FFCP PHASE1:Mm9::chr11:58196248..58196291,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1293|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:58196248..58196291,+|id=chr11:58196248..58196291,+|ontology_enrichment_celltype=CL:0002563!4.51e-12!9;CL:0002251!4.51e-12!9;CL:0000239!4.60e-09!6;CL:0000677!4.60e-09!6;CL:0000212!4.60e-09!6;CL:0000584!4.60e-09!6;CL:0000075!1.33e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,8.83e-16,9;CL:0002251,8.83e-16,9;CL:0000239,2.10e-14,6;CL:0000677,2.10e-14,6;CL:0000584,2.10e-14,6;CL:0000075,3.03e-12,7;CL:0000066,1.91e-09,25;CL:0002076,6.20e-09,15;CL:0000682,5.53e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.07e-26!59;UBERON:0000160!7.91e-24!43;UBERON:0000344!6.73e-20!15;UBERON:0001242!2.81e-17!13;UBERON:0000060!2.81e-17!13;UBERON:0001262!2.81e-17!13;UBERON:0004786!2.81e-17!13;UBERON:0003350!4.51e-12!9;UBERON:0004808!4.51e-12!9;UBERON:0001277!4.51e-12!9;UBERON:0004923!1.07e-10!24;UBERON:0000485!1.85e-09!11;UBERON:0001007!7.35e-09!128;UBERON:0001555!7.35e-09!128;UBERON:0007026!7.35e-09!128;UBERON:0004119!1.50e-08!130;UBERON:0000925!1.50e-08!130;UBERON:0006595!1.50e-08!130;UBERON:0004921!1.13e-07!126;UBERON:0004185!1.13e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.53e-51,31;UBERON:0005409,1.46e-43,47;UBERON:0000344,5.13e-29,15;UBERON:0001242,1.46e-24,13;UBERON:0001262,1.46e-24,13;UBERON:0004786,1.46e-24,13;UBERON:0004923,6.42e-17,24;UBERON:0001007,3.35e-16,116;UBERON:0001555,3.35e-16,116;UBERON:0007026,3.35e-16,116;UBERON:0004119,8.31e-16,118;UBERON:0000925,8.31e-16,118;UBERON:0006595,8.31e-16,118;UBERON:0003350,8.83e-16,9;UBERON:0004808,8.83e-16,9;UBERON:0001277,8.83e-16,9;UBERON:0004921,5.58e-14,114;UBERON:0000485,1.15e-12,11;UBERON:0002108,6.96e-11,4;UBERON:0000331,1.71e-08,3;UBERON:0002116,1.71e-08,3;UBERON:0001204,1.71e-08,3;UBERON:0001168,1.71e-08,3|phase1_expression=0,2.44282785347553,8.64498554840118,5.74682001482977,9.01612313903425,4.02910252588535,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,5.96464130774642,7.46501553349526,5.59990595006797,4.30942465371778,16.9120843316173,3.52842181663903,11.7517170647311,0,0,0,0.866554859253824,2.49351968037739,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6391761218122,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,5.81262344397452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,3.30418782983798,3.17340679996253,0,0,0.38660238396628,1.4117846723634,1.33426826306922,3.04361001780095,9.96511029243474,2.14108641141214,4.27269854960458,5.17286827306992,3.50935356814416,12.5834717211591,7.99710784536369,5.97423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4933101186746,0,0,0,0,0,0,0,0,0,0,15.2747298882418,0,0,0.432021363287205,0.418176592028937,0.87345025498471,1.61837215661785,0.41326727862668,1.57053565190418,13.8688021422218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.467863216890817,0.429742108096597,0,0,0.695603506861264|short_description=p@chr11:58196248..58196291,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1293 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:58196248..58196291,+ | |||
|id=chr11:58196248..58196291,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.51e-12!9;CL:0002251!4.51e-12!9;CL:0000239!4.60e-09!6;CL:0000677!4.60e-09!6;CL:0000212!4.60e-09!6;CL:0000584!4.60e-09!6;CL:0000075!1.33e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.83e-16,9;CL:0002251,8.83e-16,9;CL:0000239,2.10e-14,6;CL:0000677,2.10e-14,6;CL:0000584,2.10e-14,6;CL:0000075,3.03e-12,7;CL:0000066,1.91e-09,25;CL:0002076,6.20e-09,15;CL:0000682,5.53e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.07e-26!59;UBERON:0000160!7.91e-24!43;UBERON:0000344!6.73e-20!15;UBERON:0001242!2.81e-17!13;UBERON:0000060!2.81e-17!13;UBERON:0