FFCP PHASE1:Mm9::chr6:78322091..78322132,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=448|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:78322091..78322132,+|id=chr6:78322091..78322132,+|ontology_enrichment_celltype=CL:0000239!7.80e-20!6;CL:0000677!7.80e-20!6;CL:0000212!7.80e-20!6;CL:0000584!7.80e-20!6;CL:0000075!6.33e-17!7;CL:0002563!4.85e-13!9;CL:0002251!4.85e-13!9;CL:0000473!1.57e-11!3;CL:0000627!1.57e-11!3;CL:0000682!1.57e-11!3;CL:0000066!9.16e-10!25;CL:0002076!1.37e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,5.85e-17,6;CL:0000677,5.85e-17,6;CL:0000584,5.85e-17,6;CL:0000075,1.62e-14,7;CL:0000682,1.36e-13,3;CL:0002563,2.98e-11,9;CL:0002251,2.98e-11,9;CL:0000066,1.23e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.18e-30!15;UBERON:0000160!1.96e-27!43;UBERON:0001242!6.63e-25!13;UBERON:0000060!6.63e-25!13;UBERON:0001262!6.63e-25!13;UBERON:0004786!6.63e-25!13;UBERON:0005409!6.04e-19!59;UBERON:0004923!2.67e-18!24;UBERON:0003350!4.85e-13!9;UBERON:0004808!4.85e-13!9;UBERON:0001277!4.85e-13!9;UBERON:0000331!9.74e-12!3;UBERON:0002116!9.74e-12!3;UBERON:0001204!9.74e-12!3;UBERON:0001168!9.74e-12!3;UBERON:0000485!1.45e-10!11;UBERON:0001007!1.52e-09!128;UBERON:0001555!1.52e-09!128;UBERON:0007026!1.52e-09!128;UBERON:0004119!2.49e-09!130;UBERON:0000925!2.49e-09!130;UBERON:0006595!2.49e-09!130;UBERON:0004921!1.14e-07!126;UBERON:0004185!1.14e-07!126;UBERON:0001962!1.81e-07!2;UBERON:0001961!1.81e-07!2;UBERON:0001744!1.81e-07!2;UBERON:0002108!2.62e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.58e-31,15;UBERON:0001242,1.28e-24,13;UBERON:0001262,1.28e-24,13;UBERON:0004786,1.28e-24,13;UBERON:0000160,2.77e-20,31;UBERON:0004923,6.60e-19,24;UBERON:0000331,7.64e-14,3;UBERON:0002116,7.64e-14,3;UBERON:0001204,7.64e-14,3;UBERON:0001168,7.64e-14,3;UBERON:0005409,1.31e-12,47;UBERON:0003350,2.98e-11,9;UBERON:0004808,2.98e-11,9;UBERON:0001277,2.98e-11,9;UBERON:0002108,1.68e-10,4;UBERON:0000485,3.60e-09,11;UBERON:0001962,1.08e-08,2;UBERON:0001961,1.08e-08,2;UBERON:0001744,1.08e-08,2|phase1_expression=0,8.37540978334467,11.8299802241279,5.14189159221611,6.51164448930251,0.503637815735669,2.33612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,4.81759490241057,25.8404383851759,15.0766698655676,7.75696437669201,42.7552693776841,10.837295579677,31.4857325130533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,14.2803305998314,0,0,0,0,0,0,5.21981967698963,0.164698954724011,0,0,0,2.69645822596266,0.864552199498777,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,1.58018378967908,11.5960469432499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:78322091..78322132,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=448 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:78322091..78322132,+ | |||
|id=chr6:78322091..78322132,+ | |||
