FFCP PHASE1:Mm9::chr12:73317782..73317817,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:73317782..73317817,-|id=chr12:73317782..73317817,-|ontology_enrichment_celltype=CL:0000117!1.85e-21!23;CL:0000337!1.85e-21!23;CL:0000540!3.24e-18!33;CL:0000047!3.24e-18!33;CL:0000031!3.24e-18!33;CL:0000404!3.24e-18!33;CL:0002319!1.37e-16!43;CL:0000221!6.21e-16!44;CL:0000133!6.21e-16!44;CL:0000393!9.58e-14!39;CL:0000211!9.58e-14!39;CL:0000055!1.36e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.68e-37,23;CL:0000337,7.68e-37,23;CL:0000540,3.01e-26,33;CL:0000047,3.01e-26,33;CL:0000031,3.01e-26,33;CL:0000404,3.01e-26,33;CL:0000393,2.54e-21,39;CL:0000211,2.54e-21,39;CL:0002319,1.32e-20,43;CL:0000221,5.31e-20,44;CL:0000133,5.31e-20,44;CL:0002321,2.03e-10,70;CL:0002612,1.70e-07,3;CL:0002614,1.97e-07,3;CL:0002610,4.67e-07,3;CL:0002613,6.19e-07,3;CL:0000120,7.12e-07,3;CL:0000723,9.35e-07,91;CL:0000048,9.35e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.21e-36!73;UBERON:0005743!3.21e-36!73;UBERON:0000073!1.09e-35!75;UBERON:0001016!1.09e-35!75;UBERON:0001049!7.04e-30!52;UBERON:0005068!7.04e-30!52;UBERON:0006241!7.04e-30!52;UBERON:0007135!7.04e-30!52;UBERON:0002020!2.07e-28!34;UBERON:0000955!1.23e-27!50;UBERON:0006238!1.23e-27!50;UBERON:0002346!1.55e-27!71;UBERON:0003075!1.55e-27!71;UBERON:0007284!1.55e-27!71;UBERON:0004121!2.06e-27!102;UBERON:0000924!2.06e-27!102;UBERON:0006601!2.06e-27!102;UBERON:0002616!7.64e-27!49;UBERON:0000033!8.57e-27!63;UBERON:0003056!1.18e-23!49;UBERON:0002791!3.27e-23!29;UBERON:0003528!3.27e-23!29;UBERON:0001893!3.27e-23!29;UBERON:0003080!1.08e-22!40;UBERON:0002780!5.81e-22!39;UBERON:0001890!5.81e-22!39;UBERON:0006240!5.81e-22!39;UBERON:0000956!3.97e-16!21;UBERON:0001869!3.97e-16!21;UBERON:0000203!3.97e-16!21;UBERON:0007811!8.99e-15!86;UBERON:0002619!4.14e-13!17;UBERON:0000153!4.38e-12!94;UBERON:0002021!1.03e-10!10;UBERON:0000411!1.03e-10!10;UBERON:0001950!1.03e-10!10;UBERON:0002420!3.14e-08!8;UBERON:0007245!3.14e-08!8;UBERON:0010009!3.14e-08!8;UBERON:0010011!3.14e-08!8;UBERON:0000454!3.14e-08!8;UBERON:0003076!1.47e-07!12;UBERON:0003057!1.47e-07!12;UBERON:0002240!5.59e-07!6;UBERON:0005174!5.59e-07!6;UBERON:0001137!5.59e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.44e-45,73;UBERON:0002020,5.24e-44,34;UBERON:0000073,7.85e-44,54;UBERON:0001016,1.22e-43,75;UBERON:0001049,8.00e-40,52;UBERON:0005068,8.00e-40,52;UBERON:0006241,8.00e-40,52;UBERON:0007135,8.00e-40,52;UBERON:0003528,1.04e-33,29;UBERON:0002791,1.04e-33,29;UBERON:0001893,1.04e-33,29;UBERON:0002346,9.45e-33,64;UBERON:0003075,9.45e-33,64;UBERON:0007284,9.45e-33,64;UBERON:0004121,1.47e-32,95;UBERON:0000924,1.47e-32,95;UBERON:0006601,1.47e-32,95;UBERON:0000955,1.31e-30,47;UBERON:0006238,1.31e-30,47;UBERON:0002616,3.37e-29,46;UBERON:0010371,1.09e-27,73;UBERON:0003080,4.13e-27,40;UBERON:0002780,9.09e-26,39;UBERON:0001890,9.09e-26,39;UBERON:0006240,9.09e-26,39;UBERON:0000956,2.45e-22,21;UBERON:0001869,2.45e-22,21;UBERON:0000203,2.45e-22,21;UBERON:0003056,5.99e-21,49;UBERON:0002021,1.04e-20,10;UBERON:0000411,1.04e-20,10;UBERON:0001