FFCP PHASE1:Mm9::chr7:20257138..20257177,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=309|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:20257138..20257177,-|id=chr7:20257138..20257177,-|ontology_enrichment_celltype=CL:0000239!1.32e-07!6;CL:0000677!1.32e-07!6;CL:0000212!1.32e-07!6;CL:0000584!1.32e-07!6|ontology_enrichment_celltype_v019_2=CL:0000066,8.67e-12,25;CL:0000239,1.21e-10,6;CL:0000677,1.21e-10,6;CL:0000584,1.21e-10,6;CL:0000075,4.58e-09,7;CL:0000223,1.59e-08,20;CL:0000473,5.08e-08,7;CL:0000682,6.88e-08,3;CL:0000182,7.96e-08,5;CL:0002563,5.90e-07,9;CL:0002251,5.90e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.73e-16!22;UBERON:0007499!3.73e-16!22;UBERON:0006925!3.73e-16!22;UBERON:0009497!3.73e-16!22;UBERON:0000015!3.73e-16!22;UBERON:0002423!3.73e-16!22;UBERON:0006235!3.73e-16!22;UBERON:0008835!3.73e-16!22;UBERON:0003894!3.73e-16!22;UBERON:0004161!3.73e-16!22;UBERON:0008836!3.73e-16!22;UBERON:0009854!3.75e-15!23;UBERON:0009856!3.75e-15!23;UBERON:0002365!5.75e-15!25;UBERON:0002330!5.75e-15!25;UBERON:0000160!8.01e-11!43;UBERON:0004119!4.61e-10!130;UBERON:0000925!4.61e-10!130;UBERON:0006595!4.61e-10!130;UBERON:0001007!6.95e-10!128;UBERON:0001555!6.95e-10!128;UBERON:0007026!6.95e-10!128;UBERON:0000344!3.63e-09!15;UBERON:0004921!8.12e-09!126;UBERON:0004185!8.12e-09!126;UBERON:0005409!1.24e-07!59;UBERON:0001242!2.00e-07!13;UBERON:0000060!2.00e-07!13;UBERON:0001262!2.00e-07!13;UBERON:0004786!2.00e-07!13;UBERON:0003929!3.44e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.37e-20,31;UBERON:0002107,1.07e-15,22;UBERON:0007499,1.07e-15,22;UBERON:0006925,1.07e-15,22;UBERON:0009497,1.07e-15,22;UBERON:0000015,1.07e-15,22;UBERON:0002423,1.07e-15,22;UBERON:0006235,1.07e-15,22;UBERON:0008835,1.07e-15,22;UBERON:0003894,1.07e-15,22;UBERON:0004161,1.07e-15,22;UBERON:0008836,1.07e-15,22;UBERON:0001007,3.48e-15,116;UBERON:0001555,3.48e-15,116;UBERON:0007026,3.48e-15,116;UBERON:0009854,6.85e-15,23;UBERON:0009856,6.85e-15,23;UBERON:0004119,8.28e-15,118;UBERON:0000925,8.28e-15,118;UBERON:0006595,8.28e-15,118;UBERON:0002365,1.80e-13,25;UBERON:0002330,1.80e-13,25;UBERON:0004921,3.68e-13,114;UBERON:0000344,6.57e-12,15;UBERON:0005409,1.12e-11,47;UBERON:0003929,2.62e-10,55;UBERON:0001242,1.08e-08,13;UBERON:0001262,1.08e-08,13;UBERON:0004786,1.08e-08,13;UBERON:0000490,6.50e-08,66;UBERON:0005911,2.14e-07,69;UBERON:0003350,5.90e-07,9;UBERON:0004808,5.90e-07,9;UBERON:0001277,5.90e-07,9;UBERON:0004923,8.20e-07,24|phase1_expression=0,2.09385244583617,9.09998478779072,6.95667686005709,22.5403078475856,0.671517087647559,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.83527424853736,4.01962374880514,2.58457197695445,1.29282739611533,0.190023419456374,0.504060259519861,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,1.3599426674155,2.15881276655127,1.94932925234301,3.58421509677868,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.988779870937496,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,4.49565963328025,0,0,0,0.403367049246685,0.667134131534611,3.61428689613862,2.37264530772256,8.56434564564857,6.78605063760728,2.78539060857611,5.26403035221624,0.898819408654221,1.08069024937347,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0.196558995113203,0,0.608580364165509,1.20588579876208,2.80088436959562,2.30156909960649,2.59416362840057,1.92192989231657,5.75072826109418,1.48856379067401,0.936113019343682,0.505157755894224,0.358794827043824,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.735374033800057,0,0.206035057238894,0,0,0.25347929989024,0,0.468207537349412,0.128050304809739,0.287177344778066,0,0.231768651889711,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0.220591419119515,0|short_description=p@chr7:20257138..20257177,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=309 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:20257138..20257177,- | |||
|id=chr7:20257138..20257177,- | |||
