FFCP PHASE1:Mm9::chr11:101536779..101536810,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:101536779..101536810,-|id=chr11:101536779..101536810,-|ontology_enrichment_celltype=CL:0000239!2.72e-14!6;CL:0000677!2.72e-14!6;CL:0000212!2.72e-14!6;CL:0000584!2.72e-14!6;CL:0000075!3.35e-12!7;CL:0000066!2.03e-11!25;CL:0000473!3.32e-10!3;CL:0000627!3.32e-10!3;CL:0000682!3.32e-10!3;CL:0002563!2.07e-09!9;CL:0002251!2.07e-09!9;CL:0000223!2.68e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,4.28e-34,6;CL:0000677,4.28e-34,6;CL:0000584,4.28e-34,6;CL:0000075,2.51e-29,7;CL:0002563,5.86e-23,9;CL:0002251,5.86e-23,9;CL:0002076,5.23e-14,15;CL:0000066,6.45e-13,25;CL:0000223,1.25e-10,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.81e-25!15;UBERON:0001242!8.39e-20!13;UBERON:0000060!8.39e-20!13;UBERON:0001262!8.39e-20!13;UBERON:0004786!8.39e-20!13;UBERON:0004923!8.81e-15!24;UBERON:0000331!1.20e-10!3;UBERON:0002116!1.20e-10!3;UBERON:0001204!1.20e-10!3;UBERON:0001168!1.20e-10!3;UBERON:0000160!1.73e-10!43;UBERON:0003350!2.07e-09!9;UBERON:0004808!2.07e-09!9;UBERON:0001277!2.07e-09!9;UBERON:0000485!1.25e-07!11;UBERON:0001962!4.94e-07!2;UBERON:0001961!4.94e-07!2;UBERON:0001744!4.94e-07!2;UBERON:0005409!6.30e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.66e-24,13;UBERON:0001262,1.66e-24,13;UBERON:0004786,1.66e-24,13;UBERON:0003350,5.86e-23,9;UBERON:0004808,5.86e-23,9;UBERON:0001277,5.86e-23,9;UBERON:0000344,2.65e-21,15;UBERON:0000485,6.75e-19,11;UBERON:0000160,8.93e-15,31;UBERON:0004923,1.82e-13,24;UBERON:0005409,8.06e-10,47|phase1_expression=0,2.44282785347553,4.54999239389536,10.2837831844322,11.0197060588196,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,1.14846392823004,0.430761996159075,0.430942465371778,0.760093677825496,1.76421090831952,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,1.08069024937347,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:101536779..101536810,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:101536779..101536810,- | |||
|id=chr11:101536779..101536810,- | |||
|ontology_enrichment_celltype=CL:0000239!2.72e-14!6;CL:0000677!2.72e-14!6;CL:0000212!2.72e-14!6;CL:0000584!2.72e-14!6;CL:0000075!3.35e-12!7;CL:0000066!2.03e-11!25;CL:0000473!3.32e-10!3;CL:0000627!3.32e-10!3;CL:0000682!3.32e-10!3;CL:0002563!2.07e-09!9;CL:0002251!2.07e-09!9;CL:0000223!2.68e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.28e-34,6;CL:0000677,4.28e-34,6;CL:0000584,4.28e-34,6;CL:0000075,2.51e-29,7;CL:0002563,5.86e-23,9;CL:0002251,5.86e-23,9;CL:0002076,5.23e-14,15;CL:0000066,6.45e-13,25;CL:0000223,1.25e-10,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.81e-25!15;UBERON:0001242!8.39e-20!13;UBERON:0000060!8.39e-20!13;UBERON:0001262!8.39e-20!13;UBERON:0004786!8.39e-20!13;UBERON:0004923!8.81e-15!24;UBERON:0000331!1.20e-10!3;UBERON:0002116!1.20e-10!3;UBERON:0001204!1.20e-10!3;UBERON:0001168!1.20e-10!3;UBERON:0000160!1.73e-10!43;UBERON:0003350!2.07e-09!9;UBERON:0004808!2.07e-09!9;UBERON:0001277!2.07e-09!9;UBERON:0000485!1.25e-07!11;UBERON:0001962!4.94e-07!2;UBERON:0001961!4.94e-07!2;UBERON:0001744!4.94e-07!2;UBERON:0005409!6.30e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.66e-24,13;UBERON:0001262,1.66e-24,13;UBERON:0004786,1.66e-24,13;UBERON:0003350,5.86e-23,9;UBERON:0004808,5.86e-23,9;UBERON:0001277,5.86e-23,9;UBERON:0000344,2.65e-21,15;UBERON:0000485,6.75e-19,11;UBERON:0000160,8.93e-15,31;UBERON:0004923,1.82e-13,24;UBERON:0005409,8.06e-10,47 | |||
|phase1_expression=0,2.44282785347553,4.54999239389536,10.2837831844322,11.0197060588196,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,1.14846392823004,0.430761996159075,0.430942465371778,0.760093677825496,1.76421090831952,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,1.08069024937347,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:101536779..101536810,- | |||
}} |
Revision as of 18:16, 12 September 2013
Short description: | p@chr11:101536779..101536810, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:101536779..101536810, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.28e-34 | 6 |
gut absorptive cell | 4.28e-34 | 6 |
enterocyte | 4.28e-34 | 6 |
columnar/cuboidal epithelial cell | 2.51e-29 | 7 |
intestinal epithelial cell | 5.86e-23 | 9 |
epithelial cell of alimentary canal | 5.86e-23 | 9 |
endo-epithelial cell | 5.23e-14 | 15 |
epithelial cell | 6.45e-13 | 25 |
endodermal cell | 1.25e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.66e-24 | 13 |
wall of intestine | 1.66e-24 | 13 |
gastrointestinal system mucosa | 1.66e-24 | 13 |
epithelium of mucosa | 5.86e-23 | 9 |
gastrointestinal system epithelium | 5.86e-23 | 9 |
intestinal epithelium | 5.86e-23 | 9 |
mucosa | 2.65e-21 | 15 |
simple columnar epithelium | 6.75e-19 | 11 |
intestine | 8.93e-15 | 31 |
organ component layer | 1.82e-13 | 24 |
gastrointestinal system | 8.06e-10 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.