950,1.04e-20,10;UBERON:0010314,2.99e-20,92;UBERON:0002619,9.81e-19,17;UBERON:0000025,1.02e-13,114;UBERON:0002240,6.58e-13,6;UBERON:0005174,6.58e-13,6;UBERON:0001137,6.58e-13,6;UBERON:0003076,8.46e-13,12;UBERON:0003057,8.46e-13,12;UBERON:0002420,2.22e-12,8;UBERON:0007245,2.22e-12,8;UBERON:0010009,2.22e-12,8;UBERON:0010011,2.22e-12,8;UBERON:0000454,2.22e-12,8;UBERON:0004111,2.75e-12,122;UBERON:0001948,1.27e-11,5;UBERON:0002315,1.27e-11,5;UBERON:0011216,3.02e-11,194;UBERON:0002950,9.45e-09,4;UBERON:0001891,9.45e-09,4;UBERON:0009616,9.45e-09,4;UBERON:0010286,9.45e-09,4;UBERON:0002257,1.70e-07,3;UBERON:0002038,1.97e-07,3;UBERON:0009663,1.97e-07,3;UBERON:0009661,1.97e-07,3;UBERON:0000125,1.97e-07,3;UBERON:0002308,1.97e-07,3;UBERON:0004684,4.67e-07,3;UBERON:0002275,4.67e-07,3;UBERON:0000483,7.83e-07,174;UBERON:0000369,8.81e-07,5;UBERON:0002435,8.81e-07,5;UBERON:0000204,8.81e-07,5;UBERON:0010082,8.81e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,2.42779753031517,6.87688273053643,1.90149421051854,0,0,0,0,0,1.19840044207362,0.768436610643109,1.45165457231869,3.91517221161903,0.630974884054146,6.28432165688368,5.30084498283872,0.857435594504678,1.91690942036473,2.75765635983006,3.30347642998166,2.80912143787413,4.30098293117482,2.37395317914349,4.48289453651807,3.12548022334056,4.18774498502071,6.19038871034848,3.51435969886663,4.71405736757868,7.83044244395066,2.98239113320481,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,3.97948742945565,0.255457055208591,0,0,0,1.19832511523858,0.915001205637253,2.01046963380583,2.43354048269187,1.27857728665165,2.0778804455956,0.973447578406546,0,0,0,0.420883711772948,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.92614151141356,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,1.28440471990234,1.75817529888305,0,0,0,0.780877488593277,1.07711698866399,0,0.222798674082394,0,0,0,0.395287777946524,1.28528526568723,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,6.21227026878773,5.9842280745933,8.59343270159095,3.43706364687375,5.48066015816514,2.2661816921691,4.05013500139084,5.85417564191487,2.71885445390523,2.5888015587591,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.962757628775446,0,0.50695859978048,0.754505365544305,0.280924522409647,0.256100609619477,0.34461281373368,0,0.115884325944855,0.38581844092741,1.64834360321323,0.441596760403192,0,0.177475806159338,0.715308569841963,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.464810523557898,0,0.749431733813838,0.233931608445408,0.429742108096597,0.57386499620653,0,0|short_description=p@chr12:73317782..73317817,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:73317782..73317817,- | |||
|id=chr12:73317782..73317817,- | |||
