FFCP PHASE1:Mm9::chr14:62912065..62912077,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=239133|HGNC=|MCL_coexpression_id=22|UniProt=Q8CHZ8|association_with_transcript=-249bp_to_NM_173419,uc007ugk.2,uc011zng.1_5end|description=CAGE_peak_3_at_Dleu7_5end|id=chr14:62912065..62912077,-|ontology_enrichment_celltype=CL:0000117!1.03e-18!23;CL:0000337!1.03e-18!23;CL:0000540!8.17e-18!33;CL:0000047!8.17e-18!33;CL:0000031!8.17e-18!33;CL:0000404!8.17e-18!33;CL:0000393!4.03e-13!39;CL:0000211!4.03e-13!39;CL:0002319!8.59e-11!43;CL:0000221!2.76e-10!44;CL:0000133!2.76e-10!44;CL:0000055!9.68e-08!50;CL:0002609!7.60e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-52,23;CL:0000337,1.15e-52,23;CL:0000540,8.40e-36,33;CL:0000047,8.40e-36,33;CL:0000031,8.40e-36,33;CL:0000404,8.40e-36,33;CL:0000393,7.95e-30,39;CL:0000211,7.95e-30,39;CL:0002319,9.14e-27,43;CL:0000221,4.36e-26,44;CL:0000133,4.36e-26,44;CL:0002609,1.72e-24,6;CL:0002321,3.15e-15,70;CL:0002608,1.49e-13,3;CL:0002612,1.35e-12,3;CL:0000120,2.53e-12,3;CL:0002613,4.69e-12,3;CL:0000723,5.71e-11,91;CL:0000048,5.71e-11,91;CL:0000034,4.34e-10,97;CL:0002611,1.23e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.94e-12!34;UBERON:0001017!1.71e-11!73;UBERON:0005743!1.71e-11!73;UBERON:0000073!9.40e-11!75;UBERON:0001016!9.40e-11!75;UBERON:0007811!1.46e-08!86;UBERON:0000153!1.54e-08!94;UBERON:0002791!1.60e-08!29;UBERON:0003528!1.60e-08!29;UBERON:0001893!1.60e-08!29;UBERON:0001049!3.15e-08!52;UBERON:0005068!3.15e-08!52;UBERON:0006241!3.15e-08!52;UBERON:0007135!3.15e-08!52;UBERON:0000955!1.93e-07!50;UBERON:0006238!1.93e-07!50;UBERON:0002780!4.00e-07!39;UBERON:0001890!4.00e-07!39;UBERON:0006240!4.00e-07!39;UBERON:0002616!6.11e-07!49;UBERON:0002346!6.39e-07!71;UBERON:0003075!6.39e-07!71;UBERON:0007284!6.39e-07!71;UBERON:0003080!9.76e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.27e-38,34;UBERON:0000073,8.93e-26,54;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0001049,3.69e-24,52;UBERON:0005068,3.69e-24,52;UBERON:0006241,3.69e-24,52;UBERON:0007135,3.69e-24,52;UBERON:0003528,3.87e-24,29;UBERON:0002791,3.87e-24,29;UBERON:0001893,3.87e-24,29;UBERON:0001948,1.41e-19,5;UBERON:0002315,1.41e-19,5;UBERON:0002346,5.06e-19,64;UBERON:0003075,5.06e-19,64;UBERON:0007284,5.06e-19,64;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0002780,2.61e-17,39;UBERON:0001890,2.61e-17,39;UBERON:0006240,2.61e-17,39;UBERON:0000956,2.96e-17,21;UBERON:0001869,2.96e-17,21;UBERON:0000203,2.96e-17,21;UBERON:0003080,8.18e-17,40;UBERON:0002240,2.72e-16,6;UBERON:0005174,2.72e-16,6;UBERON:0001137,2.72e-16,6;UBERON:0010371,2.84e-16,73;UBERON:0002616,2.72e-14,46;UBERON:0000955,6.20e-14,47;UBERON:0006238,6.20e-14,47;UBERON:0003056,2.92e-13,49;UBERON:0000369,1.10e-12,5;UBERON:0002435,1.10e-12,5;UBERON:0000204,1.10e-12,5;UBERON:0010082,1.10e-12,5;UBERON:0002257,1.35e-12,3;UBERON:0010314,3.18e-12,92;UBERON:0002619,1.34e-10,17;UBERON:0001954,1.34e-09,7;UBERON:0003022,1.34e-09,7;UBERON:0002421,1.34e-09,7;UBERON:0000349,1.34e-09,7;UBERON:0002600,1.34e-09,7;UBERON:0000025,3.28e-09,114;UBERON:0002256,1.23e-08,2;UBERON:0004111,2.21e-08,122;UBERON:0003076,4.81e-08,12;UBERON:0003057,4.81e-08,12;UBERON:0002420,5.64e-08,8;UBERON:0007245,5.64e-08,8;UBERON:0010009,5.64e-08,8;UBERON:0010011,5.64e-08,8;UBERON:0000454,5.64e-08,8;UBERON:0011216,3.78e-07,194|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.68487187290202,0.717949430958028,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,1.55534418462716,2.97013064329719,2.10324961351382,1.14260393761521,2.42955395046775,6.00204916153275,5.46319184803947,4.5960939330501,1.10115880999389,0.127687338085188,0.768032666281217,1.84640802822271,1.55528994124096,1.56274011167028,0.279182999001381,0.56276261003168,0.61119299110724,2.65165726926301,1.99320