FFCP PHASE1:Mm9::chr7:25763334..25763361,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:25763334..25763361,-|id=chr7:25763334..25763361,-|ontology_enrichment_celltype=CL:0000117!5.22e-19!23;CL:0000337!5.22e-19!23;CL:0000540!4.32e-11!33;CL:0000047!4.32e-11!33;CL:0000031!4.32e-11!33;CL:0000404!4.32e-11!33;CL:0000393!2.23e-08!39;CL:0000211!2.23e-08!39;CL:0000221!2.08e-07!44;CL:0000133!2.08e-07!44;CL:0002319!5.03e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,9.97e-13,23;CL:0000337,9.97e-13,23;CL:0002610,1.28e-08,3;CL:0000540,4.21e-08,33;CL:0000047,4.21e-08,33;CL:0000031,4.21e-08,33;CL:0000404,4.21e-08,33;CL:0002614,6.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.32e-35!71;UBERON:0003075!5.32e-35!71;UBERON:0007284!5.32e-35!71;UBERON:0001049!4.51e-31!52;UBERON:0005068!4.51e-31!52;UBERON:0006241!4.51e-31!52;UBERON:0007135!4.51e-31!52;UBERON:0000033!3.62e-30!63;UBERON:0000955!1.60e-29!50;UBERON:0006238!1.60e-29!50;UBERON:0002020!2.96e-29!34;UBERON:0002616!2.80e-28!49;UBERON:0004121!5.74e-28!102;UBERON:0000924!5.74e-28!102;UBERON:0006601!5.74e-28!102;UBERON:0001017!1.08e-26!73;UBERON:0005743!1.08e-26!73;UBERON:0000073!1.50e-25!75;UBERON:0001016!1.50e-25!75;UBERON:0003056!2.14e-24!49;UBERON:0002791!6.35e-24!29;UBERON:0003528!6.35e-24!29;UBERON:0001893!6.35e-24!29;UBERON:0003080!3.49e-22!40;UBERON:0002780!3.81e-21!39;UBERON:0001890!3.81e-21!39;UBERON:0006240!3.81e-21!39;UBERON:0007811!1.03e-20!86;UBERON:0000153!1.31e-17!94;UBERON:0000956!3.05e-16!21;UBERON:0001869!3.05e-16!21;UBERON:0000203!3.05e-16!21;UBERON:0002619!2.04e-13!17;UBERON:0002021!1.20e-12!10;UBERON:0000411!1.20e-12!10;UBERON:0001950!1.20e-12!10;UBERON:0003076!3.16e-09!12;UBERON:0003057!3.16e-09!12;UBERON:0002420!7.51e-09!8;UBERON:0007245!7.51e-09!8;UBERON:0010009!7.51e-09!8;UBERON:0010011!7.51e-09!8;UBERON:0000454!7.51e-09!8;UBERON:0000025!1.28e-08!114;UBERON:0004111!1.00e-07!122;UBERON:0002298!1.01e-07!6;UBERON:0002240!1.90e-07!6;UBERON:0005174!1.90e-07!6;UBERON:0001137!1.90e-07!6;UBERON:0000475!3.76e-07!200;UBERON:0000064!5.55e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.95e-43,54;UBERON:0001049,1.30e-38,52;UBERON:0005068,1.30e-38,52;UBERON:0006241,1.30e-38,52;UBERON:0007135,1.30e-38,52;UBERON:0001017,1.00e-34,73;UBERON:0001016,1.31e-33,75;UBERON:0002020,6.59e-33,34;UBERON:0002346,2.83e-32,64;UBERON:0003075,2.83e-32,64;UBERON:0007284,2.83e-32,64;UBERON:0000955,3.80e-32,47;UBERON:0006238,3.80e-32,47;UBERON:0002616,4.51e-30,46;UBERON:0010371,1.88e-27,73;UBERON:0004121,1.00e-26,95;UBERON:0000924,1.00e-26,95;UBERON:0006601,1.00e-26,95;UBERON:0003528,3.64e-26,29;UBERON:0002791,3.64e-26,29;UBERON:0001893,3.64e-26,29;UBERON:0003080,2.46e-24,40;UBERON:0002021,4.46e-24,10;UBERON:0000411,4.46e-24,10;UBERON:0001950,4.46e-24,10;UBERON:0002780,1.33e-22,39;UBERON:0001890,1.33e-22,39;UBERON:0006240,1.33e-22,39;UBERON:0003056,8.29e-21,49;UBERON:0010314,2.32e-20,92;UBERON:0002619,7.28e-19,17;UBERON:0000956,2.10e-17,21;UBERON:0001869,2.10e-17,21;UBERON:0000203,2.10e-17,21;UBERON:0003076,6.40e-15,12;UBERON:0003057,6.40e-15,12;UBERON:0000025,6.27e-14,114;UBERON:0004111,1.44e-12,122;UBERON:0002950,5.45e-10,4;UBERON:0001891,5.45e-10,4;UBERON:0009616,5.45e-10,4;UBERON:0010286,5.45e-10,4;UBERON:0002420,6.31e-10,8;UBERON:0007245,6.31e-10,8;UBERON:0010009,6.31e-10,8;UBERON:0010011,6.31e-10,8;UBERON:0000454,6.31e-10,8;UBERON:0002240,7.64e-10,6;UBERON:0005174,7.64e-10,6;UBERON:0001137,7.64e-10,6;UBERON:0004684,1.