FFCP PHASE1:Mm9::chr3:102582249..102582265,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1238|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:102582249..102582265,-|id=chr3:102582249..102582265,-|ontology_enrichment_celltype=CL:0000197!1.69e-13!2;CL:0002491!1.69e-13!2;CL:0000098!1.69e-13!2;CL:0000710!9.86e-08!1;CL:0002077!9.86e-08!1;CL:0005014!9.86e-08!1;CL:0002315!9.86e-08!1;CL:0002490!9.86e-08!1;CL:0000006!2.05e-07!1;CL:0002374!2.05e-07!1;CL:0000202!2.05e-07!1;CL:0000199!2.05e-07!1;CL:0000855!2.05e-07!1;CL:0000589!2.05e-07!1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!5.69e-51!8;UBERON:0003296!5.69e-51!8;UBERON:0010133!5.69e-51!8;UBERON:0001894!1.13e-40!10;UBERON:0006222!1.13e-40!10;UBERON:0003465!1.69e-13!2;UBERON:0008193!1.69e-13!2;UBERON:0000032!1.69e-13!2;UBERON:0005744!1.69e-13!2;UBERON:0008001!1.69e-13!2;UBERON:0007497!1.69e-13!2;UBERON:0009955!1.69e-13!2;UBERON:0003067!1.69e-13!2;UBERON:0002546!1.69e-13!2;UBERON:0007914!1.69e-13!2;UBERON:0003457!1.69e-13!2;UBERON:0004766!1.69e-13!2;UBERON:0005253!1.69e-13!2;UBERON:0002227!1.69e-13!2;UBERON:0001846!1.69e-13!2;UBERON:0003128!1.69e-13!2;UBERON:0002241!1.69e-13!2;UBERON:0002105!1.69e-13!2;UBERON:0001678!1.69e-13!2;UBERON:0003129!1.69e-13!2;UBERON:0001694!1.69e-13!2;UBERON:0004681!1.69e-13!2;UBERON:0001839!1.69e-13!2;UBERON:0001690!1.69e-13!2;UBERON:0001844!1.69e-13!2;UBERON:0001849!1.69e-13!2;UBERON:0002499!1.69e-13!2;UBERON:0005944!1.69e-13!2;UBERON:0001855!1.69e-13!2;UBERON:0001703!1.69e-13!2;UBERON:0003069!1.69e-13!2;UBERON:0003051!1.69e-13!2;UBERON:0004288!1.69e-13!2;UBERON:0004637!1.69e-13!2;UBERON:0004761!1.69e-13!2;UBERON:0010113!1.69e-13!2;UBERON:0003089!1.69e-13!2;UBERON:0009123!1.69e-13!2;UBERON:0009617!1.69e-13!2;UBERON:0005641!1.69e-13!2;UBERON:0002780!6.61e-10!39;UBERON:0001890!6.61e-10!39;UBERON:0006240!6.61e-10!39;UBERON:0000058!7.26e-10!6;UBERON:0003080!1.22e-09!40;UBERON:0002368!1.32e-09!60;UBERON:0007811!2.16e-09!86;UBERON:0000033!3.85e-09!63;UBERON:0002530!8.92e-09!65;UBERON:0000153!1.81e-08!94;UBERON:0000949!8.32e-08!72;UBERON:0002616!1.02e-07!49;UBERON:0003056!1.02e-07!49;UBERON:0000955!1.52e-07!50;UBERON:0006238!1.52e-07!50;UBERON:0001049!3.20e-07!52;UBERON:0005068!3.20e-07!52;UBERON:0006241!3.20e-07!52;UBERON:0007135!3.20e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.66e-54,8;UBERON:0003296,1.66e-54,8;UBERON:0010133,1.66e-54,8;UBERON:0001894,8.43e-44,10;UBERON:0006222,8.43e-44,10;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002368,7.20e-08,60;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0002530,2.65e-07,65|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,0.18006109403131,0.388076051348264,0.643011105094777,5.85222771019503,6.59964625127661,18.2649412868354,10.3518082698964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:102582249..102582265,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1238 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:102582249..102582265,- | |||
|id=chr3:102582249..102582265,- | |||
