FFCP PHASE1:Mm9::chr19:38470515..38470573,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=240660|HGNC=|MCL_coexpression_id=24|UniProt=Q8BY79,Q8BMM7|association_with_transcript=45bp_to_ENSMUST00000054098,NM_175507,uc008hjm.1,uc008hjn.1,uc012blh.1_5end|description=CAGE_peak_1_at_Tmem20_5end|id=chr19:38470515..38470573,+|ontology_enrichment_celltype=CL:0002563!4.80e-07!9;CL:0002251!4.80e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,4.70e-07,9;CL:0002251,4.70e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.32e-20!59;UBERON:0001007!1.13e-19!128;UBERON:0001555!1.13e-19!128;UBERON:0007026!1.13e-19!128;UBERON:0004119!3.52e-19!130;UBERON:0000925!3.52e-19!130;UBERON:0006595!3.52e-19!130;UBERON:0004921!1.85e-18!126;UBERON:0004185!1.85e-18!126;UBERON:0000160!3.20e-18!43;UBERON:0000344!8.68e-11!15;UBERON:0001242!1.51e-09!13;UBERON:0000060!1.51e-09!13;UBERON:0001262!1.51e-09!13;UBERON:0004786!1.51e-09!13;UBERON:0005172!5.23e-08!49;UBERON:0005173!5.23e-08!49;UBERON:0002417!5.23e-08!49;UBERON:0000916!5.23e-08!49;UBERON:0009854!1.00e-07!23;UBERON:0009856!1.00e-07!23;UBERON:0000466!1.09e-07!79;UBERON:0004923!1.87e-07!24;UBERON:0002108!2.88e-07!16;UBERON:0002107!3.13e-07!22;UBERON:0007499!3.13e-07!22;UBERON:0006925!3.13e-07!22;UBERON:0009497!3.13e-07!22;UBERON:0000015!3.13e-07!22;UBERON:0002423!3.13e-07!22;UBERON:0006235!3.13e-07!22;UBERON:0008835!3.13e-07!22;UBERON:0003894!3.13e-07!22;UBERON:0004161!3.13e-07!22;UBERON:0008836!3.13e-07!22;UBERON:0000949!3.16e-07!72;UBERON:0003350!4.80e-07!9;UBERON:0004808!4.80e-07!9;UBERON:0001277!4.80e-07!9;UBERON:0003929!5.87e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.54e-16,47;UBERON:0001007,3.21e-15,116;UBERON:0001555,3.21e-15,116;UBERON:0007026,3.21e-15,116;UBERON:0004119,8.99e-15,118;UBERON:0000925,8.99e-15,118;UBERON:0006595,8.99e-15,118;UBERON:0000160,2.85e-14,31;UBERON:0004921,3.83e-14,114;UBERON:0000344,8.39e-11,15;UBERON:0001242,1.47e-09,13;UBERON:0001262,1.47e-09,13;UBERON:0004786,1.47e-09,13;UBERON:0005177,1.79e-08,79;UBERON:0005172,5.11e-08,49;UBERON:0005173,5.11e-08,49;UBERON:0002417,5.11e-08,49;UBERON:0000916,5.11e-08,49;UBERON:0009854,9.77e-08,23;UBERON:0009856,9.77e-08,23;UBERON:0004923,1.83e-07,24;UBERON:0000949,2.59e-07,72;UBERON:0002107,3.07e-07,22;UBERON:0007499,3.07e-07,22;UBERON:0006925,3.07e-07,22;UBERON:0009497,3.07e-07,22;UBERON:0000015,3.07e-07,22;UBERON:0002423,3.07e-07,22;UBERON:0006235,3.07e-07,22;UBERON:0008835,3.07e-07,22;UBERON:0003894,3.07e-07,22;UBERON:0004161,3.07e-07,22;UBERON:0008836,3.07e-07,22;UBERON:0003350,4.70e-07,9;UBERON:0004808,4.70e-07,9;UBERON:0001277,4.70e-07,9;UBERON:0003929,4.74e-07,55|phase1_expression=1.76163731815273,143.428892539777,181.544696516425,281.594180726659,263.471153951779,62.2832098793111,50.226717728038,16.7860320474049,8.72890077340334,8.42632294759177,16.608142917874,23.4530147446289,10.785645985666,9.09172185157573,10.6595123781012,9.31386229993199,5.59649502502517,1.73504190947031,1.50825876966313,1.69755860719212,5.27268398936633,4.56738375524072,8.097193463307,69.9166887607187,88.5519824919276,160.784949952206,149.474412667199,98.4703533374513,108.123325670677,125.763034750205,58.3151243023451,8.25539875497521,7.38077745101484,0,61.8142466267728,70.3172549866423,64.3133472226463,0,0,0,1.17646297606203,0,1.94204141212461,0.125896817975577,0.405507724878058,0,2.34717403304412,2.61630187656536,1.31811709640683,0.194429899074283,5.45947044338914,1.43752564364972,0.503347818173209,11.6057942721815,11.4271891708438,0.771778308107841,0.573066879877513,1.54701627683233,1.21389876515759,0.528990979272033,0.633831403506179,2.37191172448392,9.78224275722253,3.1496490104849,0.988866362566974,0.7104801149461,2.99600110518405,1.92109152660777,1.76272340924412,1.75507719831198,1.05162480675691,1.42825492201902,2.42955395046775,1.22490799214954,0.766763768145891,1.83843757322004,0,2.17068474744819,0.921639199537461,0.659431438650969,0.914876436024097,0,0.837548997004143,1.68828783009504,1.98637722109853,0.294628585473668,1.28134512719193,0.372798891650601,3.18050011999373,3.40072020480535,11.8844440367688,24.9522924324602,52.3577