28e-08,3;UBERON:0002275,1.28e-08,3;UBERON:0011216,1.60e-08,194;UBERON:0001948,6.17e-08,5;UBERON:0002315,6.17e-08,5;UBERON:0002038,6.88e-08,3;UBERON:0009663,6.88e-08,3;UBERON:0009661,6.88e-08,3;UBERON:0000125,6.88e-08,3;UBERON:0002308,6.88e-08,3;UBERON:0000483,1.74e-07,174;UBERON:0000119,2.53e-07,176;UBERON:0004733,9.22e-07,6;UBERON:0004732,9.22e-07,6;UBERON:0002028,9.22e-07,6;UBERON:0007277,9.22e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.630974884054146,1.42825492201902,2.20868540951614,0.122490799214954,0.0958454710182364,1.83843757322004,6.60695285996332,6.00130489000382,7.0659005297872,0.527545150920775,0.548925861614458,1.04182674111352,3.35019598801657,1.68828783009504,7.02871939773326,7.95497180778903,5.26775218956681,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0.753613202763113,0.470354828542819,0.125666591329675,0,0,0,0,0.220841518460394,0,0,2.34224637609238,29.1130922470703,0,0,0,0,3.14560342750128,3.66000482254901,1.38219787324151,2.78118912307642,2.04572365864264,1.24672826735736,2.43361894601636,0,0,0,0.631325567659422,0.130120442962704,0,0,0,0.476255494059295,0.512454881139399,0.374806898238915,1.5522202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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:25763334..25763361,- | |||
|id=chr7:25763334..25763361,- | |||
|ontology_enrichment_celltype=CL:0000117!5.22e-19!23;CL:0000337!5.22e-19!23;CL:0000540!4.32e-11!33;CL:0000047!4.32e-11!33;CL:0000031!4.32e-11!33;CL:0000404!4.32e-11!33;CL:0000393!2.23e-08!39;CL:0000211!2.23e-08!39;CL:0000221!2.08e-07!44;CL:0000133!2.08e-07!44;CL:0002319!5.03e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.97e-13,23;CL:0000337,9.97e-13,23;CL:0002610,1.28e-08,3;CL:0000540,4.21e-08,33;CL:0000047,4.21e-08,33;CL:0000031,4.21e-08,33;CL:0000404,4.21e-08,33;CL:0002614,6.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.32e-35!71;UBERON:0003075!5.32e-35!71;UBERON:0007284!5.32e-35!71;UBERON:0001049!4.51e-31!52;UBERON:0005068!4.51e-31!52;UBERON:0006241!4.51e-31!52;UBERON:0007135!4.51e-31!52;UBERON:0000033!3.62e-30!63;UBERON:0000955!1.60e-29!50;UBERON:0006238!1.60e-29!50;UBERON:0002020!2.96e-29!34;UBERON:0002616!2.80e-28!49;UBERON:0004121!5.74e-28!102;UBERON:0000924!5.74e-28!102;UBERON:0006601!5.74e-28!102;UBERON:0001017!1.08e-26!73;UBERON:0005743!1.08e-26!73;UBERON:0000073!1.50e-25!75;UBERON:0001016!1.50e-25!75;UBERON:0003056!2.14e-24!49;UBERON:0002791!6.35e-24!29;UBERON:0003528!6.35e-24!29;UBERON:0001893!6.35e-24!29;UBERON:0003080!3.49e-22!40;UBERON:0002780!3.81e-21!39;UBERON:0001890!3.81e-21!39;UBERON:0006240!3.81e-21!39;UBERON:0007811!1.03e-20!86;UBERON:0000153!1.31e-17!94;UBERON:0000956!3.05e-16!21;UBERON:0001869!3.05e-16!21;UBERON:0000203!3.05e-16!21;UBERON:0002619!2.04e-13!17;UBERON:0002021!1.20e-12!10;UBERON:0000411!1.20e-12!10;UBERON:0001950!1.20e-12!10;UBERON:0003076!3.16e-09!12;UBERON:0003057!3.16e-09!12;UBERON:0002420!7.51e-09!8;UBERON:0007245!7.51e-09!8;UBERON:0010009!7.51e-09!8;UBERON:0010011!7.51e-09!8;UBERON:0000454!7.51e-09!8;UBERON:0000025!1.28e-08!114;UBERON:0004111!1.00e-07!122;UBERON:0002298!1.01e-07!6;UBERON:0002240!1.90e-07!6;UBERON:0005174!1.90e-07!6;UBERON:0001137!1.90e-07!6;UBERON:0000475!3.76e-07!200;UBERON:0000064!5.55e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.95e-43,54;UBERON:0001049,1.30e-38,52;UBERON:0005068,1.30e-38,52;UBERON:0006241,1.30e-38,52;UBERON:0007135,1.30e-38,52;UBERON:0001017,1.00e-34,73;UBERON:0001016,1