|ontology_enrichment_celltype=CL:0000239!7.80e-20!6;CL:0000677!7.80e-20!6;CL:0000212!7.80e-20!6;CL:0000584!7.80e-20!6;CL:0000075!6.33e-17!7;CL:0002563!4.85e-13!9;CL:0002251!4.85e-13!9;CL:0000473!1.57e-11!3;CL:0000627!1.57e-11!3;CL:0000682!1.57e-11!3;CL:0000066!9.16e-10!25;CL:0002076!1.37e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.85e-17,6;CL:0000677,5.85e-17,6;CL:0000584,5.85e-17,6;CL:0000075,1.62e-14,7;CL:0000682,1.36e-13,3;CL:0002563,2.98e-11,9;CL:0002251,2.98e-11,9;CL:0000066,1.23e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.18e-30!15;UBERON:0000160!1.96e-27!43;UBERON:0001242!6.63e-25!13;UBERON:0000060!6.63e-25!13;UBERON:0001262!6.63e-25!13;UBERON:0004786!6.63e-25!13;UBERON:0005409!6.04e-19!59;UBERON:0004923!2.67e-18!24;UBERON:0003350!4.85e-13!9;UBERON:0004808!4.85e-13!9;UBERON:0001277!4.85e-13!9;UBERON:0000331!9.74e-12!3;UBERON:0002116!9.74e-12!3;UBERON:0001204!9.74e-12!3;UBERON:0001168!9.74e-12!3;UBERON:0000485!1.45e-10!11;UBERON:0001007!1.52e-09!128;UBERON:0001555!1.52e-09!128;UBERON:0007026!1.52e-09!128;UBERON:0004119!2.49e-09!130;UBERON:0000925!2.49e-09!130;UBERON:0006595!2.49e-09!130;UBERON:0004921!1.14e-07!126;UBERON:0004185!1.14e-07!126;UBERON:0001962!1.81e-07!2;UBERON:0001961!1.81e-07!2;UBERON:0001744!1.81e-07!2;UBERON:0002108!2.62e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.58e-31,15;UBERON:0001242,1.28e-24,13;UBERON:0001262,1.28e-24,13;UBERON:0004786,1.28e-24,13;UBERON:0000160,2.77e-20,31;UBERON:0004923,6.60e-19,24;UBERON:0000331,7.64e-14,3;UBERON:0002116,7.64e-14,3;UBERON:0001204,7.64e-14,3;UBERON:0001168,7.64e-14,3;UBERON:0005409,1.31e-12,47;UBERON:0003350,2.98e-11,9;UBERON:0004808,2.98e-11,9;UBERON:0001277,2.98e-11,9;UBERON:0002108,1.68e-10,4;UBERON:0000485,3.60e-09,11;UBERON:0001962,1.08e-08,2;UBERON:0001961,1.08e-08,2;UBERON:0001744,1.08e-08,2 | |||
|phase1_expression=0,8.37540978334467,11.8299802241279,5.14189159221611,6.51164448930251,0.503637815735669,2.33612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,4.81759490241057,25.8404383851759,15.0766698655676,7.75696437669201,42.7552693776841,10.837295579677,31.4857325130533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,14.2803305998314,0,0,0,0,0,0,5.21981967698963,0.164698954724011,0,0,0,2.69645822596266,0.864552199498777,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,1.58018378967908,11.5960469432499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:78322091..78322132,+ | |||
}} |
Revision as of 10:39, 14 September 2013
Short description: | p@chr6:78322091..78322132, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78322091..78322132, + |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.85e-17 | 6 |
gut absorptive cell | 5.85e-17 | 6 |
enterocyte | 5.85e-17 | 6 |
columnar/cuboidal epithelial cell | 1.62e-14 | 7 |
M cell of gut | 1.36e-13 | 3 |
intestinal epithelial cell | 2.98e-11 | 9 |
epithelial cell of alimentary canal | 2.98e-11 | 9 |
epithelial cell | 1.23e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.58e-31 | 15 |
intestinal mucosa | 1.28e-24 | 13 |
wall of intestine | 1.28e-24 | 13 |
gastrointestinal system mucosa | 1.28e-24 | 13 |
intestine | 2.77e-20 | 31 |
organ component layer | 6.60e-19 | 24 |
ileal mucosa | 7.64e-14 | 3 |
ileum | 7.64e-14 | 3 |
mucosa of small intestine | 7.64e-14 | 3 |
wall of small intestine | 7.64e-14 | 3 |
gastrointestinal system | 1.31e-12 | 47 |
epithelium of mucosa | 2.98e-11 | 9 |
gastrointestinal system epithelium | 2.98e-11 | 9 |
intestinal epithelium | 2.98e-11 | 9 |
small intestine | 1.68e-10 | 4 |
simple columnar epithelium | 3.60e-09 | 11 |
gut-associated lymphoid tissue | 1.08e-08 | 2 |
mucosa-associated lymphoid tissue | 1.08e-08 | 2 |
lymphoid tissue | 1.08e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.