|ontology_enrichment_celltype=CL:0000117!1.85e-21!23;CL:0000337!1.85e-21!23;CL:0000540!3.24e-18!33;CL:0000047!3.24e-18!33;CL:0000031!3.24e-18!33;CL:0000404!3.24e-18!33;CL:0002319!1.37e-16!43;CL:0000221!6.21e-16!44;CL:0000133!6.21e-16!44;CL:0000393!9.58e-14!39;CL:0000211!9.58e-14!39;CL:0000055!1.36e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.68e-37,23;CL:0000337,7.68e-37,23;CL:0000540,3.01e-26,33;CL:0000047,3.01e-26,33;CL:0000031,3.01e-26,33;CL:0000404,3.01e-26,33;CL:0000393,2.54e-21,39;CL:0000211,2.54e-21,39;CL:0002319,1.32e-20,43;CL:0000221,5.31e-20,44;CL:0000133,5.31e-20,44;CL:0002321,2.03e-10,70;CL:0002612,1.70e-07,3;CL:0002614,1.97e-07,3;CL:0002610,4.67e-07,3;CL:0002613,6.19e-07,3;CL:0000120,7.12e-07,3;CL:0000723,9.35e-07,91;CL:0000048,9.35e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.21e-36!73;UBERON:0005743!3.21e-36!73;UBERON:0000073!1.09e-35!75;UBERON:0001016!1.09e-35!75;UBERON:0001049!7.04e-30!52;UBERON:0005068!7.04e-30!52;UBERON:0006241!7.04e-30!52;UBERON:0007135!7.04e-30!52;UBERON:0002020!2.07e-28!34;UBERON:0000955!1.23e-27!50;UBERON:0006238!1.23e-27!50;UBERON:0002346!1.55e-27!71;UBERON:0003075!1.55e-27!71;UBERON:0007284!1.55e-27!71;UBERON:0004121!2.06e-27!102;UBERON:0000924!2.06e-27!102;UBERON:0006601!2.06e-27!102;UBERON:0002616!7.64e-27!49;UBERON:0000033!8.57e-27!63;UBERON:0003056!1.18e-23!49;UBERON:0002791!3.27e-23!29;UBERON:0003528!3.27e-23!29;UBERON:0001893!3.27e-23!29;UBERON:0003080!1.08e-22!40;UBERON:0002780!5.81e-22!39;UBERON:0001890!5.81e-22!39;UBERON:0006240!5.81e-22!39;UBERON:0000956!3.97e-16!21;UBERON:0001869!3.97e-16!21;UBERON:0000203!3.97e-16!21;UBERON:0007811!8.99e-15!86;UBERON:0002619!4.14e-13!17;UBERON:0000153!4.38e-12!94;UBERON:0002021!1.03e-10!10;UBERON:0000411!1.03e-10!10;UBERON:0001950!1.03e-10!10;UBERON:0002420!3.14e-08!8;UBERON:0007245!3.14e-08!8;UBERON:0010009!3.14e-08!8;UBERON:0010011!3.14e-08!8;UBERON:0000454!3.14e-08!8;UBERON:0003076!1.47e-07!12;UBERON:0003057!1.47e-07!12;UBERON:0002240!5.59e-07!6;UBERON:0005174!5.59e-07!6;UBERON:0001137!5.59e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.44e-45,73;UBERON:0002020,5.24e-44,34;UBERON:0000073,7.85e-44,54;UBERON:0001016,1.22e-43,75;UBERON:0001049,8.00e-40,52;UBERON:0005068,8.00e-40,52;UBERON:0006241,8.00e-40,52;UBERON:0007135,8.00e-40,52;UBERON:0003528,1.04e-33,29;UBERON:0002791,1.04e-33,29;UBERON:0001893,1.04e-33,29;UBERON:0002346,9.45e-33,64;UBERON:0003075,9.45e-33,64;UBERON:0007284,9.45e-33,64;UBERON:0004121,1.47e-32,95;UBERON:0000924,1.47e-32,95;UBERON:0006601,1.47e-32,95;UBERON:0000955,1.31e-30,47;UBERON:0006238,1.31e-30,47;UBERON:0002616,3.37e-29,46;UBERON:0010371,1.09e-27,73;UBERON:0003080,4.13e-27,40;UBERON:0002780,9.09e-26,39;UBERON:0001890,9.09e-26,39;UBERON:0006240,9.09e-26,39;UBERON:0000956,2.45e-22,21;UBERON:0001869,2.45e-22,21;UBERON:0000203,2.45e-22,21;UBERON:0003056,5.99e-21,49;UBERON:0002021,1.04e-20,10;UBERON:0000411,1.04e-20,10;UBERON:0001950,1.04e-20,10;UBERON:0010314,2.99e-20,92;UBERON:0002619,9.81e-19,17;UBERON:0000025,1.02e-13,114;UBERON:0002240,6.58e-13,6;UBERON:0005174,6.58e-13,6;UBERON:0001137,6.58e-13,6;UBERON:0003076,8.46e-13,12;UBERON:0003057,8.46e-13,12;UBERON:0002420,2.22e-12,8;UBERON:0007245,2.22e-12,8;UBERON:0010009,2.22e-12,8;UBERON:0010011,2.22e-12,8;UBERON:0000454,2.22e-12,8;UBERON:0004111,2.75e-12,122;UBERON:0001948,1.27e-11,5;UBERON:0002315,1.27e-11,5;UBERON:0011216,3.02e-11,194;UBERON:0002950,9.45e-09,4;UBERON:0001891