Personal tools

FFCP PHASE1:Mm9::chr1:99658188..99658243,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=227399|HGNC=|MCL_coexpression_id=10|UniProt=Q6ZQB6|association_with_transcript=-55bp_to_ENSMUST00000163249_5end|description=CAGE_peak_3_at_Ppip5k2_5end|id=chr1:99658188..99658243,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,4.97e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.09e-13!18;UBERON:0000948!7.09e-13!18;UBERON:0005498!7.09e-13!18;UBERON:0004140!7.09e-13!18;UBERON:0009881!7.09e-13!18;UBERON:0004141!7.09e-13!18;UBERON:0003084!7.09e-13!18;UBERON:0007005!7.09e-13!18;UBERON:0004139!7.09e-13!18;UBERON:0004291!7.09e-13!18;UBERON:0004535!1.01e-10!23;UBERON:0001009!1.01e-10!23;UBERON:0000025!5.67e-09!114;UBERON:0000033!1.14e-08!63;UBERON:0004111!1.82e-08!122;UBERON:0002346!1.89e-07!71;UBERON:0003075!1.89e-07!71;UBERON:0007284!1.89e-07!71;UBERON:0000970!2.56e-07!9;UBERON:0000019!2.56e-07!9;UBERON:0000047!2.56e-07!9;UBERON:0004088!2.56e-07!9;UBERON:0002104!2.56e-07!9;UBERON:0001456!2.56e-07!9;UBERON:0003072!2.56e-07!9;UBERON:0003071!2.56e-07!9;UBERON:0004128!2.56e-07!9;UBERON:0000020!8.33e-07!12;UBERON:0001032!8.33e-07!12;UBERON:0004456!8.33e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.54e-30,18;UBERON:0000948,1.54e-30,18;UBERON:0005498,1.54e-30,18;UBERON:0004140,1.54e-30,18;UBERON:0009881,1.54e-30,18;UBERON:0004141,1.54e-30,18;UBERON:0003084,1.54e-30,18;UBERON:0007005,1.54e-30,18;UBERON:0004139,1.54e-30,18;UBERON:0004291,1.54e-30,18;UBERON:0004535,3.22e-23,23;UBERON:0001009,3.22e-23,23;UBERON:0010314,3.39e-21,92;UBERON:0000970,1.30e-18,9;UBERON:0000019,1.30e-18,9;UBERON:0000047,1.30e-18,9;UBERON:0010312,1.30e-18,9;UBERON:0004088,1.30e-18,9;UBERON:0002104,1.30e-18,9;UBERON:0001456,1.30e-18,9;UBERON:0003072,1.30e-18,9;UBERON:0004128,1.30e-18,9;UBERON:0003071,1.30e-18,9;UBERON:0004872,3.10e-15,33;UBERON:0001444,5.26e-15,11;UBERON:0000020,1.19e-13,12;UBERON:0001032,1.19e-13,12;UBERON:0004456,1.19e-13,12;UBERON:0003103,9.03e-13,43;UBERON:0000033,1.66e-12,13;UBERON:0005085,1.66e-12,13;UBERON:0003914,8.84e-10,47;UBERON:0000483,1.73e-08,174;UBERON:0000119,2.52e-08,176;UBERON:0004684,4.97e-08,3;UBERON:0002275,4.97e-08,3;UBERON:0000025,6.52e-07,114;UBERON:0001896,9.20e-07,2;UBERON:0002298,9.20e-07,2;UBERON:0005290,9.20e-07,2;UBERON:0010096,9.20e-07,2;UBERON:0001048,9.46e-07,134|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0,0,0,1.10115880999389,1.0214987046815,1.38245879930619,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.284743361598206,0,0.151452386666368,0.755715601067855,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,0,0.220841518460394,0,0,1.17112318804619,0.83778682725382,0.255457055208591,0,0,0,1.49790639404823,2.74500361691176,0.125654352112864,0.869121600961382,0.511430914660661,2.28566849015516,0.648965052271031,0,0,0.252722758433675,0.210441855886474,2.73252930221678,2.98872735763515,3.60124259610698,3.46621081022145,4.83059143974428,4.09963904911519,3.37326208415024,3.62184719034622,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.621377317606506,2.57978665979206,2.88099298337624,4.97163944728941,10.231740050865,11.415766353666,17.2075119115302,14.7550370769791,19.4998121753173,17.7724637906559,33.8184976002936,50.586937156614,49.4155957497623,39.079920521807,53.0115354103468,0.630869845692382,0.102904612379284,0,0,0.426576501070468,0,0,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0.610953983535943,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0,0,0,0,0,0,4.65596710964597,5.97779601620236,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0.220528398054962,0,0,0.180938774784468,0,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.68741272937475,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.320125762024346,0.17230640686684,0,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.592302255241736,0.365855945745545,0,0.271608227691724,0.561142271657738,0.355905054372522,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0,0.220591419119515,0.231867835620421|short_description=p3@Ppip5k2}}
