FFCP PHASE1:Mm9::chr14:56364323..56364339,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=52585|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=96bp_to_ENSMUST00000128802_5end|description=CAGE_peak_3_at_Dhrs1_5end|id=chr14:56364323..56364339,-|ontology_enrichment_celltype=CL:0002563!2.25e-07!9;CL:0002251!2.25e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.95e-11,6;CL:0000677,1.95e-11,6;CL:0000584,1.95e-11,6;CL:0000075,1.16e-09,7;CL:0002563,2.24e-09,9;CL:0002251,2.24e-09,9;CL:0000066,4.82e-08,25;CL:0000682,5.68e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.11e-14!43;UBERON:0000344!5.67e-12!15;UBERON:0005409!4.28e-11!59;UBERON:0001242!2.53e-10!13;UBERON:0000060!2.53e-10!13;UBERON:0001262!2.53e-10!13;UBERON:0004786!2.53e-10!13;UBERON:0003350!2.25e-07!9;UBERON:0004808!2.25e-07!9;UBERON:0001277!2.25e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.20e-32,31;UBERON:0005409,2.34e-20,47;UBERON:0000344,5.75e-18,15;UBERON:0001242,7.09e-15,13;UBERON:0001262,7.09e-15,13;UBERON:0004786,7.09e-15,13;UBERON:0001007,1.95e-11,116;UBERON:0001555,1.95e-11,116;UBERON:0007026,1.95e-11,116;UBERON:0004119,4.36e-11,118;UBERON:0000925,4.36e-11,118;UBERON:0006595,4.36e-11,118;UBERON:0004923,5.62e-10,24;UBERON:0004921,6.83e-10,114;UBERON:0003350,2.24e-09,9;UBERON:0004808,2.24e-09,9;UBERON:0001277,2.24e-09,9;UBERON:0000485,1.93e-07,11;UBERON:0002108,5.06e-07,4|phase1_expression=0,48.1586062542318,48.2299193752908,34.1784558776718,27.0483694171027,5.54001597309236,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,23.8388709962176,19.9586074528438,60.2943562320771,37.0455316696804,33.3980410663128,1.52018735565099,2.52030129759931,3.76941868114018,0,0,0,0.288851619751275,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.878744730937887,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,1.19840044207362,1.92109152660777,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0.131886287730194,0.0914876436024097,0,0,0,0.45839474333043,0,0,0.186399445825301,0,0.0755715601067855,0,1.72084775396277,1.3599426674155,0.539703191637817,0,1.34408066129201,2.24711072210803,0,0,0,0,0,0,0,0,0,0,5.02409070763864,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,25.2902484656505,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,83.9263708778847,38.6097827328775,0,0,0.128867461322093,4.03367049246685,6.0042071838115,14.2669219584419,37.0132668004719,28.9870160314259,21.6148279568232,32.8278178867899,18.3266241891973,25.1669434423182,22.2622191370935,26.2866480695765,0,0,0,0,0,0,0,0,0,0.123397163921801,0.889357881261447,0,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,2.7562988551756,8.23684239564244,11.5014565221884,8.55924179637558,2.80833905803104,0.505157755894224,0.896987067609561,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,6.97756391554197,0,0,0,2.10837217149998,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,30.6054878461343,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.540026704109006,0,1.52853794622324,0.134864346384821,0.661227645802687,0,0,0,1.12738587736838,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0.724752362478018,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.576226371643824,0.516919220600519,1.42888107384922,0.579421629724277,0.578727661391115,0.412085900803307,0.294397840268795,0,0.354951612318675,2.38436189947321,0.581385666529314,0.658765662907314,0.423073039458382,1.09756783723664,0.789209134313529,0.950628796921032,0,0.830445126869219,0.886540341380071,0.409231043169689,1.23949472948773,0.771626443924566,0,1.16965804222704,3.00819475667618,0,0.441182838239031,0|short_description=p3@Dhrs1}} | ||
|EntrezGene=52585 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=96bp_to_ENSMUST00000128802_5end | |||
|description=CAGE_peak_3_at_Dhrs1_5end | |||
|id=chr14:56364323..56364339,- | |||
