FFCP PHASE1:Mm9::chr4:128365970..128365994,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54383|HGNC=|MCL_coexpression_id=184|UniProt=Q9QWH1|association_with_transcript=0bp_to_ENSMUST00000148723,NM_018774,uc008uvg.1,uc008uvh.2_5end|description=CAGE_peak_5_at_Phc2_5end|id=chr4:128365970..128365994,+|ontology_enrichment_celltype=CL:0000117!6.32e-15!23;CL:0000337!6.32e-15!23;CL:0000540!8.11e-14!33;CL:0000047!8.11e-14!33;CL:0000031!8.11e-14!33;CL:0000404!8.11e-14!33;CL:0000393!6.01e-10!39;CL:0000211!6.01e-10!39;CL:0000221!6.71e-09!44;CL:0000133!6.71e-09!44;CL:0002319!8.71e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-25,23;CL:0000337,3.28e-25,23;CL:0000540,1.11e-18,33;CL:0000047,1.11e-18,33;CL:0000031,1.11e-18,33;CL:0000404,1.11e-18,33;CL:0000393,3.46e-15,39;CL:0000211,3.46e-15,39;CL:0002319,2.11e-13,43;CL:0000221,5.23e-13,44;CL:0000133,5.23e-13,44;CL:0002609,1.51e-10,6;CL:0002608,3.16e-09,3;CL:0002613,8.71e-09,3;CL:0002612,1.96e-08,3;CL:0002321,9.46e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.93e-17!73;UBERON:0005743!5.93e-17!73;UBERON:0000073!5.95e-16!75;UBERON:0001016!5.95e-16!75;UBERON:0001049!7.07e-16!52;UBERON:0005068!7.07e-16!52;UBERON:0006241!7.07e-16!52;UBERON:0007135!7.07e-16!52;UBERON:0002020!2.00e-14!34;UBERON:0002346!1.90e-13!71;UBERON:0003075!1.90e-13!71;UBERON:0007284!1.90e-13!71;UBERON:0000955!4.32e-13!50;UBERON:0006238!4.32e-13!50;UBERON:0003080!1.17e-12!40;UBERON:0002616!2.16e-12!49;UBERON:0002780!5.34e-12!39;UBERON:0001890!5.34e-12!39;UBERON:0006240!5.34e-12!39;UBERON:0004121!1.59e-11!102;UBERON:0000924!1.59e-11!102;UBERON:0006601!1.59e-11!102;UBERON:0002791!3.26e-11!29;UBERON:0003528!3.26e-11!29;UBERON:0001893!3.26e-11!29;UBERON:0003056!1.60e-09!49;UBERON:0000033!2.89e-09!63;UBERON:0002420!2.58e-07!8;UBERON:0007245!2.58e-07!8;UBERON:0010009!2.58e-07!8;UBERON:0010011!2.58e-07!8;UBERON:0000454!2.58e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.42e-18,52;UBERON:0005068,1.42e-18,52;UBERON:0006241,1.42e-18,52;UBERON:0007135,1.42e-18,52;UBERON:0002020,3.94e-18,34;UBERON:0001017,6.29e-18,73;UBERON:0000073,1.08e-17,54;UBERON:0001016,2.73e-17,75;UBERON:0002346,1.11e-15,64;UBERON:0003075,1.11e-15,64;UBERON:0007284,1.11e-15,64;UBERON:0000955,4.96e-15,47;UBERON:0006238,4.96e-15,47;UBERON:0002420,6.03e-15,8;UBERON:0007245,6.03e-15,8;UBERON:0010009,6.03e-15,8;UBERON:0010011,6.03e-15,8;UBERON:0000454,6.03e-15,8;UBERON:0003080,1.84e-14,40;UBERON:0000369,1.25e-13,5;UBERON:0002435,1.25e-13,5;UBERON:0000204,1.25e-13,5;UBERON:0010082,1.25e-13,5;UBERON:0002616,1.36e-13,46;UBERON:0002780,4.24e-13,39;UBERON:0001890,4.24e-13,39;UBERON:0006240,4.24e-13,39;UBERON:0010371,4.31e-13,73;UBERON:0004121,2.12e-12,95;UBERON:0000924,2.12e-12,95;UBERON:0006601,2.12e-12,95;UBERON:0003528,3.09e-12,29;UBERON:0002791,3.09e-12,29;UBERON:0001893,3.09e-12,29;UBERON:0003056,4.38e-11,49;UBERON:0010314,2.65e-09,92;UBERON:0001948,1.61e-08,5;UBERON:0002315,1.61e-08,5;UBERON:0002257,1.96e-08,3;UBERON:0002240,4.31e-07,6;UBERON:0005174,4.31e-07,6;UBERON:0001137,4.31e-07,6|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0.336093799142464,0,0,0,3.43937983461316,3.70293685490423,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,1.05162480675691,0.285650984403804,1.98781686856452,5.63457676388789,8.53024692062304,3.67687514644008,0,0.383062014255563,0.46081959976873,3.95658863190582,1.82975287204819,4.16730696445408,1.11673199600552,0.56276261003168,1.06958773443767,2.06240009831567,1.85083185038834,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0.127070227073065,1.3481157546434,2.28750301409313,7.53926112677186,0.695297280769106,0.767146371990992,1.24672826735736,1.1356888414743,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,2.6755199218614,0,0.264450566663