FFCP PHASE1:Mm9::chr4:119834024..119834030,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13615|HGNC=|MCL_coexpression_id=12|UniProt=A2A885,P22389|association_with_transcript=0bp_to_NM_007902,uc008unb.1_5end|description=CAGE_peak_1_at_Edn2_5end|id=chr4:119834024..119834030,+|ontology_enrichment_celltype=CL:0002563!5.38e-08!9;CL:0002251!5.38e-08!9;CL:0000066!5.16e-07!25|ontology_enrichment_celltype_v019_2=CL:0002563,1.81e-11,9;CL:0002251,1.81e-11,9;CL:0002076,6.59e-10,15;CL:0000066,2.30e-09,25;CL:0000239,2.85e-08,6;CL:0000677,2.85e-08,6;CL:0000584,2.85e-08,6;CL:0000223,1.01e-07,20;CL:0000075,7.14e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!8.35e-14!59;UBERON:0000160!7.93e-13!43;UBERON:0000344!2.02e-12!15;UBERON:0004923!4.74e-11!24;UBERON:0001242!6.31e-11!13;UBERON:0000060!6.31e-11!13;UBERON:0001262!6.31e-11!13;UBERON:0004786!6.31e-11!13;UBERON:0003350!5.38e-08!9;UBERON:0004808!5.38e-08!9;UBERON:0001277!5.38e-08!9;UBERON:0000485!5.50e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.00e-27,31;UBERON:0005409,8.97e-22,47;UBERON:0000344,2.80e-18,15;UBERON:0001242,5.64e-16,13;UBERON:0001262,5.64e-16,13;UBERON:0004786,5.64e-16,13;UBERON:0004923,1.25e-15,24;UBERON:0003350,1.81e-11,9;UBERON:0004808,1.81e-11,9;UBERON:0001277,1.81e-11,9;UBERON:0000485,7.37e-09,11;UBERON:0004119,1.92e-07,118;UBERON:0000925,1.92e-07,118;UBERON:0006595,1.92e-07,118|phase1_expression=0.960893082628764,39.7831964708872,45.0449246995641,29.9439569193762,36.064492556137,31.7291823913472,26.8654536684855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5985982167802,41.9818984352921,52.8293406985819,56.4298214968388,39.6467068142036,40.0949415052949,46.8776041353471,29.2684274065002,0,0,0,20.5084650023405,12.6338330472454,43.8964115964094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,5.90664307998836,0.151143120213571,3.18850937571846,0,0.679971333707751,0,0,0,1.12355536105401,0,0,0,0.422530259330042,0,0,0,2.16491041011214,1.77351905832569,2.52762222507392,1.1418387971906,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,9.14621380617183,0.144599356919912,0,0,0,0,0,0,0,13.2837668708468,0.11981512450592,0,0,0,0,0,0,0.255715457330331,0,0,2.24046600470696,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.876782929710299,2.78047249225598,1.39300866608867,2.05782136407943,1.79130840136644,0,0,0,0.207125772535502,0,0.36012412292203,0.946978942340841,1.18058539048442,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0,0,0.439100230582101,0,0,0.102904612379284,19.1642894130603,1.58670339998127,0.853153002140936,1.39342003116263,1.28867461322093,1.61346819698674,2.2237804384487,3.99473814836374,17.5575752771469,4.44687177754829,6.78605063760728,5.37182474511107,5.26403035221624,12.5834717211591,14.4812493416045,12.3467589417708,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.651859905768103,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.94864477166304,1.95872164033981,0.81443479676788,0.989820737835213,0,0,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,1.29214146584111,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0,0.891844088010353,0.329098041204242,0.913394847343798,3.98941903708308,23.0896957241564,0.661585194164886,5.93590510589328,4.19807509409354,5.12659861889325,6.80422360817878,8.20704498725306,11.659233465194,0.556275906031529,0,1.44470807574256,0.740778109478847,0.188368457004691,0,0,0.339956859987711,0.419854356970974,0.138199973804424,0,0.474503990371703,1.21991680276109,1.40406943068342,2.71814784818809,2.40198820120795