FFCP PHASE1:Mm9::chr11:44456648..44456656,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=334|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:44456648..44456656,+|id=chr11:44456648..44456656,+|ontology_enrichment_celltype=CL:0002611!6.30e-12!2;CL:0002612!3.63e-08!3;CL:0000117!5.28e-08!23;CL:0000337!5.28e-08!23;CL:0002608!7.46e-08!3|ontology_enrichment_celltype_v019_2=CL:0002611,9.50e-23,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!2.48e-22!6;UBERON:0005174!2.48e-22!6;UBERON:0001137!2.48e-22!6;UBERON:0003076!2.32e-21!12;UBERON:0003057!2.32e-21!12;UBERON:0001948!1.05e-17!5;UBERON:0002315!1.05e-17!5;UBERON:0002256!6.30e-12!2;UBERON:0001049!5.38e-09!52;UBERON:0005068!5.38e-09!52;UBERON:0006241!5.38e-09!52;UBERON:0007135!5.38e-09!52;UBERON:0002257!3.63e-08!3;UBERON:0002020!4.08e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002256,9.50e-23,2;UBERON:0000369,4.56e-10,5;UBERON:0002435,4.56e-10,5;UBERON:0000204,4.56e-10,5;UBERON:0010082,4.56e-10,5;UBERON:0001948,5.59e-10,5;UBERON:0002315,5.59e-10,5;UBERON:0002240,1.52e-08,6;UBERON:0005174,1.52e-08,6;UBERON:0001137,1.52e-08,6;UBERON:0002420,8.61e-07,8;UBERON:0007245,8.61e-07,8;UBERON:0010009,8.61e-07,8;UBERON:0010011,8.61e-07,8;UBERON:0000454,8.61e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.10434270475807,0.367472397644862,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,5.02617408451458,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr11:44456648..44456656,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=334 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:44456648..44456656,+ | |||
|id=chr11:44456648..44456656,+ | |||
|ontology_enrichment_celltype=CL:0002611!6.30e-12!2;CL:0002612!3.63e-08!3;CL:0000117!5.28e-08!23;CL:0000337!5.28e-08!23;CL:0002608!7.46e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,9.50e-23,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!2.48e-22!6;UBERON:0005174!2.48e-22!6;UBERON:0001137!2.48e-22!6;UBERON:0003076!2.32e-21!12;UBERON:0003057!2.32e-21!12;UBERON:0001948!1.05e-17!5;UBERON:0002315!1.05e-17!5;UBERON:0002256!6.30e-12!2;UBERON:0001049!5.38e-09!52;UBERON:0005068!5.38e-09!52;UBERON:0006241!5.38e-09!52;UBERON:0007135!5.38e-09!52;UBERON:0002257!3.63e-08!3;UBERON:0002020!4.08e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002256,9.50e-23,2;UBERON:0000369,4.56e-10,5;UBERON:0002435,4.56e-10,5;UBERON:0000204,4.56e-10,5;UBERON:0010082,4.56e-10,5;UBERON:0001948,5.59e-10,5;UBERON:0002315,5.59e-10,5;UBERON:0002240,1.52e-08,6;UBERON:0005174,1.52e-08,6;UBERON:0001137,1.52e-08,6;UBERON:0002420,8.61e-07,8;UBERON:0007245,8.61e-07,8;UBERON:0010009,8.61e-07,8;UBERON:0010011,8.61e-07,8;UBERON:0000454,8.61e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.10434270475807,0.367472397644862,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,5.02617408451458,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:44456648..44456656,+ | |||
}} |
Revision as of 19:41, 12 September 2013
Short description: | p@chr11:44456648..44456656, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:44456648..44456656, + |
Coexpression cluster: | MCL_coexpression_mm9:334 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 9.50e-23 | 2 |
Ontology term | p-value | n |
---|---|---|
dorsal horn of spinal cord | 9.50e-23 | 2 |
corpus striatum | 4.56e-10 | 5 |
striatum | 4.56e-10 | 5 |
ventral part of telencephalon | 4.56e-10 | 5 |
future corpus striatum | 4.56e-10 | 5 |
regional part of spinal cord | 5.59e-10 | 5 |
gray matter of spinal cord | 5.59e-10 | 5 |
spinal cord | 1.52e-08 | 6 |
dorsal region element | 1.52e-08 | 6 |
dorsum | 1.52e-08 | 6 |
basal ganglion | 8.61e-07 | 8 |
nuclear complex of neuraxis | 8.61e-07 | 8 |
aggregate regional part of brain | 8.61e-07 | 8 |
collection of basal ganglia | 8.61e-07 | 8 |
cerebral subcortex | 8.61e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.