,9.45e-09,4;UBERON:0009616,9.45e-09,4;UBERON:0010286,9.45e-09,4;UBERON:0002257,1.70e-07,3;UBERON:0002038,1.97e-07,3;UBERON:0009663,1.97e-07,3;UBERON:0009661,1.97e-07,3;UBERON:0000125,1.97e-07,3;UBERON:0002308,1.97e-07,3;UBERON:0004684,4.67e-07,3;UBERON:0002275,4.67e-07,3;UBERON:0000483,7.83e-07,174;UBERON:0000369,8.81e-07,5;UBERON:0002435,8.81e-07,5;UBERON:0000204,8.81e-07,5;UBERON:0010082,8.81e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,2.42779753031517,6.87688273053643,1.90149421051854,0,0,0,0,0,1.19840044207362,0.768436610643109,1.45165457231869,3.91517221161903,0.630974884054146,6.28432165688368,5.30084498283872,0.857435594504678,1.91690942036473,2.75765635983006,3.30347642998166,2.80912143787413,4.30098293117482,2.37395317914349,4.48289453651807,3.12548022334056,4.18774498502071,6.19038871034848,3.51435969886663,4.71405736757868,7.83044244395066,2.98239113320481,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,3.97948742945565,0.255457055208591,0,0,0,1.19832511523858,0.915001205637253,2.01046963380583,2.43354048269187,1.27857728665165,2.0778804455956,0.973447578406546,0,0,0,0.420883711772948,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.92614151141356,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,1.28440471990234,1.75817529888305,0,0,0,0.780877488593277,1.07711698866399,0,0.222798674082394,0,0,0,0.395287777946524,1.28528526568723,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,6.21227026878773,5.9842280745933,8.59343270159095,3.43706364687375,5.48066015816514,2.2661816921691,4.05013500139084,5.85417564191487,2.71885445390523,2.5888015587591,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.962757628775446,0,0.50695859978048,0.754505365544305,0.280924522409647,0.256100609619477,0.34461281373368,0,0.115884325944855,0.38581844092741,1.64834360321323,0.441596760403192,0,0.177475806159338,0.715308569841963,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.464810523557898,0,0.749431733813838,0.233931608445408,0.429742108096597,0.57386499620653,0,0 | |||
|short_description=p@chr12:73317782..73317817,- | |||
}} |
Revision as of 23:07, 12 September 2013
Short description: | p@chr12:73317782..73317817, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:73317782..73317817, - |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.68e-37 | 23 |
neuroblast (sensu Vertebrata) | 7.68e-37 | 23 |
neuron | 3.01e-26 | 33 |
neuronal stem cell | 3.01e-26 | 33 |
neuroblast | 3.01e-26 | 33 |
electrically signaling cell | 3.01e-26 | 33 |
electrically responsive cell | 2.54e-21 | 39 |
electrically active cell | 2.54e-21 | 39 |
neural cell | 1.32e-20 | 43 |
ectodermal cell | 5.31e-20 | 44 |
neurectodermal cell | 5.31e-20 | 44 |
embryonic cell | 2.03e-10 | 70 |
neuron of the ventral spinal cord | 1.70e-07 | 3 |
neuron of the substantia nigra | 1.97e-07 | 3 |
raphe nuclei neuron | 4.67e-07 | 3 |
striatum neuron | 6.19e-07 | 3 |
granule cell | 7.12e-07 | 3 |
somatic stem cell | 9.35e-07 | 91 |
multi fate stem cell | 9.35e-07 | 91 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.