FFCP PHASE1:Mm9::chr16:45455045..45455087,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100047671,208166|HGNC=|MCL_coexpression_id=58|UniProt=D6RI44,Q7TPQ6|association_with_transcript=3bp_to_ENSMUST00000144346,ENSMUST00000167844_5end|description=CAGE_peak_1_at_Gm17783_5end,CAGE_peak_1_at_Gm609_5end|id=chr16:45455045..45455087,-|ontology_enrichment_celltype=CL:0002563!8.90e-07!9;CL:0002251!8.90e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.52e-10,9;CL:0002251,7.52e-10,9;CL:0000239,5.86e-07,6;CL:0000677,5.86e-07,6;CL:0000584,5.86e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.11e-33!59;UBERON:0000160!9.62e-31!43;UBERON:0001007!8.38e-20!128;UBERON:0001555!8.38e-20!128;UBERON:0007026!8.38e-20!128;UBERON:0004119!4.02e-19!130;UBERON:0000925!4.02e-19!130;UBERON:0006595!4.02e-19!130;UBERON:0004921!3.14e-18!126;UBERON:0004185!3.14e-18!126;UBERON:0002108!2.89e-13!16;UBERON:0000344!2.56e-12!15;UBERON:0001045!1.54e-10!13;UBERON:0001242!2.13e-10!13;UBERON:0000060!2.13e-10!13;UBERON:0001262!2.13e-10!13;UBERON:0004786!2.13e-10!13;UBERON:0001264!1.07e-09!12;UBERON:0003922!1.07e-09!12;UBERON:0002114!1.07e-09!12;UBERON:0003923!1.07e-09!12;UBERON:0003924!1.07e-09!12;UBERON:0003921!1.07e-09!12;UBERON:0004923!1.60e-07!24;UBERON:0003350!8.90e-07!9;UBERON:0004808!8.90e-07!9;UBERON:0001277!8.90e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.42e-33,31;UBERON:0005409,2.33e-32,47;UBERON:0000344,2.46e-18,15;UBERON:0001007,2.40e-17,116;UBERON:0001555,2.40e-17,116;UBERON:0007026,2.40e-17,116;UBERON:0004119,7.79e-17,118;UBERON:0000925,7.79e-17,118;UBERON:0006595,7.79e-17,118;UBERON:0004921,1.77e-15,114;UBERON:0001242,2.16e-15,13;UBERON:0001262,2.16e-15,13;UBERON:0004786,2.16e-15,13;UBERON:0001264,5.48e-14,12;UBERON:0004923,6.19e-10,24;UBERON:0003350,7.52e-10,9;UBERON:0004808,7.52e-10,9;UBERON:0001277,7.52e-10,9;UBERON:0002075,8.94e-08,19;UBERON:0000485,9.61e-08,11;UBERON:0002108,5.75e-07,4|phase1_expression=0,86.8948765022009,100.554831905087,2.11724947914781,0,136.150089520543,110.265166361088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.5166129886528,60.1052316395985,68.9078356938024,128.797836851563,139.194416315084,19.9524590429193,19.4063199915147,80.9316363891862,0,0,0,4.04392267651784,3.15845826181135,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9864488701678,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,20.4365644166873,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.6852285622502,11.3713743665324,0,0,4.63922860759536,7.26060688644033,11.3412802360884,12.7451169495415,12.8122846617018,8.23494773620054,11.8127548136127,9.15199771389294,11.8928093142663,21.5716658077013,20.1008386383466,23.299528970761,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.889357881261447,0,0.196558995113203,0,0,0,0.50925170356284,2.01387296215567,2.2698931748505,1.37280706594041,7.18841032636773,5.95425516269605,5.61667811606209,4.04126204715379,3.04975602987251,2.41221760681684,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,3.8844901784797,5.13950046840077,10.7504895460862,7.67784921490009,12.2974059177571,12.1461297789064,18.9037539328303,16.3988794056972,5.05658812697306,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2421951384537,0,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,3.81868247206045,0,2.23651413839534,1.29606408986162,0.418176592028937,1.09181281873089,1.48350781023303,2.31429676030941,3.40282724579238,15.8130267415987,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.468207537349412,0.192075457214608,0.287177344778066,0,0.463537303779422,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0,0.145346416632329,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.0985044823755635,0.818462086339379,0.77468420592983,1.15743966588685,0,0.467863216890817,1.93383948643468,0.191288332068843,0,0.231867835620421|short_description=p1@Gm17783,p1@Gm609}} | ||
|EntrezGene=100047671,208166 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=D6RI44,Q7TPQ6 | |||
|association_with_transcript=3bp_to_ENSMUST00000144346,ENSMUST00000167844_5end | |||
|description=CAGE_peak_1_at_Gm17783_5end,CAGE_peak_1_at_Gm609_5end | |||
|id=chr16:45455045..45455087,- | |||
