FFCP PHASE1:Mm9::chrX:93650850..93650861,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15203|HGNC=|MCL_coexpression_id=12|UniProt=Q9Z0Z4|association_with_transcript=75bp_to_NM_001159628,NM_010417,uc009tuk.2,uc009tul.2_5end|description=CAGE_peak_7_at_Heph_5end|id=chrX:93650850..93650861,+|ontology_enrichment_celltype=CL:0002563!2.68e-11!9;CL:0002251!2.68e-11!9;CL:0000239!7.60e-09!6;CL:0000677!7.60e-09!6;CL:0000212!7.60e-09!6;CL:0000584!7.60e-09!6;CL:0000075!2.13e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,7.75e-16,6;CL:0000677,7.75e-16,6;CL:0000584,7.75e-16,6;CL:0000075,1.78e-13,7;CL:0002563,2.51e-10,9;CL:0002251,2.51e-10,9;CL:0000682,1.51e-08,3;CL:0000066,3.76e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.30e-23!43;UBERON:0005409!4.19e-20!59;UBERON:0000344!2.11e-18!15;UBERON:0001242!3.38e-16!13;UBERON:0000060!3.38e-16!13;UBERON:0001262!3.38e-16!13;UBERON:0004786!3.38e-16!13;UBERON:0004923!1.17e-12!24;UBERON:0003350!2.68e-11!9;UBERON:0004808!2.68e-11!9;UBERON:0001277!2.68e-11!9;UBERON:0000485!8.18e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.58e-49,31;UBERON:0005409,1.84e-33,47;UBERON:0000344,3.21e-23,15;UBERON:0001242,4.54e-19,13;UBERON:0001262,4.54e-19,13;UBERON:0004786,4.54e-19,13;UBERON:0004923,7.41e-16,24;UBERON:0001007,2.75e-12,116;UBERON:0001555,2.75e-12,116;UBERON:0007026,2.75e-12,116;UBERON:0004119,5.63e-12,118;UBERON:0000925,5.63e-12,118;UBERON:0006595,5.63e-12,118;UBERON:0002108,7.40e-11,4;UBERON:0004921,2.05e-10,114;UBERON:0003350,2.51e-10,9;UBERON:0004808,2.51e-10,9;UBERON:0001277,2.51e-10,9;UBERON:0000331,2.28e-08,3;UBERON:0002116,2.28e-08,3;UBERON:0001204,2.28e-08,3;UBERON:0001168,2.28e-08,3;UBERON:0000485,2.55e-08,11|phase1_expression=0,11.1672130444596,7.73498706962211,13.6108895088074,12.5223932486587,1.34303417529512,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07971206614945,4.35877634027623,9.18771142584032,7.32295393470427,6.24866574789078,8.7410772949932,6.80481350351813,5.76499327703792,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0.125666591329675,1.97755974187499,0,0,0,0,0,7.45567044872489,0,0,8.43008282188352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1118275067686,7.1401652999157,0,0,0.515469845288373,1.61346819698674,3.7804267453628,4.75564065281398,8.54152310780121,9.55253937399263,9.29940272560997,7.36138946552258,8.38345574612217,7.19055526923377,9.94235029423593,12.1476176685164,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.492422699235184,8.74442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.87345025498471,0,0.0826534557253359,0,8.03612834409116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.468207537349412,0.576226371643824,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0.147198920134397,1.02860775715625,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0.220591419119515,0|short_description=p7@Heph}} | ||
|EntrezGene=15203 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q9Z0Z4 | |||
|association_with_transcript=75bp_to_NM_001159628,NM_010417,uc009tuk.2,uc009tul.2_5end | |||
|description=CAGE_peak_7_at_Heph_5end | |||
