FFCP PHASE1:Mm9::chr10:24504806..24504851,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=15|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:24504806..24504851,-|id=chr10:24504806..24504851,-|ontology_enrichment_celltype=CL:0000553!5.34e-09!6;CL:0000556!5.34e-09!6;CL:0002027!9.11e-08!3;CL:0002006!9.11e-08!3;CL:0002024!9.11e-08!3|ontology_enrichment_celltype_v019_2=CL:0002027,2.85e-21,3;CL:0002006,2.85e-21,3;CL:0002024,2.85e-21,3;CL:0000553,5.96e-11,6;CL:0000556,5.96e-11,6;CL:0000050,1.78e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!2.14e-13!6;UBERON:0004457!2.14e-13!6;UBERON:0000042!2.14e-13!6;UBERON:0004854!2.14e-13!6;UBERON:0009034!2.14e-13!6;UBERON:0002095!2.14e-13!6;UBERON:0004782!2.14e-13!6;UBERON:0003281!2.14e-13!6;UBERON:0009664!2.14e-13!6;UBERON:0002296!2.14e-13!6;UBERON:0005602!2.14e-13!6;UBERON:0001179!2.14e-13!6;UBERON:0006293!2.14e-13!6;UBERON:0003887!2.38e-10!10;UBERON:0005172!1.00e-08!49;UBERON:0005173!1.00e-08!49;UBERON:0002417!1.00e-08!49;UBERON:0000916!1.00e-08!49;UBERON:0002405!1.33e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.64e-29,6;UBERON:0004457,7.64e-29,6;UBERON:0000042,7.64e-29,6;UBERON:0004854,7.64e-29,6;UBERON:0009034,7.64e-29,6;UBERON:0002095,7.64e-29,6;UBERON:0004782,7.64e-29,6;UBERON:0003281,7.64e-29,6;UBERON:0009664,7.64e-29,6;UBERON:0002296,7.64e-29,6;UBERON:0005602,7.64e-29,6;UBERON:0001179,7.64e-29,6;UBERON:0006293,7.64e-29,6;UBERON:0003887,1.93e-24,10;UBERON:0000945,7.62e-11,16;UBERON:0010039,7.62e-11,16;UBERON:0005172,2.14e-10,49;UBERON:0005173,2.14e-10,49;UBERON:0002417,2.14e-10,49;UBERON:0000916,2.14e-10,49;UBERON:0002390,3.68e-09,45;UBERON:0003061,3.68e-09,45;UBERON:0002075,4.00e-09,19;UBERON:0002193,1.53e-08,48;UBERON:0002405,1.53e-08,48;UBERON:0009569,1.76e-07,66;UBERON:0004872,3.19e-07,33;UBERON:0004923,3.31e-07,24;UBERON:0003081,7.28e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,3.23960427823721,6.99561878128147,0,0.137114433605739,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0.884610551949874,0,1.76673214768315,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49288364732112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,1.16791574001266,0.982794975566015,3.82265591054251,2.02860121388503,0.964708639009667,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93003025835061,0.206386867963223,1.29636169158798,4.52084296811258,8.33834789098253,5.26189798375002,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0.441182838239031,0.695603506861264|short_description=p@chr10:24504806..24504851,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:24504806..24504851,- | |||
|id=chr10:24504806..24504851,- | |||
|ontology_enrichment_celltype=CL:0000553!5.34e-09!6;CL:0000556!5.34e-09!6;CL:0002027!9.11e-08!3;CL:0002006!9.11e-08!3;CL:0002024!9.11e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,2.85e-21,3;CL:0002006,2.85e-21,3;CL:0002024,2.85e-21,3;CL:0000553,5.96e-11,6;CL:0000556,5.96e-11,6;CL:0000050,1.78e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.14e-13!6;UBERON:0004457!2.14e-13!6;UBERON:0000042!2.14e-13!6;UBERON:0004854!2.14e-13!6;UBERON:0009034!2.14e-13!6;UBERON:0002095!2.14e-13!6;UBERON:0004782!2.14e-13!6;UBERON:0003281!2.14e-13!6;UBERON:0009664!2.14e-13!6;UBERON:0002296!2.14e-13!6;UBERON:0005602!2.14e-13!6;UBERON:0001179!2.14e-13!6;UBERON