|ontology_enrichment_celltype=CL:0002563!2.25e-07!9;CL:0002251!2.25e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.95e-11,6;CL:0000677,1.95e-11,6;CL:0000584,1.95e-11,6;CL:0000075,1.16e-09,7;CL:0002563,2.24e-09,9;CL:0002251,2.24e-09,9;CL:0000066,4.82e-08,25;CL:0000682,5.68e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.11e-14!43;UBERON:0000344!5.67e-12!15;UBERON:0005409!4.28e-11!59;UBERON:0001242!2.53e-10!13;UBERON:0000060!2.53e-10!13;UBERON:0001262!2.53e-10!13;UBERON:0004786!2.53e-10!13;UBERON:0003350!2.25e-07!9;UBERON:0004808!2.25e-07!9;UBERON:0001277!2.25e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.20e-32,31;UBERON:0005409,2.34e-20,47;UBERON:0000344,5.75e-18,15;UBERON:0001242,7.09e-15,13;UBERON:0001262,7.09e-15,13;UBERON:0004786,7.09e-15,13;UBERON:0001007,1.95e-11,116;UBERON:0001555,1.95e-11,116;UBERON:0007026,1.95e-11,116;UBERON:0004119,4.36e-11,118;UBERON:0000925,4.36e-11,118;UBERON:0006595,4.36e-11,118;UBERON:0004923,5.62e-10,24;UBERON:0004921,6.83e-10,114;UBERON:0003350,2.24e-09,9;UBERON:0004808,2.24e-09,9;UBERON:0001277,2.24e-09,9;UBERON:0000485,1.93e-07,11;UBERON:0002108,5.06e-07,4 | |||
|phase1_expression=0,48.1586062542318,48.2299193752908,34.1784558776718,27.0483694171027,5.54001597309236,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,23.8388709962176,19.9586074528438,60.2943562320771,37.0455316696804,33.3980410663128,1.52018735565099,2.52030129759931,3.76941868114018,0,0,0,0.288851619751275,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.878744730937887,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,1.19840044207362,1.92109152660777,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0.131886287730194,0.0914876436024097,0,0,0,0.45839474333043,0,0,0.186399445825301,0,0.0755715601067855,0,1.72084775396277,1.3599426674155,0.539703191637817,0,1.34408066129201,2.24711072210803,0,0,0,0,0,0,0,0,0,0,5.02409070763864,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,25.2902484656505,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,83.9263708778847,38.6097827328775,0,0,0.128867461322093,4.03367049246685,6.0042071838115,14.2669219584419,37.0132668004719,28.9870160314259,21.6148279568232,32.8278178867899,18.3266241891973,25.1669434423182,22.2622191370935,26.2866480695765,0,0,0,0,0,0,0,0,0,0.123397163921801,0.889357881261447,0,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,2.7562988551756,8.23684239564244,11.5014565221884,8.55924179637558,2.80833905803104,0.505157755894224,0.896987067609561,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,6.97756391554197,0,0,0,2.10837217149998,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,30.6054878461343,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.540026704109006,0,1.52853794622324,0.134864346384821,0.661227645802687,0,0,0,1.12738587736838,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0.724752362478018,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.576226371643824,0.516919220600519,1.42888107384922,0.579421629724277,0.578727661391115,0.412085900803307,0.294397840268795,0,0.354951612318675,2.38436189947321,0.581385666529314,0.658765662907314,0.423073039458382,1.09756783723664,0.789209134313529,0.950628796921032,0,0.830445126869219,0.886540341380071,0.409231043169689,1.23949472948773,0.771626443924566,0,1.16965804222704,3.00819475667618,0,0.441182838239031,0 | |||
|short_description=p3@Dhrs1 | |||
}} |
Revision as of 02:34, 13 September 2013
Short description: | p3@Dhrs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dhrs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 96bp_to_ENSMUST00000128802_5end |
EntrezGene: | Dhrs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.95e-11 | 6 |
gut absorptive cell | 1.95e-11 | 6 |
enterocyte | 1.95e-11 | 6 |
columnar/cuboidal epithelial cell | 1.16e-09 | 7 |
intestinal epithelial cell | 2.24e-09 | 9 |
epithelial cell of alimentary canal | 2.24e-09 | 9 |
epithelial cell | 4.82e-08 | 25 |
M cell of gut | 5.68e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.20e-32 | 31 |
gastrointestinal system | 2.34e-20 | 47 |
mucosa | 5.75e-18 | 15 |
intestinal mucosa | 7.09e-15 | 13 |
wall of intestine | 7.09e-15 | 13 |
gastrointestinal system mucosa | 7.09e-15 | 13 |
digestive system | 1.95e-11 | 116 |
digestive tract | 1.95e-11 | 116 |
primitive gut | 1.95e-11 | 116 |
endoderm-derived structure | 4.36e-11 | 118 |
endoderm | 4.36e-11 | 118 |
presumptive endoderm | 4.36e-11 | 118 |
organ component layer | 5.62e-10 | 24 |
subdivision of digestive tract | 6.83e-10 | 114 |
epithelium of mucosa | 2.24e-09 | 9 |
gastrointestinal system epithelium | 2.24e-09 | 9 |
intestinal epithelium | 2.24e-09 | 9 |
simple columnar epithelium | 1.93e-07 | 11 |
small intestine | 5.06e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.