544,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.449724224769707,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0.642202359951168,1.05490517932983,0,0,0.315508219416257,1.56175497718655,0.861693590931196,0,0,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0,0,0,0,0,0,0.906970670894253,0,0,0,0,0,0,0,0,0,2.38307724027652,0,0.129358683782755,0,0.709360934569094,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0.276399947608848,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0,0,0,0.129614973291793,0,0,0.598066184175915,0.330916980914195,0,0.258319646955462,0,0.469428954583016,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0,0.201932899896295,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,1.03787347584177,2.39414924040619,1.70733605754134,0.972426868273176,0.209613162627982,0.735374033800057,0.666740183404846,0.618105171716683,1.60459604795908,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.448176066834085,0.689225627467359,1.42888107384922,0.695305955669133,0.77163688185482,1.23625770240992,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.564656282491984,0.338458431566706,0.548783918618318,0.526139422875686,0.679020569229309,1.12228454331548,0.593175090620871,0.591026894253381,1.22769312950907,0.77468420592983,1.15743966588685,1.24905288968973,0.233931608445408,0.859484216193193,0.382576664137687,0,0|short_description=p5@Phc2}} | ||
|EntrezGene=54383 | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|UniProt=Q9QWH1 | |||
|association_with_transcript=0bp_to_ENSMUST00000148723,NM_018774,uc008uvg.1,uc008uvh.2_5end | |||
|description=CAGE_peak_5_at_Phc2_5end | |||
|id=chr4:128365970..128365994,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.32e-15!23;CL:0000337!6.32e-15!23;CL:0000540!8.11e-14!33;CL:0000047!8.11e-14!33;CL:0000031!8.11e-14!33;CL:0000404!8.11e-14!33;CL:0000393!6.01e-10!39;CL:0000211!6.01e-10!39;CL:0000221!6.71e-09!44;CL:0000133!6.71e-09!44;CL:0002319!8.71e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-25,23;CL:0000337,3.28e-25,23;CL:0000540,1.11e-18,33;CL:0000047,1.11e-18,33;CL:0000031,1.11e-18,33;CL:0000404,1.11e-18,33;CL:0000393,3.46e-15,39;CL:0000211,3.46e-15,39;CL:0002319,2.11e-13,43;CL:0000221,5.23e-13,44;CL:0000133,5.23e-13,44;CL:0002609,1.51e-10,6;CL:0002608,3.16e-09,3;CL:0002613,8.71e-09,3;CL:0002612,1.96e-08,3;CL:0002321,9.46e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.93e-17!73;UBERON:0005743!5.93e-17!73;UBERON:0000073!5.95e-16!75;UBERON:0001016!5.95e-16!75;UBERON:0001049!7.07e-16!52;UBERON:0005068!7.07e-16!52;UBERON:0006241!7.07e-16!52;UBERON:0007135!7.07e-16!52;UBERON:0002020!2.00e-14!34;UBERON:0002346!1.90e-13!71;UBERON:0003075!1.90e-13!71;UBERON:0007284!1.90e-13!71;UBERON:0000955!4.32e-13!50;UBERON:0006238!4.32e-13!50;UBERON:0003080!1.17e-12!40;UBERON:0002616!2.16e-12!49;UBERON:0002780!5.34e-12!39;UBERON:0001890!5.34e-12!39;UBERON:0006240!5.34e-12!39;UBERON:0004121!1.59e-11!102;UBERON:0000924!1.59e-11!102;UBERON:0006601!1.59e-11!102;UBERON:0002791!3.26e-11!29;UBERON:0003528!3.26e-11!29;UBERON:0001893!3.26e-11!29;UBERON:0003056!1.60e-09!49;UBERON:0000033!2.89e-09!63;UBERON:0002420!2.58e-07!8;UBERON:0007245!2.58e-07!8;UBERON:0010009!2.58e-07!8;UBERON:0010011!2.58e-07!8;UBERON:0000454!2.58e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.42e-18,52;UBERON:0005068,1.42e-18,52;UBERON:0006241,1.42e-18,52;UBERON:0007135,1.42e-18,52;UBERON:0002020,3.94e-18,34;UBERON:0001017,6.29e-18,73;UBERON:0000073,1.08e-17,54;UBERON:0001016,2.73e-17,75;UBERON:0002346,1.11e-15,64;UBERON:0003075,1.11e-15,64;UBERON:0007284,1.11e-15,64;UBERON:0000955,4.96e-15,47;UBERON:0006238,4.96e-15,47;UBERON:0002420,6.03e-15,8;UBERON:0007245,6.03e-15,8;UBERON:0010009,6.03e-15,8;UBERON:0010011,6.03e-15,8