|ontology_enrichment_celltype=CL:0002563!8.90e-07!9;CL:0002251!8.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.52e-10,9;CL:0002251,7.52e-10,9;CL:0000239,5.86e-07,6;CL:0000677,5.86e-07,6;CL:0000584,5.86e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.11e-33!59;UBERON:0000160!9.62e-31!43;UBERON:0001007!8.38e-20!128;UBERON:0001555!8.38e-20!128;UBERON:0007026!8.38e-20!128;UBERON:0004119!4.02e-19!130;UBERON:0000925!4.02e-19!130;UBERON:0006595!4.02e-19!130;UBERON:0004921!3.14e-18!126;UBERON:0004185!3.14e-18!126;UBERON:0002108!2.89e-13!16;UBERON:0000344!2.56e-12!15;UBERON:0001045!1.54e-10!13;UBERON:0001242!2.13e-10!13;UBERON:0000060!2.13e-10!13;UBERON:0001262!2.13e-10!13;UBERON:0004786!2.13e-10!13;UBERON:0001264!1.07e-09!12;UBERON:0003922!1.07e-09!12;UBERON:0002114!1.07e-09!12;UBERON:0003923!1.07e-09!12;UBERON:0003924!1.07e-09!12;UBERON:0003921!1.07e-09!12;UBERON:0004923!1.60e-07!24;UBERON:0003350!8.90e-07!9;UBERON:0004808!8.90e-07!9;UBERON:0001277!8.90e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.42e-33,31;UBERON:0005409,2.33e-32,47;UBERON:0000344,2.46e-18,15;UBERON:0001007,2.40e-17,116;UBERON:0001555,2.40e-17,116;UBERON:0007026,2.40e-17,116;UBERON:0004119,7.79e-17,118;UBERON:0000925,7.79e-17,118;UBERON:0006595,7.79e-17,118;UBERON:0004921,1.77e-15,114;UBERON:0001242,2.16e-15,13;UBERON:0001262,2.16e-15,13;UBERON:0004786,2.16e-15,13;UBERON:0001264,5.48e-14,12;UBERON:0004923,6.19e-10,24;UBERON:0003350,7.52e-10,9;UBERON:0004808,7.52e-10,9;UBERON:0001277,7.52e-10,9;UBERON:0002075,8.94e-08,19;UBERON:0000485,9.61e-08,11;UBERON:0002108,5.75e-07,4 | |||
|phase1_expression=0,86.8948765022009,100.554831905087,2.11724947914781,0,136.150089520543,110.265166361088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.5166129886528,60.1052316395985,68.9078356938024,128.797836851563,139.194416315084,19.9524590429193,19.4063199915147,80.9316363891862,0,0,0,4.04392267651784,3.15845826181135,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9864488701678,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,20.4365644166873,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.6852285622502,11.3713743665324,0,0,4.63922860759536,7.26060688644033,11.3412802360884,12.7451169495415,12.8122846617018,8.23494773620054,11.8127548136127,9.15199771389294,11.8928093142663,21.5716658077013,20.1008386383466,23.299528970761,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.889357881261447,0,0.196558995113203,0,0,0,0.50925170356284,2.01387296215567,2.2698931748505,1.37280706594041,7.18841032636773,5.95425516269605,5.61667811606209,4.04126204715379,3.04975602987251,2.41221760681684,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,3.8844901784797,5.13950046840077,10.7504895460862,7.67784921490009,12.2974059177571,12.1461297789064,18.9037539328303,16.3988794056972,5.05658812697306,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2421951384537,0,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,3.81868247206045,0,2.23651413839534,1.29606408986162,0.418176592028937,1.09181281873089,1.48350781023303,2.31429676030941,3.40282724579238,15.8130267415987,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.468207537349412,0.192075457214608,0.287177344778066,0,0.463537303779422,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0,0.145346416632329,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.0985044823755635,0.818462086339379,0.77468420592983,1.15743966588685,0,0.467863216890817,1.93383948643468,0.191288332068843,0,0.231867835620421 | |||
|short_description=p1@Gm17783,p1@Gm609 | |||
}} |
Revision as of 12:46, 13 September 2013
Short description: | p1@Gm17783, p1@Gm609 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm17783_5end, CAGE_peak_1_at_Gm609_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 3bp_to_ENSMUST00000144346, ENSMUST00000167844_5end |
EntrezGene: | 100047671,208166 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.52e-10 | 9 |
epithelial cell of alimentary canal | 7.52e-10 | 9 |
brush border epithelial cell | 5.86e-07 | 6 |
gut absorptive cell | 5.86e-07 | 6 |
enterocyte | 5.86e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.42e-33 | 31 |
gastrointestinal system | 2.33e-32 | 47 |
mucosa | 2.46e-18 | 15 |
digestive system | 2.40e-17 | 116 |
digestive tract | 2.40e-17 | 116 |
primitive gut | 2.40e-17 | 116 |
endoderm-derived structure | 7.79e-17 | 118 |
endoderm | 7.79e-17 | 118 |
presumptive endoderm | 7.79e-17 | 118 |
subdivision of digestive tract | 1.77e-15 | 114 |
intestinal mucosa | 2.16e-15 | 13 |
wall of intestine | 2.16e-15 | 13 |
gastrointestinal system mucosa | 2.16e-15 | 13 |
pancreas | 5.48e-14 | 12 |
organ component layer | 6.19e-10 | 24 |
epithelium of mucosa | 7.52e-10 | 9 |
gastrointestinal system epithelium | 7.52e-10 | 9 |
intestinal epithelium | 7.52e-10 | 9 |
viscus | 8.94e-08 | 19 |
simple columnar epithelium | 9.61e-08 | 11 |
small intestine | 5.75e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.