|ontology_enrichment_celltype=CL:0000239!1.32e-07!6;CL:0000677!1.32e-07!6;CL:0000212!1.32e-07!6;CL:0000584!1.32e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.67e-12,25;CL:0000239,1.21e-10,6;CL:0000677,1.21e-10,6;CL:0000584,1.21e-10,6;CL:0000075,4.58e-09,7;CL:0000223,1.59e-08,20;CL:0000473,5.08e-08,7;CL:0000682,6.88e-08,3;CL:0000182,7.96e-08,5;CL:0002563,5.90e-07,9;CL:0002251,5.90e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.73e-16!22;UBERON:0007499!3.73e-16!22;UBERON:0006925!3.73e-16!22;UBERON:0009497!3.73e-16!22;UBERON:0000015!3.73e-16!22;UBERON:0002423!3.73e-16!22;UBERON:0006235!3.73e-16!22;UBERON:0008835!3.73e-16!22;UBERON:0003894!3.73e-16!22;UBERON:0004161!3.73e-16!22;UBERON:0008836!3.73e-16!22;UBERON:0009854!3.75e-15!23;UBERON:0009856!3.75e-15!23;UBERON:0002365!5.75e-15!25;UBERON:0002330!5.75e-15!25;UBERON:0000160!8.01e-11!43;UBERON:0004119!4.61e-10!130;UBERON:0000925!4.61e-10!130;UBERON:0006595!4.61e-10!130;UBERON:0001007!6.95e-10!128;UBERON:0001555!6.95e-10!128;UBERON:0007026!6.95e-10!128;UBERON:0000344!3.63e-09!15;UBERON:0004921!8.12e-09!126;UBERON:0004185!8.12e-09!126;UBERON:0005409!1.24e-07!59;UBERON:0001242!2.00e-07!13;UBERON:0000060!2.00e-07!13;UBERON:0001262!2.00e-07!13;UBERON:0004786!2.00e-07!13;UBERON:0003929!3.44e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.37e-20,31;UBERON:0002107,1.07e-15,22;UBERON:0007499,1.07e-15,22;UBERON:0006925,1.07e-15,22;UBERON:0009497,1.07e-15,22;UBERON:0000015,1.07e-15,22;UBERON:0002423,1.07e-15,22;UBERON:0006235,1.07e-15,22;UBERON:0008835,1.07e-15,22;UBERON:0003894,1.07e-15,22;UBERON:0004161,1.07e-15,22;UBERON:0008836,1.07e-15,22;UBERON:0001007,3.48e-15,116;UBERON:0001555,3.48e-15,116;UBERON:0007026,3.48e-15,116;UBERON:0009854,6.85e-15,23;UBERON:0009856,6.85e-15,23;UBERON:0004119,8.28e-15,118;UBERON:0000925,8.28e-15,118;UBERON:0006595,8.28e-15,118;UBERON:0002365,1.80e-13,25;UBERON:0002330,1.80e-13,25;UBERON:0004921,3.68e-13,114;UBERON:0000344,6.57e-12,15;UBERON:0005409,1.12e-11,47;UBERON:0003929,2.62e-10,55;UBERON:0001242,1.08e-08,13;UBERON:0001262,1.08e-08,13;UBERON:0004786,1.08e-08,13;UBERON:0000490,6.50e-08,66;UBERON:0005911,2.14e-07,69;UBERON:0003350,5.90e-07,9;UBERON:0004808,5.90e-07,9;UBERON:0001277,5.90e-07,9;UBERON:0004923,8.20e-07,24 | |||
|phase1_expression=0,2.09385244583617,9.09998478779072,6.95667686005709,22.5403078475856,0.671517087647559,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.83527424853736,4.01962374880514,2.58457197695445,1.29282739611533,0.190023419456374,0.504060259519861,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,1.3599426674155,2.15881276655127,1.94932925234301,3.58421509677868,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.988779870937496,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,4.49565963328025,0,0,0,0.403367049246685,0.667134131534611,3.61428689613862,2.37264530772256,8.56434564564857,6.78605063760728,2.78539060857611,5.26403035221624,0.898819408654221,1.08069024937347,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0.196558995113203,0,0.608580364165509,1.20588579876208,2.80088436959562,2.30156909960649,2.59416362840057,1.92192989231657,5.75072826109418,1.48856379067401,0.936113019343682,0.505157755894224,0.358794827043824,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.735374033800057,0,0.206035057238894,0,0,0.25347929989024,0,0.468207537349412,0.128050304809739,0.287177344778066,0,0.231768651889711,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p@chr7:20257138..20257177,- | |||
}} |
Revision as of 12:43, 14 September 2013
Short description: | p@chr7:20257138..20257177, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20257138..20257177, - |
Coexpression cluster: | MCL_coexpression_mm9:309 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.67e-12 | 25 |
brush border epithelial cell | 1.21e-10 | 6 |
gut absorptive cell | 1.21e-10 | 6 |
enterocyte | 1.21e-10 | 6 |
columnar/cuboidal epithelial cell | 4.58e-09 | 7 |
endodermal cell | 1.59e-08 | 20 |
defensive cell | 5.08e-08 | 7 |
M cell of gut | 6.88e-08 | 3 |
hepatocyte | 7.96e-08 | 5 |
intestinal epithelial cell | 5.90e-07 | 9 |
epithelial cell of alimentary canal | 5.90e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.