|ontology_enrichment_celltype=CL:0000197!1.69e-13!2;CL:0002491!1.69e-13!2;CL:0000098!1.69e-13!2;CL:0000710!9.86e-08!1;CL:0002077!9.86e-08!1;CL:0005014!9.86e-08!1;CL:0002315!9.86e-08!1;CL:0002490!9.86e-08!1;CL:0000006!2.05e-07!1;CL:0002374!2.05e-07!1;CL:0000202!2.05e-07!1;CL:0000199!2.05e-07!1;CL:0000855!2.05e-07!1;CL:0000589!2.05e-07!1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!5.69e-51!8;UBERON:0003296!5.69e-51!8;UBERON:0010133!5.69e-51!8;UBERON:0001894!1.13e-40!10;UBERON:0006222!1.13e-40!10;UBERON:0003465!1.69e-13!2;UBERON:0008193!1.69e-13!2;UBERON:0000032!1.69e-13!2;UBERON:0005744!1.69e-13!2;UBERON:0008001!1.69e-13!2;UBERON:0007497!1.69e-13!2;UBERON:0009955!1.69e-13!2;UBERON:0003067!1.69e-13!2;UBERON:0002546!1.69e-13!2;UBERON:0007914!1.69e-13!2;UBERON:0003457!1.69e-13!2;UBERON:0004766!1.69e-13!2;UBERON:0005253!1.69e-13!2;UBERON:0002227!1.69e-13!2;UBERON:0001846!1.69e-13!2;UBERON:0003128!1.69e-13!2;UBERON:0002241!1.69e-13!2;UBERON:0002105!1.69e-13!2;UBERON:0001678!1.69e-13!2;UBERON:0003129!1.69e-13!2;UBERON:0001694!1.69e-13!2;UBERON:0004681!1.69e-13!2;UBERON:0001839!1.69e-13!2;UBERON:0001690!1.69e-13!2;UBERON:0001844!1.69e-13!2;UBERON:0001849!1.69e-13!2;UBERON:0002499!1.69e-13!2;UBERON:0005944!1.69e-13!2;UBERON:0001855!1.69e-13!2;UBERON:0001703!1.69e-13!2;UBERON:0003069!1.69e-13!2;UBERON:0003051!1.69e-13!2;UBERON:0004288!1.69e-13!2;UBERON:0004637!1.69e-13!2;UBERON:0004761!1.69e-13!2;UBERON:0010113!1.69e-13!2;UBERON:0003089!1.69e-13!2;UBERON:0009123!1.69e-13!2;UBERON:0009617!1.69e-13!2;UBERON:0005641!1.69e-13!2;UBERON:0002780!6.61e-10!39;UBERON:0001890!6.61e-10!39;UBERON:0006240!6.61e-10!39;UBERON:0000058!7.26e-10!6;UBERON:0003080!1.22e-09!40;UBERON:0002368!1.32e-09!60;UBERON:0007811!2.16e-09!86;UBERON:0000033!3.85e-09!63;UBERON:0002530!8.92e-09!65;UBERON:0000153!1.81e-08!94;UBERON:0000949!8.32e-08!72;UBERON:0002616!1.02e-07!49;UBERON:0003056!1.02e-07!49;UBERON:0000955!1.52e-07!50;UBERON:0006238!1.52e-07!50;UBERON:0001049!3.20e-07!52;UBERON:0005068!3.20e-07!52;UBERON:0006241!3.20e-07!52;UBERON:0007135!3.20e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.66e-54,8;UBERON:0003296,1.66e-54,8;UBERON:0010133,1.66e-54,8;UBERON:0001894,8.43e-44,10;UBERON:0006222,8.43e-44,10;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002368,7.20e-08,60;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0002530,2.65e-07,65 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,0.18006109403131,0.388076051348264,0.643011105094777,5.85222771019503,6.59964625127661,18.2649412868354,10.3518082698964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:102582249..102582265,- | |||
}} |
Revision as of 01:02, 14 September 2013
Short description: | p@chr3:102582249..102582265, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:102582249..102582265, - |
Coexpression cluster: | MCL_coexpression_mm9:1238 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.66e-54 | 8 |
gland of diencephalon | 1.66e-54 | 8 |
neuroendocrine gland | 1.66e-54 | 8 |
diencephalon | 8.43e-44 | 10 |
future diencephalon | 8.43e-44 | 10 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
endocrine gland | 7.20e-08 | 60 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
gland | 2.65e-07 | 65 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.