:0006293!2.14e-13!6;UBERON:0003887!2.38e-10!10;UBERON:0005172!1.00e-08!49;UBERON:0005173!1.00e-08!49;UBERON:0002417!1.00e-08!49;UBERON:0000916!1.00e-08!49;UBERON:0002405!1.33e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.64e-29,6;UBERON:0004457,7.64e-29,6;UBERON:0000042,7.64e-29,6;UBERON:0004854,7.64e-29,6;UBERON:0009034,7.64e-29,6;UBERON:0002095,7.64e-29,6;UBERON:0004782,7.64e-29,6;UBERON:0003281,7.64e-29,6;UBERON:0009664,7.64e-29,6;UBERON:0002296,7.64e-29,6;UBERON:0005602,7.64e-29,6;UBERON:0001179,7.64e-29,6;UBERON:0006293,7.64e-29,6;UBERON:0003887,1.93e-24,10;UBERON:0000945,7.62e-11,16;UBERON:0010039,7.62e-11,16;UBERON:0005172,2.14e-10,49;UBERON:0005173,2.14e-10,49;UBERON:0002417,2.14e-10,49;UBERON:0000916,2.14e-10,49;UBERON:0002390,3.68e-09,45;UBERON:0003061,3.68e-09,45;UBERON:0002075,4.00e-09,19;UBERON:0002193,1.53e-08,48;UBERON:0002405,1.53e-08,48;UBERON:0009569,1.76e-07,66;UBERON:0004872,3.19e-07,33;UBERON:0004923,3.31e-07,24;UBERON:0003081,7.28e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,3.23960427823721,6.99561878128147,0,0.137114433605739,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0.884610551949874,0,1.76673214768315,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49288364732112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,1.16791574001266,0.982794975566015,3.82265591054251,2.02860121388503,0.964708639009667,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93003025835061,0.206386867963223,1.29636169158798,4.52084296811258,8.33834789098253,5.26189798375002,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0.441182838239031,0.695603506861264 | |||
|short_description=p@chr10:24504806..24504851,- | |||
}} |
Revision as of 16:29, 12 September 2013
Short description: | p@chr10:24504806..24504851, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:24504806..24504851, - |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 2.85e-21 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.85e-21 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.85e-21 | 3 |
megakaryocyte progenitor cell | 5.96e-11 | 6 |
megakaryocyte | 5.96e-11 | 6 |
megakaryocyte-erythroid progenitor cell | 1.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.64e-29 | 6 |
cavity lining | 7.64e-29 | 6 |
serous membrane | 7.64e-29 | 6 |
gastrointestinal system mesentery | 7.64e-29 | 6 |
stomach region | 7.64e-29 | 6 |
mesentery | 7.64e-29 | 6 |
gastrointestinal system serosa | 7.64e-29 | 6 |
mesentery of stomach | 7.64e-29 | 6 |
gut mesentery | 7.64e-29 | 6 |
dorsal mesentery | 7.64e-29 | 6 |
dorsal mesogastrium | 7.64e-29 | 6 |
peritoneal cavity | 7.64e-29 | 6 |
spleen primordium | 7.64e-29 | 6 |
intraembryonic coelom | 1.93e-24 | 10 |
stomach | 7.62e-11 | 16 |
food storage organ | 7.62e-11 | 16 |
abdomen element | 2.14e-10 | 49 |
abdominal segment element | 2.14e-10 | 49 |
abdominal segment of trunk | 2.14e-10 | 49 |
abdomen | 2.14e-10 | 49 |
hematopoietic system | 3.68e-09 | 45 |
blood island | 3.68e-09 | 45 |
viscus | 4.00e-09 | 19 |
hemolymphoid system | 1.53e-08 | 48 |
immune system | 1.53e-08 | 48 |
subdivision of trunk | 1.76e-07 | 66 |
splanchnic layer of lateral plate mesoderm | 3.19e-07 | 33 |
organ component layer | 3.31e-07 | 24 |
lateral plate mesoderm | 7.28e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.