FFCP PHASE1:Mm9::chr6:48361612..48361623,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=61|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:48361612..48361623,+|id=chr6:48361612..48361623,+|ontology_enrichment_celltype=CL:0000068!3.50e-07!3;CL:0002202!3.50e-07!3;CL:0000069!3.50e-07!3;CL:0002632!3.50e-07!3;CL:0002368!3.50e-07!3;CL:0000307!3.50e-07!3;CL:0000377!3.50e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,6.06e-20,3;CL:0002202,6.06e-20,3;CL:0000069,6.06e-20,3;CL:0002632,6.06e-20,3;CL:0002368,6.06e-20,3;CL:0000307,6.06e-20,3;CL:0000377,6.06e-20,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!3.50e-07!3;UBERON:0001005!3.50e-07!3;UBERON:0007196!3.50e-07!3;UBERON:0001558!3.50e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.06e-20,3;UBERON:0001005,6.06e-20,3;UBERON:0007196,6.06e-20,3;UBERON:0001558,6.06e-20,3;UBERON:0001153,9.51e-16,1;UBERON:0001045,9.51e-16,1;UBERON:0001155,1.53e-08,2;UBERON:0000059,1.53e-08,2;UBERON:0000160,3.92e-08,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.26679932737549,0.505524445014783,0,0,0,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0.444756087689741,0.951128130562796,0,0.494096864172033,3.51869292320377,6.36660710531683,4.28920991662064,0,0,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.269728692769641,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr6:48361612..48361623,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:48361612..48361623,+ | |||
|id=chr6:48361612..48361623,+ | |||
|ontology_enrichment_celltype=CL:0000068!3.50e-07!3;CL:0002202!3.50e-07!3;CL:0000069!3.50e-07!3;CL:0002632!3.50e-07!3;CL:0002368!3.50e-07!3;CL:0000307!3.50e-07!3;CL:0000377!3.50e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.06e-20,3;CL:0002202,6.06e-20,3;CL:0000069,6.06e-20,3;CL:0002632,6.06e-20,3;CL:0002368,6.06e-20,3;CL:0000307,6.06e-20,3;CL:0000377,6.06e-20,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!3.50e-07!3;UBERON:0001005!3.50e-07!3;UBERON:0007196!3.50e-07!3;UBERON:0001558!3.50e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.06e-20,3;UBERON:0001005,6.06e-20,3;UBERON:0007196,6.06e-20,3;UBERON:0001558,6.06e-20,3;UBERON:0001153,9.51e-16,1;UBERON:0001045,9.51e-16,1;UBERON:0001155,1.53e-08,2;UBERON:0000059,1.53e-08,2;UBERON:0000160,3.92e-08,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.26679932737549,0.505524445014783,0,0,0,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0.444756087689741,0.951128130562796,0,0.494096864172033,3.51869292320377,6.36660710531683,4.28920991662064,0,0,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.269728692769641,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr6:48361612..48361623,+ | |||
}} |
Revision as of 10:05, 14 September 2013
Short description: | p@chr6:48361612..48361623, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48361612..48361623, + |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.06e-20 | 3 |
epithelial cell of tracheobronchial tree | 6.06e-20 | 3 |
branched duct epithelial cell | 6.06e-20 | 3 |
epithelial cell of lower respiratory tract | 6.06e-20 | 3 |
respiratory epithelial cell | 6.06e-20 | 3 |
tracheal epithelial cell | 6.06e-20 | 3 |
tracheoblast | 6.06e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.06e-20 | 3 |
respiratory airway | 6.06e-20 | 3 |
tracheobronchial tree | 6.06e-20 | 3 |
lower respiratory tract | 6.06e-20 | 3 |
caecum | 9.51e-16 | 1 |
midgut | 9.51e-16 | 1 |
colon | 1.53e-08 | 2 |
large intestine | 1.53e-08 | 2 |
intestine | 3.92e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.