|EntrezGene=227399
|HGNC=
|MCL_coexpression_id=10
|UniProt=Q6ZQB6
|association_with_transcript=-55bp_to_ENSMUST00000163249_5end
|description=CAGE_peak_3_at_Ppip5k2_5end
|id=chr1:99658188..99658243,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,4.97e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!7.09e-13!18;UBERON:0000948!7.09e-13!18;UBERON:0005498!7.09e-13!18;UBERON:0004140!7.09e-13!18;UBERON:0009881!7.09e-13!18;UBERON:0004141!7.09e-13!18;UBERON:0003084!7.09e-13!18;UBERON:0007005!7.09e-13!18;UBERON:0004139!7.09e-13!18;UBERON:0004291!7.09e-13!18;UBERON:0004535!1.01e-10!23;UBERON:0001009!1.01e-10!23;UBERON:0000025!5.67e-09!114;UBERON:0000033!1.14e-08!63;UBERON:0004111!1.82e-08!122;UBERON:0002346!1.89e-07!71;UBERON:0003075!1.89e-07!71;UBERON:0007284!1.89e-07!71;UBERON:0000970!2.56e-07!9;UBERON:0000019!2.56e-07!9;UBERON:0000047!2.56e-07!9;UBERON:0004088!2.56e-07!9;UBERON:0002104!2.56e-07!9;UBERON:0001456!2.56e-07!9;UBERON:0003072!2.56e-07!9;UBERON:0003071!2.56e-07!9;UBERON:0004128!2.56e-07!9;UBERON:0000020!8.33e-07!12;UBERON:0001032!8.33e-07!12;UBERON:0004456!8.33e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.54e-30,18;UBERON:0000948,1.54e-30,18;UBERON:0005498,1.54e-30,18;UBERON:0004140,1.54e-30,18;UBERON:0009881,1.54e-30,18;UBERON:0004141,1.54e-30,18;UBERON:0003084,1.54e-30,18;UBERON:0007005,1.54e-30,18;UBERON:0004139,1.54e-30,18;UBERON:0004291,1.54e-30,18;UBERON:0004535,3.22e-23,23;UBERON:0001009,3.22e-23,23;UBERON:0010314,3.39e-21,92;UBERON:0000970,1.30e-18,9;UBERON:0000019,1.30e-18,9;UBERON:0000047,1.30e-18,9;UBERON:0010312,1.30e-18,9;UBERON:0004088,1.30e-18,9;UBERON:0002104,1.30e-18,9;UBERON:0001456,1.30e-18,9;UBERON:0003072,1.30e-18,9;UBERON:0004128,1.30e-18,9;UBERON:0003071,1.30e-18,9;UBERON:0004872,3.10e-15,33;UBERON:0001444,5.26e-15,11;UBERON:0000020,1.19e-13,12;UBERON:0001032,1.19e-13,12;UBERON:0004456,1.19e-13,12;UBERON:0003103,9.03e-13,43;UBERON:0000033,1.66e-12,13;UBERON:0005085,1.66e-12,13;UBERON:0003914,8.84e-10,47;UBERON:0000483,1.73e-08,174;UBERON:0000119,2.52e-08,176;UBERON:0004684,4.97e-08,3;UBERON:0002275,4.97e-08,3;UBERON:0000025,6.52e-07,114;UBERON:0001896,9.20e-07,2;UBERON:0002298,9.20e-07,2;UBERON:0005290,9.20e-07,2;UBERON:0010096,9.20e-07,2;UBERON:0001048,9.46e-07,134
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0,0,0,1.10115880999389,1.0214987046815,1.38245879930619,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.284743361598206,0,0.151452386666368,0.755715601067855,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,0,0.220841518460394,0,0,1.17112318804619,0.83778682725382,0.255457055208591,0,0,0,1.49790639404823,2.74500361691176,0.125654352112864,0.869121600961382,0.511430914660661,2.28566849015516,0.648965052271031,0,0,0.252722758433675,0.210441855886474,2.73252930221678,2.98872735763515,3.60124259610698,3.46621081022145,4.83059143974428,4.09963904911519,3.37326208415024,3.62184719034622,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.621377317606506,2.57978665979206,2.88099298337624,4.97163944728941,10.231740050865,11.415766353666,17.2075119115302,14.7550370769791,19.4998121753173,17.7724637906559,33.8184976002936,50.586937156614,49.4155957497623,39.079920521807,53.0115354103468,0.630869845692382,0.102904612379284,0,0,0.426576501070468,0,0,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0.610953983535943,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0,0,0,0,0,0,4.65596710964597,5.97779601620236,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0.220528398054962,0,0,0.180938774784468,0,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.68741272937475,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.320125762024346,0.17230640686684,0,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.592302255241736,0.365855945745545,0,0.271608227691724,0.561142271657738,0.355905054372522,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0,0.220591419119515,0.231867835620421
|short_description=p3@Ppip5k2
}}