;UBERON:0000454,6.03e-15,8;UBERON:0003080,1.84e-14,40;UBERON:0000369,1.25e-13,5;UBERON:0002435,1.25e-13,5;UBERON:0000204,1.25e-13,5;UBERON:0010082,1.25e-13,5;UBERON:0002616,1.36e-13,46;UBERON:0002780,4.24e-13,39;UBERON:0001890,4.24e-13,39;UBERON:0006240,4.24e-13,39;UBERON:0010371,4.31e-13,73;UBERON:0004121,2.12e-12,95;UBERON:0000924,2.12e-12,95;UBERON:0006601,2.12e-12,95;UBERON:0003528,3.09e-12,29;UBERON:0002791,3.09e-12,29;UBERON:0001893,3.09e-12,29;UBERON:0003056,4.38e-11,49;UBERON:0010314,2.65e-09,92;UBERON:0001948,1.61e-08,5;UBERON:0002315,1.61e-08,5;UBERON:0002257,1.96e-08,3;UBERON:0002240,4.31e-07,6;UBERON:0005174,4.31e-07,6;UBERON:0001137,4.31e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0.336093799142464,0,0,0,3.43937983461316,3.70293685490423,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,1.05162480675691,0.285650984403804,1.98781686856452,5.63457676388789,8.53024692062304,3.67687514644008,0,0.383062014255563,0.46081959976873,3.95658863190582,1.82975287204819,4.16730696445408,1.11673199600552,0.56276261003168,1.06958773443767,2.06240009831567,1.85083185038834,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0.127070227073065,1.3481157546434,2.28750301409313,7.53926112677186,0.695297280769106,0.767146371990992,1.24672826735736,1.1356888414743,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,2.6755199218614,0,0.264450566663544,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.449724224769707,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0.642202359951168,1.05490517932983,0,0,0.315508219416257,1.56175497718655,0.861693590931196,0,0,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0,0,0,0,0,0,0.906970670894253,0,0,0,0,0,0,0,0,0,2.38307724027652,0,0.129358683782755,0,0.709360934569094,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0.276399947608848,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0,0,0,0.129614973291793,0,0,0.598066184175915,0.330916980914195,0,0.258319646955462,0,0.469428954583016,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0,0.201932899896295,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,1.03787347584177,2.39414924040619,1.70733605754134,0.972426868273176,0.209613162627982,0.735374033800057,0.666740183404846,0.618105171716683,1.60459604795908,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.448176066834085,0.689225627467359,1.42888107384922,0.695305955669133,0.77163688185482,1.23625770240992,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.564656282491984,0.338458431566706,0.548783918618318,0.526139422875686,0.679020569229309,1.12228454331548,0.593175090620871,0.591026894253381,1.22769312950907,0.77468420592983,1.15743966588685,1.24905288968973,0.233931608445408,0.859484216193193,0.382576664137687,0,0 | |||
|short_description=p5@Phc2 | |||
}} |
Revision as of 03:49, 14 September 2013
Short description: | p5@Phc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Phc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | 0bp_to_ENSMUST00000148723, NM_018774, uc008uvg.1, uc008uvh.2_5end |
EntrezGene: | Phc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.28e-25 | 23 |
neuroblast (sensu Vertebrata) | 3.28e-25 | 23 |
neuron | 1.11e-18 | 33 |
neuronal stem cell | 1.11e-18 | 33 |
neuroblast | 1.11e-18 | 33 |
electrically signaling cell | 1.11e-18 | 33 |
electrically responsive cell | 3.46e-15 | 39 |
electrically active cell | 3.46e-15 | 39 |
neural cell | 2.11e-13 | 43 |
ectodermal cell | 5.23e-13 | 44 |
neurectodermal cell | 5.23e-13 | 44 |
neuron of cerebral cortex | 1.51e-10 | 6 |
hippocampal neuron | 3.16e-09 | 3 |
striatum neuron | 8.71e-09 | 3 |
neuron of the ventral spinal cord | 1.96e-08 | 3 |
embryonic cell | 9.46e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.