001262!2.81e-17!13;UBERON:0004786!2.81e-17!13;UBERON:0003350!4.51e-12!9;UBERON:0004808!4.51e-12!9;UBERON:0001277!4.51e-12!9;UBERON:0004923!1.07e-10!24;UBERON:0000485!1.85e-09!11;UBERON:0001007!7.35e-09!128;UBERON:0001555!7.35e-09!128;UBERON:0007026!7.35e-09!128;UBERON:0004119!1.50e-08!130;UBERON:0000925!1.50e-08!130;UBERON:0006595!1.50e-08!130;UBERON:0004921!1.13e-07!126;UBERON:0004185!1.13e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.53e-51,31;UBERON:0005409,1.46e-43,47;UBERON:0000344,5.13e-29,15;UBERON:0001242,1.46e-24,13;UBERON:0001262,1.46e-24,13;UBERON:0004786,1.46e-24,13;UBERON:0004923,6.42e-17,24;UBERON:0001007,3.35e-16,116;UBERON:0001555,3.35e-16,116;UBERON:0007026,3.35e-16,116;UBERON:0004119,8.31e-16,118;UBERON:0000925,8.31e-16,118;UBERON:0006595,8.31e-16,118;UBERON:0003350,8.83e-16,9;UBERON:0004808,8.83e-16,9;UBERON:0001277,8.83e-16,9;UBERON:0004921,5.58e-14,114;UBERON:0000485,1.15e-12,11;UBERON:0002108,6.96e-11,4;UBERON:0000331,1.71e-08,3;UBERON:0002116,1.71e-08,3;UBERON:0001204,1.71e-08,3;UBERON:0001168,1.71e-08,3 | |||
|phase1_expression=0,2.44282785347553,8.64498554840118,5.74682001482977,9.01612313903425,4.02910252588535,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,5.96464130774642,7.46501553349526,5.59990595006797,4.30942465371778,16.9120843316173,3.52842181663903,11.7517170647311,0,0,0,0.866554859253824,2.49351968037739,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6391761218122,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,5.81262344397452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,3.30418782983798,3.17340679996253,0,0,0.38660238396628,1.4117846723634,1.33426826306922,3.04361001780095,9.96511029243474,2.14108641141214,4.27269854960458,5.17286827306992,3.50935356814416,12.5834717211591,7.99710784536369,5.97423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4933101186746,0,0,0,0,0,0,0,0,0,0,15.2747298882418,0,0,0.432021363287205,0.418176592028937,0.87345025498471,1.61837215661785,0.41326727862668,1.57053565190418,13.8688021422218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.467863216890817,0.429742108096597,0,0,0.695603506861264 | |||
|short_description=p@chr11:58196248..58196291,+ | |||
}} |
Revision as of 20:07, 12 September 2013
Short description: | p@chr11:58196248..58196291, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58196248..58196291, + |
Coexpression cluster: | MCL_coexpression_mm9:1293 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.83e-16 | 9 |
epithelial cell of alimentary canal | 8.83e-16 | 9 |
brush border epithelial cell | 2.10e-14 | 6 |
gut absorptive cell | 2.10e-14 | 6 |
enterocyte | 2.10e-14 | 6 |
columnar/cuboidal epithelial cell | 3.03e-12 | 7 |
epithelial cell | 1.91e-09 | 25 |
endo-epithelial cell | 6.20e-09 | 15 |
M cell of gut | 5.53e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.53e-51 | 31 |
gastrointestinal system | 1.46e-43 | 47 |
mucosa | 5.13e-29 | 15 |
intestinal mucosa | 1.46e-24 | 13 |
wall of intestine | 1.46e-24 | 13 |
gastrointestinal system mucosa | 1.46e-24 | 13 |
organ component layer | 6.42e-17 | 24 |
digestive system | 3.35e-16 | 116 |
digestive tract | 3.35e-16 | 116 |
primitive gut | 3.35e-16 | 116 |
endoderm-derived structure | 8.31e-16 | 118 |
endoderm | 8.31e-16 | 118 |
presumptive endoderm | 8.31e-16 | 118 |
epithelium of mucosa | 8.83e-16 | 9 |
gastrointestinal system epithelium | 8.83e-16 | 9 |
intestinal epithelium | 8.83e-16 | 9 |
subdivision of digestive tract | 5.58e-14 | 114 |
simple columnar epithelium | 1.15e-12 | 11 |
small intestine | 6.96e-11 | 4 |
ileal mucosa | 1.71e-08 | 3 |
ileum | 1.71e-08 | 3 |
mucosa of small intestine | 1.71e-08 | 3 |
wall of small intestine | 1.71e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.