FFCP PHASE1:Mm9::chr1:167090905..167090912,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=83993|HGNC=|MCL_coexpression_id=248|UniProt=Q99ME7|association_with_transcript=-1bp_to_ENSMUST00000027859,NM_032005,uc007diw.1_5end|description=CAGE_peak_2_at_Tbx19_5end|id=chr1:167090905..167090912,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!4.66e-64!8;UBERON:0003296!4.66e-64!8;UBERON:0010133!4.66e-64!8;UBERON:0001894!3.26e-51!10;UBERON:0006222!3.26e-51!10;UBERON:0002780!3.51e-16!39;UBERON:0001890!3.51e-16!39;UBERON:0006240!3.51e-16!39;UBERON:0003080!9.20e-16!40;UBERON:0002616!9.30e-13!49;UBERON:0003056!9.30e-13!49;UBERON:0000955!1.72e-12!50;UBERON:0006238!1.72e-12!50;UBERON:0001049!5.51e-12!52;UBERON:0005068!5.51e-12!52;UBERON:0006241!5.51e-12!52;UBERON:0007135!5.51e-12!52;UBERON:0002368!2.75e-10!60;UBERON:0000033!8.91e-10!63;UBERON:0002530!1.92e-09!65;UBERON:0007811!1.20e-08!86;UBERON:0002346!1.35e-08!71;UBERON:0003075!1.35e-08!71;UBERON:0007284!1.35e-08!71;UBERON:0000949!1.87e-08!72;UBERON:0001017!2.44e-08!73;UBERON:0005743!2.44e-08!73;UBERON:0000073!4.26e-08!75;UBERON:0001016!4.26e-08!75;UBERON:0000153!7.71e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.71e-65,8;UBERON:0003296,3.71e-65,8;UBERON:0010133,3.71e-65,8;UBERON:0001894,2.77e-52,10;UBERON:0006222,2.77e-52,10;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002368,3.96e-09,60;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002530,1.88e-08,65;UBERON:0000949,1.17e-07,72;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46835250932197,0.36012218806262,0.517434735131018,1.92903331528433,5.49754724291048,5.52943334566419,5.43011767986999,3.34911444026059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Tbx19}} | ||
|EntrezGene=83993 | |||
|HGNC= | |||
|MCL_coexpression_id=248 | |||
|UniProt=Q99ME7 | |||
|association_with_transcript=-1bp_to_ENSMUST00000027859,NM_032005,uc007diw.1_5end | |||
|description=CAGE_peak_2_at_Tbx19_5end | |||
|id=chr1:167090905..167090912,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!4.66e-64!8;UBERON:0003296!4.66e-64!8;UBERON:0010133!4.66e-64!8;UBERON:0001894!3.26e-51!10;UBERON:0006222!3.26e-51!10;UBERON:0002780!3.51e-16!39;UBERON:0001890!3.51e-16!39;UBERON:0006240!3.51e-16!39;UBERON:0003080!9.20e-16!40;UBERON:0002616!9.30e-13!49;UBERON:0003056!9.30e-13!49;UBERON:0000955!1.72e-12!50;UBERON:0006238!1.72e-12!50;UBERON:0001049!5.51e-12!52;UBERON:0005068!5.51e-12!52;UBERON:0006241!5.51e-12!52;UBERON:0007135!5.51e-12!52;UBERON:0002368!2.75e-10!60;UBERON:0000033!8.91e-10!63;UBERON:0002530!1.92e-09!65;UBERON:0007811!1.20e-08!86;UBERON:0002346!1.35e-08!71;UBERON:0003075!1.35e-08!71;UBERON:0007284!1.35e-08!71;UBERON:0000949!1.87e-08!72;UBERON:0001017!2.44e-08!73;UBERON:0005743!2.44e-08!73;UBERON:0000073!4.26e-08!75;UBERON:0001016!4.26e-08!75;UBERON:0000153!7.71e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.71e-65,8;UBERON:0003296,3.71e-65,8;UBERON:0010133,3.71e-65,8;UBERON:0001894,2.77e-52,10;UBERON:0006222,2.77e-52,10;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002368,3.96e-09,60;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002530,1.88e-08,65;UBERON:0000949,1.17e-07,72;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46835250932197,0.36012218806262,0.517434735131018,1.92903331528433,5.49754724291048,5.52943334566419,5.43011767986999,3.34911444026059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Tbx19 | |||
}} |
Revision as of 19:32, 13 September 2013
Short description: | p2@Tbx19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tbx19_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | -1bp_to_ENSMUST00000027859, NM_032005, uc007diw.1_5end |
EntrezGene: | Tbx19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.71e-65 | 8 |
gland of diencephalon | 3.71e-65 | 8 |
neuroendocrine gland | 3.71e-65 | 8 |
diencephalon | 2.77e-52 | 10 |
future diencephalon | 2.77e-52 | 10 |
regional part of forebrain | 7.80e-14 | 39 |
forebrain | 7.80e-14 | 39 |
future forebrain | 7.80e-14 | 39 |
anterior neural tube | 1.69e-13 | 40 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
pre-chordal neural plate | 4.27e-11 | 49 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
endocrine gland | 3.96e-09 | 60 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
gland | 1.88e-08 | 65 |
endocrine system | 1.17e-07 | 72 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.