926954968,8.09554787456726,31.8390444549358,17.9210754838934,12.2186645514624,0.170430322578058,0.519572009205738,0.35333957451034,2.95771181531029,0,0,0,12.9894624606728,11.6545538118545,12.6381111253696,36.082105991223,3.88406825470758,12.3206975423805,3.81667718885499,2.43572382649713,3.68984795609694,4.6724018571313,4.70354828542819,11.8126595849895,1.97755974187499,3.32578520915797,3.5384422077995,4.04417124868523,6.40440403535141,5.81850303762267,52.1896931410742,2.34224637609238,2.51336048176146,74.8489171761173,2.15667224110656,4.19931911695385,3.17675567682662,0.748953197024114,0.457500602818626,0.125654352112864,2.25971616249959,3.06858548796397,1.87009240103604,0.648965052271031,5.09196819251581,8.8328949133166,16.6797020566225,24.8321389946039,3.6433724029557,5.28774840196988,5.04173963454978,4.82255417074288,4.08218994907967,5.50888997224854,4.02917415606834,8.01980449290949,2.5868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| ||
|EntrezGene=240660 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q8BY79,Q8BMM7 | |||
|association_with_transcript=45bp_to_ENSMUST00000054098,NM_175507,uc008hjm.1,uc008hjn.1,uc012blh.1_5end | |||
|description=CAGE_peak_1_at_Tmem20_5end | |||
|id=chr19:38470515..38470573,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.80e-07!9;CL:0002251!4.80e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.70e-07,9;CL:0002251,4.70e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.32e-20!59;UBERON:0001007!1.13e-19!128;UBERON:0001555!1.13e-19!128;UBERON:0007026!1.13e-19!128;UBERON:0004119!3.52e-19!130;UBERON:0000925!3.52e-19!130;UBERON:0006595!3.52e-19!130;UBERON:0004921!1.85e-18!126;UBERON:0004185!1.85e-18!126;UBERON:0000160!3.20e-18!43;UBERON:0000344!8.68e-11!15;UBERON:0001242!1.51e-09!13;UBERON:0000060!1.51e-09!13;UBERON:0001262!1.51e-09!13;UBERON:0004786!1.51e-09!13;UBERON:0005172!5.23e-08!49;UBERON:0005173!5.23e-08!49;UBERON:0002417!5.23e-08!49;UBERON:0000916!5.23e-08!49;UBERON:0009854!1.00e-07!23;UBERON:0009856!1.00e-07!23;UBERON:0000466!1.09e-07!79;UBERON:0004923!1.87e-07!24;UBERON:0002108!2.88e-07!16;UBERON:0002107!3.13e-07!22;UBERON:0007499!3.13e-07!22;UBERON:0006925!3.13e-07!22;UBERON:0009497!3.13e-07!22;UBERON:0000015!3.13e-07!22;UBERON:0002423!3.13e-07!22;UBERON:0006235!3.13e-07!22;UBERON:0008835!3.13e-07!22;UBERON:0003894!3.13e-07!22;UBERON:0004161!3.13e-07!22;UBERON:0008836!3.13e-07!22;UBERON:0000949!3.16e-07!72;UBERON:0003350!4.80e-07!9;UBERON:0004808!4.80e-07!9;UBERON:0001277!4.80e-07!9;UBERON:0003929!5.87e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.54e-16,47;UBERON:0001007,3.21e-15,116;UBERON:0001555,3.21e-15,116;UBERON:0007026,3.21e-15,116;UBERON:0004119,8.99e-15,118;UBERON:0000925,8.99e-15,118;UBERON:0006595,8.99e-15,118;UBERON:0000160,2.85e-14,31;UBERON:0004921,3.83e-14,114;UBERON:0000344,8.39e-11,15;UBERON:0001242,1.47e-09,13;UBERON:0001262,1.47e-09,13;UBERON:0004786,1.47e-09,13;UBERON:0005177,1.79e-08,79;UBERON:0005172,5.11e-08,49;UBERON:0005173,5.11e-08,49;UBERON:0002417,5.11e-08,49;UBERON:0000916,5.11e-08,49;UBERON:0009854,9.77e-08,23;UBERON:0009856,9.77e-08,23;UBERON:0004923,1.83e-07,24;UBERON:0000949,2.59e-07,72;UBERON:0002107,3.07e-07,22;UBERON:0007499,3.07e-07,22;UBERON:0006925,3.07e-07,22;UBERON:0009497,3.07e-07,22;UBERON:0000015,3.07e-07,22;UBERON:0002423,3.07e-07,22;UBERON:0006235,3.07e-07,22;UBERON:0008835,3.07e-07,22;UBERON:0003894,3.07e-07,22;UBERON:0004161,3.07e-07,22;UBERON:0008836,3.07e-07,22;UBERON:0003350,4.70e-07,9;UBERON:0004808,4.70e-07,9;UBERON:0001277,4.70e-07,9;UBERON:0003929,4.74e-07,55 | |||
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| |||
|short_description=p1@Tmem20 | |||
}} |
Revision as of 17:31, 13 September 2013
Short description: | p1@Tmem20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem20_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 45bp_to_ENSMUST00000054098, NM_175507, uc008hjm.1, uc008hjn.1, uc012blh.1_5end |
EntrezGene: | Tmem20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.70e-07 | 9 |
epithelial cell of alimentary canal | 4.70e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.