.31e-33,75;UBERON:0002020,6.59e-33,34;UBERON:0002346,2.83e-32,64;UBERON:0003075,2.83e-32,64;UBERON:0007284,2.83e-32,64;UBERON:0000955,3.80e-32,47;UBERON:0006238,3.80e-32,47;UBERON:0002616,4.51e-30,46;UBERON:0010371,1.88e-27,73;UBERON:0004121,1.00e-26,95;UBERON:0000924,1.00e-26,95;UBERON:0006601,1.00e-26,95;UBERON:0003528,3.64e-26,29;UBERON:0002791,3.64e-26,29;UBERON:0001893,3.64e-26,29;UBERON:0003080,2.46e-24,40;UBERON:0002021,4.46e-24,10;UBERON:0000411,4.46e-24,10;UBERON:0001950,4.46e-24,10;UBERON:0002780,1.33e-22,39;UBERON:0001890,1.33e-22,39;UBERON:0006240,1.33e-22,39;UBERON:0003056,8.29e-21,49;UBERON:0010314,2.32e-20,92;UBERON:0002619,7.28e-19,17;UBERON:0000956,2.10e-17,21;UBERON:0001869,2.10e-17,21;UBERON:0000203,2.10e-17,21;UBERON:0003076,6.40e-15,12;UBERON:0003057,6.40e-15,12;UBERON:0000025,6.27e-14,114;UBERON:0004111,1.44e-12,122;UBERON:0002950,5.45e-10,4;UBERON:0001891,5.45e-10,4;UBERON:0009616,5.45e-10,4;UBERON:0010286,5.45e-10,4;UBERON:0002420,6.31e-10,8;UBERON:0007245,6.31e-10,8;UBERON:0010009,6.31e-10,8;UBERON:0010011,6.31e-10,8;UBERON:0000454,6.31e-10,8;UBERON:0002240,7.64e-10,6;UBERON:0005174,7.64e-10,6;UBERON:0001137,7.64e-10,6;UBERON:0004684,1.28e-08,3;UBERON:0002275,1.28e-08,3;UBERON:0011216,1.60e-08,194;UBERON:0001948,6.17e-08,5;UBERON:0002315,6.17e-08,5;UBERON:0002038,6.88e-08,3;UBERON:0009663,6.88e-08,3;UBERON:0009661,6.88e-08,3;UBERON:0000125,6.88e-08,3;UBERON:0002308,6.88e-08,3;UBERON:0000483,1.74e-07,174;UBERON:0000119,2.53e-07,176;UBERON:0004733,9.22e-07,6;UBERON:0004732,9.22e-07,6;UBERON:0002028,9.22e-07,6;UBERON:0007277,9.22e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.630974884054146,1.42825492201902,2.20868540951614,0.122490799214954,0.0958454710182364,1.83843757322004,6.60695285996332,6.00130489000382,7.0659005297872,0.527545150920775,0.548925861614458,1.04182674111352,3.35019598801657,1.68828783009504,7.02871939773326,7.95497180778903,5.26775218956681,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0.753613202763113,0.470354828542819,0.125666591329675,0,0,0,0,0.220841518460394,0,0,2.34224637609238,29.1130922470703,0,0,0,0,3.14560342750128,3.66000482254901,1.38219787324151,2.78118912307642,2.04572365864264,1.24672826735736,2.43361894601636,0,0,0,0.631325567659422,0.130120442962704,0,0,0,0.476255494059295,0.512454881139399,0.374806898238915,1.55222022443409,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0.92614151141356,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,1.50791283939272,0,0,0,2.56880943980467,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0,9.63963949265421,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,6.44455331110048,7.44764167471216,10.6548973053086,3.42541259885321,4.5323633843382,2.02506750069542,2.70192721934532,3.62513927187364,6.21312374102184,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr7:25763334..25763361,- | |||
}} |
Revision as of 12:50, 14 September 2013
Short description: | p@chr7:25763334..25763361, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25763334..25763361, - |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.97e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.97e-13 | 23 |
raphe nuclei neuron | 1.28e-08 | 3 |
neuron | 4.21e-08 | 33 |
neuronal stem cell | 4.21e-08 | 33 |
neuroblast | 4.21e-08 | 33 |
electrically signaling cell | 4.21e-08 | 33 |
neuron of the substantia nigra | 6.88e-08 | 3 |
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