FFCP PHASE1:Mm9::chr14:63875434..63875469,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:63875434..63875469,-|id=chr14:63875434..63875469,-|ontology_enrichment_celltype=CL:0002563!1.29e-09!9;CL:0002251!1.29e-09!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.20e-17,9;CL:0002251,1.20e-17,9;CL:0000066,1.32e-14,25;CL:0002250,2.16e-11,3;CL:0000682,5.94e-11,3;CL:0002076,3.11e-10,15;CL:0000223,8.34e-10,20;CL:0000239,7.94e-09,6;CL:0000677,7.94e-09,6;CL:0000584,7.94e-09,6;CL:0000075,1.41e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.35e-15!59;UBERON:0000160!7.89e-14!43;UBERON:0004119!1.41e-10!130;UBERON:0000925!1.41e-10!130;UBERON:0006595!1.41e-10!130;UBERON:0001007!1.95e-10!128;UBERON:0001555!1.95e-10!128;UBERON:0007026!1.95e-10!128;UBERON:0003350!1.29e-09!9;UBERON:0004808!1.29e-09!9;UBERON:0001277!1.29e-09!9;UBERON:0004921!2.38e-09!126;UBERON:0004185!2.38e-09!126;UBERON:0000344!4.18e-09!15;UBERON:0001242!2.13e-07!13;UBERON:0000060!2.13e-07!13;UBERON:0001262!2.13e-07!13;UBERON:0004786!2.13e-07!13;UBERON:0000485!2.48e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.59e-27,47;UBERON:0000160,1.82e-21,31;UBERON:0000344,9.74e-21,15;UBERON:0003350,1.20e-17,9;UBERON:0004808,1.20e-17,9;UBERON:0001277,1.20e-17,9;UBERON:0001242,1.18e-15,13;UBERON:0001262,1.18e-15,13;UBERON:0004786,1.18e-15,13;UBERON:0000485,2.80e-14,11;UBERON:0001007,2.24e-12,116;UBERON:0001555,2.24e-12,116;UBERON:0007026,2.24e-12,116;UBERON:0004923,2.64e-12,24;UBERON:0004119,4.32e-12,118;UBERON:0000925,4.32e-12,118;UBERON:0006595,4.32e-12,118;UBERON:0004921,3.53e-10,114;UBERON:0001962,2.45e-07,2;UBERON:0001961,2.45e-07,2;UBERON:0001744,2.45e-07,2;UBERON:0000945,5.95e-07,16;UBERON:0010039,5.95e-07,16|phase1_expression=0,1.74487703819681,1.36499771816861,0.60492842261366,0.500895729946347,2.85394762250213,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.37645568640302,2.8711598205751,2.15380998079537,2.15471232685889,0,0,0,0,0,0,4.33277429626912,1.82858109894342,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.741584903203122,0.433798070759735,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0.900310307305074,0.23674473558521,0.590292695242212,0.154267112887378,0.697601834251224,0.268273401399619,0.350296027101508,0.329119699826961,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,0,0,3.30418782983798,1.58670339998127,0.213288250535234,0,1.15980715189884,0.605050573870028,0.444756087689741,0.190225626112559,1.42358718463353,0.823494773620054,0.251335208800269,0.198956472041151,0,3.59527763461689,0.864552199498777,2.78797782556114,0,0,0,0.203651327845314,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0.505157755894224,0.717589654087649,0,0.739012760666419,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0.203319467126849,0.756037385752609,1.04544148007234,1.52853794622324,1.21377911746339,1.73572257023205,6.02038666563268,0,0,0,0.598066184175915,0.992750942742586,0.583353565032143,0.774958940866387,0.337912250981556,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0,0,0,0|short_description=p@chr14:63875434..63875469,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:63875434..63875469,- | |||
|id=chr14:63875434..63875469,- | |||
|ontology_enrichment_celltype=CL:0002563!1.29e-09!9;CL:0002251!1.29e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.20e-17,9;CL:0002251,1.20e-17,9;CL:0000066,1.32e-14,25;CL:0002250,2.16e-11,3;CL:0000682,5.94e-11,3;CL:0002076,3.11e-10,15;CL:0000223,8.34e-10,20;CL:0000239,7.94e-09,6;CL:0000677,7.94e-09,6;CL:0000584,7.94e-09,6;CL:0000075,1.41e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.35e-15!59;UBERON:0000160!7.89e-14!43;UBERON:0004119!1.41e-10!130;UBERON:0000925!1.41e-10!130;UBERON:0006595!1.41e-10!130;UBERON:0001007!1.95e-10!128;UBERON:0001555!1.95e-10!128;UBERON:0007026!1.95e-10!128;UBERON:0003350!1.29e-09!9;UBERON:0004808