|id=chrX:93650850..93650861,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.68e-11!9;CL:0002251!2.68e-11!9;CL:0000239!7.60e-09!6;CL:0000677!7.60e-09!6;CL:0000212!7.60e-09!6;CL:0000584!7.60e-09!6;CL:0000075!2.13e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.75e-16,6;CL:0000677,7.75e-16,6;CL:0000584,7.75e-16,6;CL:0000075,1.78e-13,7;CL:0002563,2.51e-10,9;CL:0002251,2.51e-10,9;CL:0000682,1.51e-08,3;CL:0000066,3.76e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.30e-23!43;UBERON:0005409!4.19e-20!59;UBERON:0000344!2.11e-18!15;UBERON:0001242!3.38e-16!13;UBERON:0000060!3.38e-16!13;UBERON:0001262!3.38e-16!13;UBERON:0004786!3.38e-16!13;UBERON:0004923!1.17e-12!24;UBERON:0003350!2.68e-11!9;UBERON:0004808!2.68e-11!9;UBERON:0001277!2.68e-11!9;UBERON:0000485!8.18e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.58e-49,31;UBERON:0005409,1.84e-33,47;UBERON:0000344,3.21e-23,15;UBERON:0001242,4.54e-19,13;UBERON:0001262,4.54e-19,13;UBERON:0004786,4.54e-19,13;UBERON:0004923,7.41e-16,24;UBERON:0001007,2.75e-12,116;UBERON:0001555,2.75e-12,116;UBERON:0007026,2.75e-12,116;UBERON:0004119,5.63e-12,118;UBERON:0000925,5.63e-12,118;UBERON:0006595,5.63e-12,118;UBERON:0002108,7.40e-11,4;UBERON:0004921,2.05e-10,114;UBERON:0003350,2.51e-10,9;UBERON:0004808,2.51e-10,9;UBERON:0001277,2.51e-10,9;UBERON:0000331,2.28e-08,3;UBERON:0002116,2.28e-08,3;UBERON:0001204,2.28e-08,3;UBERON:0001168,2.28e-08,3;UBERON:0000485,2.55e-08,11 | |||
|phase1_expression=0,11.1672130444596,7.73498706962211,13.6108895088074,12.5223932486587,1.34303417529512,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07971206614945,4.35877634027623,9.18771142584032,7.32295393470427,6.24866574789078,8.7410772949932,6.80481350351813,5.76499327703792,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0.125666591329675,1.97755974187499,0,0,0,0,0,7.45567044872489,0,0,8.43008282188352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1118275067686,7.1401652999157,0,0,0.515469845288373,1.61346819698674,3.7804267453628,4.75564065281398,8.54152310780121,9.55253937399263,9.29940272560997,7.36138946552258,8.38345574612217,7.19055526923377,9.94235029423593,12.1476176685164,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.492422699235184,8.74442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.87345025498471,0,0.0826534557253359,0,8.03612834409116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.468207537349412,0.576226371643824,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0.147198920134397,1.02860775715625,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p7@Heph | |||
}} |
Revision as of 20:17, 14 September 2013
Short description: | p7@Heph |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Heph_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 75bp_to_NM_001159628, NM_010417, uc009tuk.2, uc009tul.2_5end |
EntrezGene: | Heph |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.75e-16 | 6 |
gut absorptive cell | 7.75e-16 | 6 |
enterocyte | 7.75e-16 | 6 |
columnar/cuboidal epithelial cell | 1.78e-13 | 7 |
intestinal epithelial cell | 2.51e-10 | 9 |
epithelial cell of alimentary canal | 2.51e-10 | 9 |
M cell of gut | 1.51e-08 | 3 |
epithelial cell | 3.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.58e-49 | 31 |
gastrointestinal system | 1.84e-33 | 47 |
mucosa | 3.21e-23 | 15 |
intestinal mucosa | 4.54e-19 | 13 |
wall of intestine | 4.54e-19 | 13 |
gastrointestinal system mucosa | 4.54e-19 | 13 |
organ component layer | 7.41e-16 | 24 |
digestive system | 2.75e-12 | 116 |
digestive tract | 2.75e-12 | 116 |
primitive gut | 2.75e-12 | 116 |
endoderm-derived structure | 5.63e-12 | 118 |
endoderm | 5.63e-12 | 118 |
presumptive endoderm | 5.63e-12 | 118 |
small intestine | 7.40e-11 | 4 |
subdivision of digestive tract | 2.05e-10 | 114 |
epithelium of mucosa | 2.51e-10 | 9 |
gastrointestinal system epithelium | 2.51e-10 | 9 |
intestinal epithelium | 2.51e-10 | 9 |
ileal mucosa | 2.28e-08 | 3 |
ileum | 2.28e-08 | 3 |
mucosa of small intestine | 2.28e-08 | 3 |
wall of small intestine | 2.28e-08 | 3 |
simple columnar epithelium | 2.55e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.