FFCP PHASE1:Mm9::chr4:45861547..45861568,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74152|HGNC=|MCL_coexpression_id=61|UniProt=Q9DBN1|association_with_transcript=11bp_to_ENSMUST00000107783_5end|description=CAGE_peak_3_at_1300002K09Rik_5end|id=chr4:45861547..45861568,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,6.55e-12,3;CL:0002563,4.98e-10,9;CL:0002251,4.98e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.11e-19!43;UBERON:0005409!7.12e-15!59;UBERON:0000344!4.90e-13!15;UBERON:0001242!1.80e-10!13;UBERON:0000060!1.80e-10!13;UBERON:0001262!1.80e-10!13;UBERON:0004786!1.80e-10!13;UBERON:0004923!5.51e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.32e-32,31;UBERON:0005409,6.43e-26,47;UBERON:0000344,4.81e-18,15;UBERON:0001242,7.96e-13,13;UBERON:0001262,7.96e-13,13;UBERON:0004786,7.96e-13,13;UBERON:0001007,8.41e-11,116;UBERON:0001555,8.41e-11,116;UBERON:0007026,8.41e-11,116;UBERON:0004923,8.89e-11,24;UBERON:0004119,1.48e-10,118;UBERON:0000925,1.48e-10,118;UBERON:0006595,1.48e-10,118;UBERON:0003350,4.98e-10,9;UBERON:0004808,4.98e-10,9;UBERON:0001277,4.98e-10,9;UBERON:0002108,9.44e-09,4;UBERON:0004921,1.19e-08,114;UBERON:0000485,3.62e-08,11;UBERON:0001962,4.92e-08,2;UBERON:0001961,4.92e-08,2;UBERON:0001744,4.92e-08,2|phase1_expression=0,0,0,0.30246421130683,0,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.60586496747019,0,0.86152399231815,0,0.950117097281869,1.51218077855958,1.10865255327652,0,0,0,2.3108129580102,2.49351968037739,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.77320476793256,3.22693639397348,5.78182913996663,9.3210556795154,0.949058123089023,15.646400698781,12.5667604400135,17.3092130675801,15.5971269695296,0.898819408654221,2.37751854862164,0.796565093017469,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09181281873089,0,0,0,3.75883422546199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.655490552289177,0.320125762024346,0.34461281373368,0,0.231768651889711,0,0.412085900803307,0.588795680537589,0,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.592302255241736,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.394017929502254,0,0.464810523557898,0.771626443924566,0,1.63752125911786,0.859484216193193,0,0,0|short_description=p3@1300002K09Rik}} | ||
|EntrezGene=74152 | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|UniProt=Q9DBN1 | |||
|association_with_transcript=11bp_to_ENSMUST00000107783_5end | |||
|description=CAGE_peak_3_at_1300002K09Rik_5end | |||
|id=chr4:45861547..45861568,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,6.55e-12,3;CL:0002563,4.98e-10,9;CL:0002251,4.98e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.11e-19!43;UBERON:0005409!7.12e-15!59;UBERON:0000344!4.90e-13!15;UBERON:0001242!1.80e-10!13;UBERON:0000060!1.80e-10!13;UBERON:0001262!1.80e-10!13;UBERON:0004786!1.80e-10!13;UBERON:0004923!5.51e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.32e-32,31;UBERON:0005409,6.43e-26,47;UBERON:0000344,4.81e-18,15;UBERON:0001242,7.96e-13,13;UBERON:0001262,7.96e-13,13;UBERON:0004786,7.96e-13,13;UBERON:0001007,8.41e-11,116;UBERON:0001555,8.41e-11,116;UBERON:0007026,8.41e-11,116;UBERON:0004923,8.89e-11,24;UBERON:0004119,1.48e-10,118;UBERON:0000925,1.48e-10,118;UBERON:0006595,1.48e-10,118;UBERON:0003350,4.98e-10,9;UBERON:0004808,4.98e-10,9;UBERON:0001277,4.98e-10,9;UBERON:0002108,9.44e-09,4;UBERON:0004921,1.19e-08,114;UBERON:0000485,3.62e-08,11;UBERON:0001962,4.92e-08,2;UBERON:0001961,4.92e-08,2;UBERON:0001744,4.92e-08,2 | |||
|phase1_expression=0,0,0,0.30246421130683,0,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.60586496747019,0,0.86152399231815,0,0.950117097281869,1.51218077855958,1.10865255327652,0,0,0,2.3108129580102,2.49351968037739,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.77320476793256,3.22693639397348,5.78182913996663,9.3210556795154,0.949058123089023,15.646400698781,12.5667604400135,17.3092130675801,15.5971269695296,0.898819408654221,2.37751854862164,0.796565093017469,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09181281873089,0,0,0,3.75883422546199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.655490552289177,0.320125762024346,0.34461281373368,0,0.231768651889711,0,0.412085900803307,0.588795680537589,0,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.592302255241736,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.394017929502254,0,0.464810523557898,0.771626443924566,0,1.63752125911786,0.859484216193193,0,0,0 | |||
|short_description=p3@1300002K09Rik | |||
}} |
Revision as of 05:05, 14 September 2013
Short description: | p3@1300002K09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1300002K09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | 11bp_to_ENSMUST00000107783_5end |
EntrezGene: | 1300002K09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 6.55e-12 | 3 |
intestinal epithelial cell | 4.98e-10 | 9 |
epithelial cell of alimentary canal | 4.98e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.32e-32 | 31 |
gastrointestinal system | 6.43e-26 | 47 |
mucosa | 4.81e-18 | 15 |
intestinal mucosa | 7.96e-13 | 13 |
wall of intestine | 7.96e-13 | 13 |
gastrointestinal system mucosa | 7.96e-13 | 13 |
digestive system | 8.41e-11 | 116 |
digestive tract | 8.41e-11 | 116 |
primitive gut | 8.41e-11 | 116 |
organ component layer | 8.89e-11 | 24 |
endoderm-derived structure | 1.48e-10 | 118 |
endoderm | 1.48e-10 | 118 |
presumptive endoderm | 1.48e-10 | 118 |
epithelium of mucosa | 4.98e-10 | 9 |
gastrointestinal system epithelium | 4.98e-10 | 9 |
intestinal epithelium | 4.98e-10 | 9 |
small intestine | 9.44e-09 | 4 |
subdivision of digestive tract | 1.19e-08 | 114 |
simple columnar epithelium | 3.62e-08 | 11 |
gut-associated lymphoid tissue | 4.92e-08 | 2 |
mucosa-associated lymphoid tissue | 4.92e-08 | 2 |
lymphoid tissue | 4.92e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.