assembly0.0305942636592916
GO:0005859muscle myosin complex0.0305942636592916
GO:0055002striated muscle cell development0.0305942636592916
GO:0004683calmodulin-dependent protein kinase activity0.0305942636592916
GO:0055001muscle cell development0.0319338180250203
GO:0016460myosin II complex0.0322924246582231
GO:0005865striated muscle thin filament0.0322924246582231
GO:0006996organelle organization and biogenesis0.0322924246582231
GO:0004709MAP kinase kinase kinase activity0.0322924246582231
GO:0016043cellular component organization and biogenesis0.0322924246582231
GO:0046928regulation of neurotransmitter secretion0.0331948016188894
GO:0000287magnesium ion binding0.033542425398795
GO:0031032actomyosin structure organization and biogenesis0.033542425398795
GO:0043283biopolymer metabolic process0.0341104962285092
GO:0048628myoblast maturation0.0355483301374609
GO:0048627myoblast development0.0361768257488923
GO:0005524ATP binding0.0361768257488923
GO:0005884actin filament0.0361768257488923
GO:0043687post-translational protein modification0.0361768257488923
GO:0032559adenyl ribonucleotide binding0.0361768257488923
GO:0000082G1/S transition of mitotic cell cycle0.0361768257488923
GO:0030554adenyl nucleotide binding0.040082649846084
GO:0044260cellular macromolecule metabolic process0.0406249937616477
GO:0051146striated muscle cell differentiation0.0407477437389256
GO:0030018Z disc0.0407477437389256
GO:0009790embryonic development0.0407477437389256
GO:0007010cytoskeleton organization and biogenesis0.0407477437389256
GO:0006073glucan metabolic process0.0407477437389256
GO:0005977glycogen metabolic process0.0407477437389256
GO:0046777protein amino acid autophosphorylation0.0419774434292199
GO:0003007heart morphogenesis0.0419774434292199
GO:0031674I band0.0419774434292199
GO:0006464protein modification process0.0419774434292199
GO:0006112energy reserve metabolic process0.0419774434292199
GO:0016540protein autoprocessing0.0419774434292199
GO:0045445myoblast differentiation0.0425529965167711
GO:0006338chromatin remodeling0.0431119552158971
GO:0043412biopolymer modification0.0445802755995821
GO:0005515protein binding0.0446004509426013
GO:0044430cytoskeletal part0.0446004509426013
GO:0051325interphase0.0446004509426013
GO:0051329interphase of mitotic cell cycle0.0446004509426013
GO:0032553ribonucleotide binding0.0459119732619108
GO:0032555purine ribonucleotide binding0.0459119732619108
GO:0043234protein complex0.0459119732619108
GO:0004702receptor signaling protein serine/threonine kinase activity0.0473396445133648
GO:0005976polysaccharide metabolic process0.0473396445133648
GO:0044264cellular polysaccharide metabolic process0.0473396445133648
GO:0017076purine nucleotide binding0.0482796740743974



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10
MA0004.10.0536479
MA0006.10.000365611
MA0007.10.467453
MA0009.10.0260629
MA0014.10
MA0017.10.644679
MA0019.10.770761
MA0024.10.0186339
MA0025.10.0967385
MA0027.11.23697
MA0028.10.0394113
MA0029.10.366431
MA0030.10.0754563
MA0031.10.156505
MA0038.11.0656
MA0040.10.283931
MA0041.10.00180253
MA0042.10.00413827
MA0043.10.723832
MA0046.10.316966
MA0048.10.00744632
MA0050.10.381705
MA0051.10.618628
MA0052.10.295104
MA0055.10.000583663
MA0056.10
MA0057.10.000540291
MA0058.10.0423036
MA0059.10.027172
MA0060.10.00252425
MA0061.10.218256
MA0063.10
MA0066.11.28471
MA0067.10.14912
MA0068.19.46779e-07
MA0069.10.12419
MA0070.10.83284
MA0071.10.930362
MA0072.10.503944
MA0073.10
MA0074.10.422499
MA0076.10.0458425
MA0077.10.242398
MA0078.11.31485
MA0081.10.201818
MA0083.10.40943
MA0084.10.948668
MA0087.10.617049
MA0088.14.6485e-06
MA0089.10
MA0090.10.530174
MA0091.10.99586
MA0092.10.531692
MA0093.10.00569121
MA0095.10
MA0098.10
MA0100.10.252025
MA0101.10.0613559
MA0103.10.72266
MA0105.10.00585193
MA0106.10.0140669
MA0107.10.412678
MA0108.20.212332
MA0109.10
MA0111.11.74096
MA0113.10.297695
MA0114.10.209096
MA0115.11.58202
MA0116.10.0539568
MA0117.10.158952
MA0119.10.061953
MA0122.10.175262
MA0124.11.26736
MA0125.10.301951
MA0130.10
MA0131.10.0260784
MA0132.10
MA0133.10
MA0135.10.216283
MA0136.10.11098
MA0139.10.00617721
MA0140.10.553566
MA0141.11.50226
MA0142.10.142348
MA0143.10.993147
MA0144.10.0740647
MA0145.10.000614843
MA0146.11.2598e-12
MA0147.10.000893655
MA0148.10.203874
MA0149.17.25302e-06
MA0062.20.000992855
MA0035.20.400525
MA0039.20
MA0138.20.165738
MA0002.21.24011
MA0137.20.0538972
MA0104.26.32398e-05
MA0047.20.251
MA0112.20.00206226
MA0065.20.00602804
MA0150.10.142766
MA0151.10
MA0152.11.67746
MA0153.10.232166
MA0154.10.00205809
MA0155.10.00106982
MA0156.10.0450696
MA0157.10.418508
MA0158.10
MA0159.10.0490491
MA0160.11.85378
MA0161.10
MA0162.10
MA0163.11.66134e-09
MA0164.10.111381
MA0080.20.0347531
MA0018.20.122457
MA0099.20.158099
MA0079.20
MA0102.20.401424
MA0258.10.21996
MA0259.10.0160518
MA0442.10
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