353118744,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,2.63874139437015,0.521472960576829,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0,0,0,0,0,0.30140963567143,0,0,0.187403449119458,0,0,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,1.02904612379284,0,0.264450566663544,0.853153002140936,0,0,0,0,0,0,0,0.754005626400808,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0.569003702859245,0.114248512609729,0,0.407302655690628,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0.566153061577665,0.404810701674894,0,0.790575555893047,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0.39061315453185,0.419437377702843,0.241584120826006,0,0.632022241256357,0,0.410843828659309,0.389762468933385,0.358053391334963,0.993406773906324,0.120195449519969,0.295379054349154,0.706765149637033,0.457240839929999,0.705783295957884,0.292373642219257,0.288635524920988,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.84130094602871,0,1.20297227640581,0.685082519770642,0,0,0,0.453142408984205,0,0.207574695168353,0,0.170733605754134,0,0.628839487883947,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.726732083161643,0.0941093804153306,0.592302255241736,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.309873682371932,0,0.749431733813838,0.701794825336225,0,0,0,0|short_description=p3@Dleu7}} | ||
|EntrezGene=239133 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q8CHZ8 | |||
|association_with_transcript=-249bp_to_NM_173419,uc007ugk.2,uc011zng.1_5end | |||
|description=CAGE_peak_3_at_Dleu7_5end | |||
|id=chr14:62912065..62912077,- | |||
|ontology_enrichment_celltype=CL:0000117!1.03e-18!23;CL:0000337!1.03e-18!23;CL:0000540!8.17e-18!33;CL:0000047!8.17e-18!33;CL:0000031!8.17e-18!33;CL:0000404!8.17e-18!33;CL:0000393!4.03e-13!39;CL:0000211!4.03e-13!39;CL:0002319!8.59e-11!43;CL:0000221!2.76e-10!44;CL:0000133!2.76e-10!44;CL:0000055!9.68e-08!50;CL:0002609!7.60e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-52,23;CL:0000337,1.15e-52,23;CL:0000540,8.40e-36,33;CL:0000047,8.40e-36,33;CL:0000031,8.40e-36,33;CL:0000404,8.40e-36,33;CL:0000393,7.95e-30,39;CL:0000211,7.95e-30,39;CL:0002319,9.14e-27,43;CL:0000221,4.36e-26,44;CL:0000133,4.36e-26,44;CL:0002609,1.72e-24,6;CL:0002321,3.15e-15,70;CL:0002608,1.49e-13,3;CL:0002612,1.35e-12,3;CL:0000120,2.53e-12,3;CL:0002613,4.69e-12,3;CL:0000723,5.71e-11,91;CL:0000048,5.71e-11,91;CL:0000034,4.34e-10,97;CL:0002611,1.23e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.94e-12!34;UBERON:0001017!1.71e-11!73;UBERON:0005743!1.71e-11!73;UBERON:0000073!9.40e-11!75;UBERON:0001016!9.40e-11!75;UBERON:0007811!1.46e-08!86;UBERON:0000153!1.54e-08!94;UBERON:0002791!1.60e-08!29;UBERON:0003528!1.60e-08!29;UBERON:0001893!1.60e-08!29;UBERON:0001049!3.15e-08!52;UBERON:0005068!3.15e-08!52;UBERON:0006241!3.15e-08!52;UBERON:0007135!3.15e-08!52;UBERON:0000955!1.93e-07!50;UBERON:0006238!1.93e-07!50;UBERON:0002780!4.00e-07!39;UBERON:0001890!4.00e-07!39;UBERON:0006240!4.00e-07!39;UBERON:0002616!6.11e-07!49;UBERON:0002346!6.39e-07!71;UBERON:0003075!6.39e-07!71;UBERON:0007284!6.39e-07!71;UBERON:0003080!9.76e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.27e-38,34;UBERON:0000073,8.93e-26,54;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0001049,3.69e-24,52;UBERON:0005068,3.69e-24,52;UBERON:0006241,3.69e-24,52;UBERON:0007135,3.69e-24,52;UBERON:0003528,3.87e-24,29;UBERON:0002791,3.87e-24,29;UBERON:0001893,3.87e-24,29;UBERON:0001948,1.41e-19,5;UBERON:0002315,1.41e-19,5;UBERON:0002346,5.06e-19,64;UBERON:0003075,5.06e-19,64;UBERON:0007284,5.06e-19,64;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0002780,2.61e-17,39;UBERON:0001890,2.61e-17,39;UBERON:0006240,2.61e-17,39;UBERON:0000956,2.96e-17,21;UBERON:0001869,2.96e-17,21;UBERON:0000203,2.96e-17,21;UBERON:0003080,8.18e-17,40;UBERON:0002240,2.72e-16,6;UBERON:0005174,2.72e-16,6;UBERON:0001137,2.72e-16,6;UBERON:0010371,2.84e-16,73;UBERON:0002616,2.72e-14,46;UBERON:0000955,6.20e-14,47;UBERON:0006238,6.20e-14,47;UBERON:0003056,2.92e-13,49;UBERON:0000369,1.10e-12,5;UBERON:0002435,1.10e-12,5;UBERON:0000204,1.10e-12,5;UBERON:0010082,1.10e-12,5;UBERON:0002257,1.35e-12,3;UBERON:0010314,3.18e-12,92;UBERON:0002619,1.34e-10,17;UBERON:0001954,1.34e-09,7;UBERON:0003022,1.34e-09,7;UBERON:0002421,1.34e-09,7;UBERON:0000349,1.34e-09,7;UBERON:0002600,1.34e-09,7;UBERON:0000025,3.28e-09,114;UBERON:0002256,1.23e-08,2;UBERON:0004111,2.21e-08,122;UBERON:0003076,4.81e-08,12;UBERON:0003057,4.81e-08,12;UBERON:0002420,5.64e-08,8;UBERON:0007245,5.64e-08,8;UBERON:0010009,5.64e-08,8;UBERON:0010011,5.64e-08,8;UBERON:0000454,5.64e-08,8;UBERON:0011216,3.78e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.68487187290202,0.717949430958028,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,1.55534418462716,2.97013064329719,2.10324961351382,1.14260393761521,2.42955395046775,6.00204916153275,5.46319184803947,4.5960939330501,1.10115880999389,0.127687338085188,0.768032666281217,1.84640802822271,1.55528994124096,1.56274011167028,0.279182999001381,0.56276261003168,0.61119299110724,2.65165726926301,1.99320353118744,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,2.63874139437015,0.521472960576829,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0,0,0,0,0,0.30140963567143,0,0,0.187403449119458,0,0,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,1.02904612379284,0,0.264450566663544,0.853153002140936,0,0,0,0,0,0,0,0.754005626400808,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0.569003702859245,0.114248512609729,0,0.407302655690628,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0.566153061577665,0.404810701674894,0,0.790575555893047,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0.39061315453185,0.419437377702843,0.241584120826006,0,0.632022241256357,0,0.410843828659309,0.389762468933385,0.358053391334963,0.993406773906324,0.120195449519969,0.295379054349154,0.706765149637033,0.457240839929999,0.705783295957884,0.292373642219257,0.288635524920988,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.84130094602871,0,1.20297227640581,0.685082519770642,0,0,0,0.453142408984205,0,0.207574695168353,0,0.170733605754134,0,0.628839487883947,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.726732083161643,0.0941093804153306,0.592302255241736,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.309873682371932,0,0.749431733813838,0.701794825336225,0,0,0,0 | |||
|short_description=p3@Dleu7 | |||
}} |
Revision as of 02:42, 13 September 2013
Short description: | p3@Dleu7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dleu7_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -249bp_to_NM_173419, uc007ugk.2, uc011zng.1_5end |
EntrezGene: | Dleu7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-52 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-52 | 23 |
neuron | 8.40e-36 | 33 |
neuronal stem cell | 8.40e-36 | 33 |
neuroblast | 8.40e-36 | 33 |
electrically signaling cell | 8.40e-36 | 33 |
electrically responsive cell | 7.95e-30 | 39 |
electrically active cell | 7.95e-30 | 39 |
neural cell | 9.14e-27 | 43 |
ectodermal cell | 4.36e-26 | 44 |
neurectodermal cell | 4.36e-26 | 44 |
neuron of cerebral cortex | 1.72e-24 | 6 |
embryonic cell | 3.15e-15 | 70 |
hippocampal neuron | 1.49e-13 | 3 |
neuron of the ventral spinal cord | 1.35e-12 | 3 |
granule cell | 2.53e-12 | 3 |
striatum neuron | 4.69e-12 | 3 |
somatic stem cell | 5.71e-11 | 91 |
multi fate stem cell | 5.71e-11 | 91 |
stem cell | 4.34e-10 | 97 |
neuron of the dorsal spinal cord | 1.23e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.