,0.944050424693745,0.909188012978695,0.523511883968059,3.88844919875379,0,0,1.19613236835183,1.15820943319968,0.583353565032143,0.129159823477731,0.337912250981556,0.352071715937262,0.2604087696879,0,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.358053391334963,0.39736270956253,0,0,0,0.0762068066549998,0.302478555410522,0.0974578807397524,0.0962118416403295,0,1.58711268530648,0,0,0,0,2.064507229963,1.28206136987086,2.57242054894879,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.729320151204882,0,1.10306105070008,0.222246727801615,0.206035057238894,1.28367683836726,1.01078884705519,1.01391719956096,1.32038438970253,1.03005658216871,0.960377286073039,0.689225627467359,1.42888107384922,0.695305955669133,0.964546102318525,0.824171801606613,1.61918812147837,1.02860775715625,1.06485483695602,0.715308569841963,1.0174249164263,1.78807822789128,1.09998990259179,0.73171189149109,2.10455769150274,0.950628796921032,1.12228454331548,0.830445126869219,1.18205378850676,1.63692417267876,1.08455788830176,1.73615949883027,4.74640098082097,2.57324769289949,3.00819475667618,0.191288332068843,1.54413993383661,0|short_description=p1@Edn2}} | ||
|EntrezGene=13615 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=A2A885,P22389 | |||
|association_with_transcript=0bp_to_NM_007902,uc008unb.1_5end | |||
|description=CAGE_peak_1_at_Edn2_5end | |||
|id=chr4:119834024..119834030,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.38e-08!9;CL:0002251!5.38e-08!9;CL:0000066!5.16e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.81e-11,9;CL:0002251,1.81e-11,9;CL:0002076,6.59e-10,15;CL:0000066,2.30e-09,25;CL:0000239,2.85e-08,6;CL:0000677,2.85e-08,6;CL:0000584,2.85e-08,6;CL:0000223,1.01e-07,20;CL:0000075,7.14e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.35e-14!59;UBERON:0000160!7.93e-13!43;UBERON:0000344!2.02e-12!15;UBERON:0004923!4.74e-11!24;UBERON:0001242!6.31e-11!13;UBERON:0000060!6.31e-11!13;UBERON:0001262!6.31e-11!13;UBERON:0004786!6.31e-11!13;UBERON:0003350!5.38e-08!9;UBERON:0004808!5.38e-08!9;UBERON:0001277!5.38e-08!9;UBERON:0000485!5.50e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.00e-27,31;UBERON:0005409,8.97e-22,47;UBERON:0000344,2.80e-18,15;UBERON:0001242,5.64e-16,13;UBERON:0001262,5.64e-16,13;UBERON:0004786,5.64e-16,13;UBERON:0004923,1.25e-15,24;UBERON:0003350,1.81e-11,9;UBERON:0004808,1.81e-11,9;UBERON:0001277,1.81e-11,9;UBERON:0000485,7.37e-09,11;UBERON:0004119,1.92e-07,118;UBERON:0000925,1.92e-07,118;UBERON:0006595,1.92e-07,118 | |||
|phase1_expression=0.960893082628764,39.7831964708872,45.0449246995641,29.9439569193762,36.064492556137,31.7291823913472,26.8654536684855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5985982167802,41.9818984352921,52.8293406985819,56.4298214968388,39.6467068142036,40.0949415052949,46.8776041353471,29.2684274065002,0,0,0,20.5084650023405,12.6338330472454,43.8964115964094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,5.90664307998836,0.151143120213571,3.18850937571846,0,0.679971333707751,0,0,0,1.12355536105401,0,0,0,0.422530259330042,0,0,0,2.16491041011214,1.77351905832569,2.52762222507392,1.1418387971906,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,9.14621380617183,0.144599356919912,0,0,0,0,0,0,0,13.2837668708468,0.11981512450592,0,0,0,0,0,0,0.255715457330331,0,0,2.24046600470696,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.876782929710299,2.78047249225598,1.39300866608867,2.05782136407943,1.79130840136644,0,0,0,0.207125772535502,0,0.36012412292203,0.946978942340841,1.18058