FFCP PHASE1:Mm9::chr15:25294555..25294569,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:25294555..25294569,-|id=chr15:25294555..25294569,-|ontology_enrichment_celltype=CL:0000540!7.91e-20!33;CL:0000047!7.91e-20!33;CL:0000031!7.91e-20!33;CL:0000404!7.91e-20!33;CL:0000117!1.98e-19!23;CL:0000337!1.98e-19!23;CL:0000393!5.38e-19!39;CL:0000211!5.38e-19!39;CL:0002319!6.58e-17!43;CL:0000221!2.88e-16!44;CL:0000133!2.88e-16!44;CL:0000055!3.94e-16!50;CL:0002321!4.01e-09!70;CL:0000220!4.01e-09!70;CL:0002609!1.51e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,4.29e-37,23;CL:0000337,4.29e-37,23;CL:0000540,1.87e-29,33;CL:0000047,1.87e-29,33;CL:0000031,1.87e-29,33;CL:0000404,1.87e-29,33;CL:0000393,1.20e-24,39;CL:0000211,1.20e-24,39;CL:0002319,3.48e-22,43;CL:0000221,1.22e-21,44;CL:0000133,1.22e-21,44;CL:0002613,2.15e-17,3;CL:0002612,8.08e-16,3;CL:0002609,4.20e-14,6;CL:0002321,6.85e-13,70;CL:0000723,1.88e-09,91;CL:0000048,1.88e-09,91;CL:0000034,9.69e-09,97;CL:0000120,3.63e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.82e-20!34;UBERON:0001017!6.61e-20!73;UBERON:0005743!6.61e-20!73;UBERON:0000073!6.11e-19!75;UBERON:0001016!6.11e-19!75;UBERON:0002346!1.17e-15!71;UBERON:0003075!1.17e-15!71;UBERON:0007284!1.17e-15!71;UBERON:0004121!1.45e-15!102;UBERON:0000924!1.45e-15!102;UBERON:0006601!1.45e-15!102;UBERON:0002791!1.52e-15!29;UBERON:0003528!1.52e-15!29;UBERON:0001893!1.52e-15!29;UBERON:0001049!3.08e-14!52;UBERON:0005068!3.08e-14!52;UBERON:0006241!3.08e-14!52;UBERON:0007135!3.08e-14!52;UBERON:0003056!3.56e-14!49;UBERON:0002780!1.94e-13!39;UBERON:0001890!1.94e-13!39;UBERON:0006240!1.94e-13!39;UBERON:0003080!7.22e-13!40;UBERON:0000956!5.42e-12!21;UBERON:0001869!5.42e-12!21;UBERON:0000203!5.42e-12!21;UBERON:0002616!1.43e-11!49;UBERON:0000955!3.85e-11!50;UBERON:0006238!3.85e-11!50;UBERON:0000033!4.32e-11!63;UBERON:0002619!1.04e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.11e-28,34;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0001049,7.97e-18,52;UBERON:0005068,7.97e-18,52;UBERON:0006241,7.97e-18,52;UBERON:0007135,7.97e-18,52;UBERON:0000073,4.28e-17,54;UBERON:0003528,7.65e-17,29;UBERON:0002791,7.65e-17,29;UBERON:0001893,7.65e-17,29;UBERON:0001948,1.05e-16,5;UBERON:0002315,1.05e-16,5;UBERON:0002346,2.25e-16,64;UBERON:0003075,2.25e-16,64;UBERON:0007284,2.25e-16,64;UBERON:0002257,8.08e-16,3;UBERON:0010371,4.16e-14,73;UBERON:0002240,5.74e-14,6;UBERON:0005174,5.74e-14,6;UBERON:0001137,5.74e-14,6;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002780,3.48e-12,39;UBERON:0001890,3.48e-12,39;UBERON:0006240,3.48e-12,39;UBERON:0003080,7.59e-12,40;UBERON:0000956,2.40e-11,21;UBERON:0001869,2.40e-11,21;UBERON:0000203,2.40e-11,21;UBERON:0010314,9.13e-11,92;UBERON:0000369,1.19e-10,5;UBERON:0002435,1.19e-10,5;UBERON:0000204,1.19e-10,5;UBERON:0010082,1.19e-10,5;UBERON:0002616,4.01e-10,46;UBERON:0000955,7.04e-10,47;UBERON:0006238,7.04e-10,47;UBERON:0003056,2.03e-09,49;UBERON:0003076,4.45e-07,12;UBERON:0003057,4.45e-07,12;UBERON:0000025,4.89e-07,114;UBERON:0002420,7.97e-07,8;UBERON:0007245,7.97e-07,8;UBERON:0010009,7.97e-07,8;UBERON:0010011,7.97e-07,8;UBERON:0000454,7.97e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,0.768436610643109,1.24427534770173,1.08004750665353,2.3135745748652,1.42825492201902,0.883474163806454,1.34739879136449,0.958454710182364,0.919218786610021,0,0.255374676170375,0.768032666281217,2.37395317914349,2.28719109006024,3.12548022334056,0.558365998002762,0,0.45839474333043,1.17851434189467,1.13897344639282,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,0.101839363850316,0,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0.222798674082394,0.566153061577665,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.0897138566094757,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,1.38097570952153,1.14579102687879,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0,0.51776031175182,0.207574695168353,0.798049746802062,0.170733605754134,0.486213434136588,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0,0,0.231867835620421|short_description=p@chr15:25294555..25294569,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:25294555..25294569,- | |||
|id=chr15:25294555..25294569,- | |||
|ontology_enrichment_celltype=CL:0000540!7.91e-20!33;CL:0000047!7.91e-20!33;CL:0000031!7.91e-20!33;CL:0000404!7.91e-20!33;CL:0000117!1.98e-19!23;CL:0000337!1.98e-19!23;CL:0000393!5.38e-19!39;CL:0000211!5.38e-19!39;CL:0002319!6.58e-17!43;CL:0000221!2.88e-16!44;CL:0000133!2.88e-16!44;CL:0000055!3.94e-16!50;CL:0002321!4.01e-09!70;CL:0000220!4.01e-09!70;CL:0002609!1.51e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.29e-37,23;CL:0000337,4.29e-37,23;CL:0000540,1.87e-29,33;CL:0000047,1.87e-29,33;CL:0000031,1.87e-29,33;CL:0000404,1.87e-29,33;CL:0000393,1.20e-24,39;CL:0000211,1.20e-24,39;CL:0002319,3.48e-22,43;CL:0000221,1.22e-21,44;CL:0000133,1.22e-21,44;CL:0002613,2.15e-17,3;CL:0002612,8.08e-16,3;CL:0002609,4.20e-14,6;CL:0002321,6.85e-13,70;CL:0000723,1.88e-09,91;CL:0000048,1.88e-09,91;CL:0000034,9.69e-09,97;CL:0000120,3.63e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.82e-20!34;UBERON:0001017!6.61e-20!73;UBERON:0005743!6.61e-20!73;UBERON:0000073!6.11e-19!75;UBERON:0001016!6.11e-19!75;UBERON:0002346!1.17e-15!71;UBERON:0003075!1.17e-15!71;UBERON:0007284!1.17e-15!71;UBERON:0004121!1.45e-15!102;UBERON:0000924!1.45e-15!102;UBERON:0006601!1.45e-15!102;UBERON:0002791!1.52e-15!29;UBERON:0003528!1.52e-15!29;UBERON:0001893!1.52e-15!29;UBERON:0001049!3.08e-14!52;UBERON:0005068!3.08e-14!52;UBERON:0006241!3.08e-14!52;UBERON:0007135!3.08e-14!52;UBERON:0003056!3.56e-14!49;UBERON:0002780!1.94e-13!39;UBERON:0001890!1.94e-13!39;UBERON:0006240!1.94e-13!39;UBERON:0003080!7.22e-13!40;UBERON:0000956!5.42e-12!21;UBERON:0001869!5.42e-12!21;UBERON:0000203!5.42e-12!21;UBERON:0002616!1.43e-11!49;UBERON:0000955!3.85e-11!50;UBERON:0006238!3.85e-11!50;UBERON:0000033!4.32e-11!63;UBERON:0002619!1.04e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.11e-28,34;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0001049,7.97e-18,52;UBERON:0005068,7.97e-18