!1.29e-09!9;UBERON:0001277!1.29e-09!9;UBERON:0004921!2.38e-09!126;UBERON:0004185!2.38e-09!126;UBERON:0000344!4.18e-09!15;UBERON:0001242!2.13e-07!13;UBERON:0000060!2.13e-07!13;UBERON:0001262!2.13e-07!13;UBERON:0004786!2.13e-07!13;UBERON:0000485!2.48e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.59e-27,47;UBERON:0000160,1.82e-21,31;UBERON:0000344,9.74e-21,15;UBERON:0003350,1.20e-17,9;UBERON:0004808,1.20e-17,9;UBERON:0001277,1.20e-17,9;UBERON:0001242,1.18e-15,13;UBERON:0001262,1.18e-15,13;UBERON:0004786,1.18e-15,13;UBERON:0000485,2.80e-14,11;UBERON:0001007,2.24e-12,116;UBERON:0001555,2.24e-12,116;UBERON:0007026,2.24e-12,116;UBERON:0004923,2.64e-12,24;UBERON:0004119,4.32e-12,118;UBERON:0000925,4.32e-12,118;UBERON:0006595,4.32e-12,118;UBERON:0004921,3.53e-10,114;UBERON:0001962,2.45e-07,2;UBERON:0001961,2.45e-07,2;UBERON:0001744,2.45e-07,2;UBERON:0000945,5.95e-07,16;UBERON:0010039,5.95e-07,16 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,0.60492842261366,0.500895729946347,2.85394762250213,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.37645568640302,2.8711598205751,2.15380998079537,2.15471232685889,0,0,0,0,0,0,4.33277429626912,1.82858109894342,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.741584903203122,0.433798070759735,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0.900310307305074,0.23674473558521,0.590292695242212,0.154267112887378,0.697601834251224,0.268273401399619,0.350296027101508,0.329119699826961,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,0,0,3.30418782983798,1.58670339998127,0.213288250535234,0,1.15980715189884,0.605050573870028,0.444756087689741,0.190225626112559,1.42358718463353,0.823494773620054,0.251335208800269,0.198956472041151,0,3.59527763461689,0.864552199498777,2.78797782556114,0,0,0,0.203651327845314,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0.505157755894224,0.717589654087649,0,0.739012760666419,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0.203319467126849,0.756037385752609,1.04544148007234,1.52853794622324,1.21377911746339,1.73572257023205,6.02038666563268,0,0,0,0.598066184175915,0.992750942742586,0.583353565032143,0.774958940866387,0.337912250981556,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr14:63875434..63875469,- | |||
}} |
Revision as of 02:44, 13 September 2013
Short description: | p@chr14:63875434..63875469, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:63875434..63875469, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.20e-17 | 9 |
epithelial cell of alimentary canal | 1.20e-17 | 9 |
epithelial cell | 1.32e-14 | 25 |
intestinal crypt stem cell | 2.16e-11 | 3 |
M cell of gut | 5.94e-11 | 3 |
endo-epithelial cell | 3.11e-10 | 15 |
endodermal cell | 8.34e-10 | 20 |
brush border epithelial cell | 7.94e-09 | 6 |
gut absorptive cell | 7.94e-09 | 6 |
enterocyte | 7.94e-09 | 6 |
columnar/cuboidal epithelial cell | 1.41e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.59e-27 | 47 |
intestine | 1.82e-21 | 31 |
mucosa | 9.74e-21 | 15 |
epithelium of mucosa | 1.20e-17 | 9 |
gastrointestinal system epithelium | 1.20e-17 | 9 |
intestinal epithelium | 1.20e-17 | 9 |
intestinal mucosa | 1.18e-15 | 13 |
wall of intestine | 1.18e-15 | 13 |
gastrointestinal system mucosa | 1.18e-15 | 13 |
simple columnar epithelium | 2.80e-14 | 11 |
digestive system | 2.24e-12 | 116 |
digestive tract | 2.24e-12 | 116 |
primitive gut | 2.24e-12 | 116 |
organ component layer | 2.64e-12 | 24 |
endoderm-derived structure | 4.32e-12 | 118 |
endoderm | 4.32e-12 | 118 |
presumptive endoderm | 4.32e-12 | 118 |
subdivision of digestive tract | 3.53e-10 | 114 |
gut-associated lymphoid tissue | 2.45e-07 | 2 |
mucosa-associated lymphoid tissue | 2.45e-07 | 2 |
lymphoid tissue | 2.45e-07 | 2 |
stomach | 5.95e-07 | 16 |
food storage organ | 5.95e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.