539048442,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0,0,0.439100230582101,0,0,0.102904612379284,19.1642894130603,1.58670339998127,0.853153002140936,1.39342003116263,1.28867461322093,1.61346819698674,2.2237804384487,3.99473814836374,17.5575752771469,4.44687177754829,6.78605063760728,5.37182474511107,5.26403035221624,12.5834717211591,14.4812493416045,12.3467589417708,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.651859905768103,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.94864477166304,1.95872164033981,0.81443479676788,0.989820737835213,0,0,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,1.29214146584111,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0,0.891844088010353,0.329098041204242,0.913394847343798,3.98941903708308,23.0896957241564,0.661585194164886,5.93590510589328,4.19807509409354,5.12659861889325,6.80422360817878,8.20704498725306,11.659233465194,0.556275906031529,0,1.44470807574256,0.740778109478847,0.188368457004691,0,0,0.339956859987711,0.419854356970974,0.138199973804424,0,0.474503990371703,1.21991680276109,1.40406943068342,2.71814784818809,2.40198820120795,0.944050424693745,0.909188012978695,0.523511883968059,3.88844919875379,0,0,1.19613236835183,1.15820943319968,0.583353565032143,0.129159823477731,0.337912250981556,0.352071715937262,0.2604087696879,0,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.358053391334963,0.39736270956253,0,0,0,0.0762068066549998,0.302478555410522,0.0974578807397524,0.0962118416403295,0,1.58711268530648,0,0,0,0,2.064507229963,1.28206136987086,2.57242054894879,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.729320151204882,0,1.10306105070008,0.222246727801615,0.206035057238894,1.28367683836726,1.01078884705519,1.01391719956096,1.32038438970253,1.03005658216871,0.960377286073039,0.689225627467359,1.42888107384922,0.695305955669133,0.964546102318525,0.824171801606613,1.61918812147837,1.02860775715625,1.06485483695602,0.715308569841963,1.0174249164263,1.78807822789128,1.09998990259179,0.73171189149109,2.10455769150274,0.950628796921032,1.12228454331548,0.830445126869219,1.18205378850676,1.63692417267876,1.08455788830176,1.73615949883027,4.74640098082097,2.57324769289949,3.00819475667618,0.191288332068843,1.54413993383661,0 | |||
|short_description=p1@Edn2 | |||
}} |
Revision as of 03:38, 14 September 2013
Short description: | p1@Edn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Edn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NM_007902, uc008unb.1_5end |
EntrezGene: | Edn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.81e-11 | 9 |
epithelial cell of alimentary canal | 1.81e-11 | 9 |
endo-epithelial cell | 6.59e-10 | 15 |
epithelial cell | 2.30e-09 | 25 |
brush border epithelial cell | 2.85e-08 | 6 |
gut absorptive cell | 2.85e-08 | 6 |
enterocyte | 2.85e-08 | 6 |
endodermal cell | 1.01e-07 | 20 |
columnar/cuboidal epithelial cell | 7.14e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.00e-27 | 31 |
gastrointestinal system | 8.97e-22 | 47 |
mucosa | 2.80e-18 | 15 |
intestinal mucosa | 5.64e-16 | 13 |
wall of intestine | 5.64e-16 | 13 |
gastrointestinal system mucosa | 5.64e-16 | 13 |
organ component layer | 1.25e-15 | 24 |
epithelium of mucosa | 1.81e-11 | 9 |
gastrointestinal system epithelium | 1.81e-11 | 9 |
intestinal epithelium | 1.81e-11 | 9 |
simple columnar epithelium | 7.37e-09 | 11 |
endoderm-derived structure | 1.92e-07 | 118 |
endoderm | 1.92e-07 | 118 |
presumptive endoderm | 1.92e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.