Revision as of 21:23, 13 September 2013

Short description:p3@Ppip5k2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ppip5k2_5end
Coexpression cluster:MCL_coexpression_mm9:10
Association with transcript: -55bp_to_ENSMUST00000163249_5end
EntrezGene:Ppip5k2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ppip5k2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C810.23
heart, embryo E16.CNhs11021.457-17C611.42
heart, embryo E17.CNhs11025.479-18E517.21
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E319.50
heart, neonate N03.CNhs11221.1349-25I217.77
heart, neonate N10.CNhs11118.749-24G133.82
heart, neonate N16.CNhs11209.782-15G150.59
heart, neonate N20.CNhs11127.821-26I649.42
heart, neonate N25.CNhs11196.1351-25D339.08
heart, neonate N30.CNhs11202.1390-42D253.01
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A35.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron4.97e-083

Uber anatomy
Ontology termp-valuen
primary circulatory organ1.54e-3018
heart1.54e-3018
primitive heart tube1.54e-3018
primary heart field1.54e-3018
anterior lateral plate mesoderm1.54e-3018
heart tube1.54e-3018
heart primordium1.54e-3018
cardiac mesoderm1.54e-3018
cardiogenic plate1.54e-3018
heart rudiment1.54e-3018
cardiovascular system3.22e-2323
circulatory system3.22e-2323
structure with developmental contribution from neural crest3.39e-2192
eye1.30e-189
camera-type eye1.30e-189
simple eye1.30e-189
immature eye1.30e-189
ocular region1.30e-189
visual system1.30e-189
face1.30e-189
optic cup1.30e-189
optic vesicle1.30e-189
eye primordium1.30e-189
splanchnic layer of lateral plate mesoderm3.10e-1533
subdivision of head5.26e-1511
sense organ1.19e-1312
sensory system1.19e-1312
entire sense organ system1.19e-1312
compound organ9.03e-1343
head1.66e-1213
ectodermal placode1.66e-1213
epithelial tube8.84e-1047
epithelium1.73e-08174
cell layer2.52e-08176
raphe nuclei4.97e-083
reticular formation4.97e-083
tube6.52e-07114
medulla oblongata9.20e-072
brainstem9.20e-072
myelencephalon9.20e-072
future myelencephalon9.20e-072
primordium9.46e-07134







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:99658188..99658243,-&oldid=2975492"