,52;UBERON:0006241,7.97e-18,52;UBERON:0007135,7.97e-18,52;UBERON:0000073,4.28e-17,54;UBERON:0003528,7.65e-17,29;UBERON:0002791,7.65e-17,29;UBERON:0001893,7.65e-17,29;UBERON:0001948,1.05e-16,5;UBERON:0002315,1.05e-16,5;UBERON:0002346,2.25e-16,64;UBERON:0003075,2.25e-16,64;UBERON:0007284,2.25e-16,64;UBERON:0002257,8.08e-16,3;UBERON:0010371,4.16e-14,73;UBERON:0002240,5.74e-14,6;UBERON:0005174,5.74e-14,6;UBERON:0001137,5.74e-14,6;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002780,3.48e-12,39;UBERON:0001890,3.48e-12,39;UBERON:0006240,3.48e-12,39;UBERON:0003080,7.59e-12,40;UBERON:0000956,2.40e-11,21;UBERON:0001869,2.40e-11,21;UBERON:0000203,2.40e-11,21;UBERON:0010314,9.13e-11,92;UBERON:0000369,1.19e-10,5;UBERON:0002435,1.19e-10,5;UBERON:0000204,1.19e-10,5;UBERON:0010082,1.19e-10,5;UBERON:0002616,4.01e-10,46;UBERON:0000955,7.04e-10,47;UBERON:0006238,7.04e-10,47;UBERON:0003056,2.03e-09,49;UBERON:0003076,4.45e-07,12;UBERON:0003057,4.45e-07,12;UBERON:0000025,4.89e-07,114;UBERON:0002420,7.97e-07,8;UBERON:0007245,7.97e-07,8;UBERON:0010009,7.97e-07,8;UBERON:0010011,7.97e-07,8;UBERON:0000454,7.97e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,0.768436610643109,1.24427534770173,1.08004750665353,2.3135745748652,1.42825492201902,0.883474163806454,1.34739879136449,0.958454710182364,0.919218786610021,0,0.255374676170375,0.768032666281217,2.37395317914349,2.28719109006024,3.12548022334056,0.558365998002762,0,0.45839474333043,1.17851434189467,1.13897344639282,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,0.101839363850316,0,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0.222798674082394,0.566153061577665,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.0897138566094757,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,1.38097570952153,1.14579102687879,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0,0.51776031175182,0.207574695168353,0.798049746802062,0.170733605754134,0.486213434136588,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0,0,0.231867835620421 | |||
|short_description=p@chr15:25294555..25294569,- | |||
}} |
Revision as of 10:16, 13 September 2013
Short description: | p@chr15:25294555..25294569, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:25294555..25294569, - |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.29e-37 | 23 |
neuroblast (sensu Vertebrata) | 4.29e-37 | 23 |
neuron | 1.87e-29 | 33 |
neuronal stem cell | 1.87e-29 | 33 |
neuroblast | 1.87e-29 | 33 |
electrically signaling cell | 1.87e-29 | 33 |
electrically responsive cell | 1.20e-24 | 39 |
electrically active cell | 1.20e-24 | 39 |
neural cell | 3.48e-22 | 43 |
ectodermal cell | 1.22e-21 | 44 |
neurectodermal cell | 1.22e-21 | 44 |
striatum neuron | 2.15e-17 | 3 |
neuron of the ventral spinal cord | 8.08e-16 | 3 |
neuron of cerebral cortex | 4.20e-14 | 6 |
embryonic cell | 6.85e-13 | 70 |
somatic stem cell | 1.88e-09 | 91 |
multi fate stem cell | 1.88e-09 | 91 |
stem cell | 9.69e-09 | 97 |
granule cell | 3.63e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.