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FFCP PHASE1:Mm9::chr10:34138271..34138373,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=319638|HGNC=|MCL_coexpression_id=1507|UniProt=Q8C5P5,E9QN01,Q05AG7|association_with_transcript=0bp_to_ENSMUST00000047885,ENSMUST00000099973,ENSMUST00000105512,ENSMUST00000130290,NM_176968,uc007euv.1,uc007euw.1,uc011xcq.1_5end|description=CAGE_peak_1_at_Nt5dc1_5end|id=chr10:34138271..34138373,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!9.64e-18!193;UBERON:0004120!9.64e-18!193;UBERON:0006603!9.64e-18!193;UBERON:0003104!1.44e-15!131;UBERON:0009142!1.44e-15!131;UBERON:0000077!1.94e-11!97;UBERON:0001041!1.46e-10!92;UBERON:0004119!1.88e-10!130;UBERON:0000925!1.88e-10!130;UBERON:0006595!1.88e-10!130;UBERON:0001007!2.62e-10!128;UBERON:0001555!2.62e-10!128;UBERON:0007026!2.62e-10!128;UBERON:0002405!3.92e-10!70;UBERON:0004921!4.14e-10!126;UBERON:0004185!4.14e-10!126;UBERON:0005057!1.01e-09!51;UBERON:0001004!4.31e-08!42;UBERON:0005911!5.69e-08!69;UBERON:0000065!1.07e-07!41;UBERON:0004177!1.27e-07!29;UBERON:0002193!1.35e-07!48;UBERON:0009569!1.63e-07!66;UBERON:0000490!4.46e-07!66;UBERON:0002390!5.26e-07!45;UBERON:0003061!5.26e-07!45;UBERON:0001048!5.68e-07!147;UBERON:0003408!8.85e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001041,8.99e-13,80;UBERON:0004119,5.26e-12,118;UBERON:0000925,5.26e-12,118;UBERON:0006595,5.26e-12,118;UBERON:0001007,7.21e-12,116;UBERON:0001555,7.21e-12,116;UBERON:0007026,7.21e-12,116;UBERON:0004921,1.13e-11,114;UBERON:0000926,2.29e-08,120;UBERON:0004120,2.29e-08,120;UBERON:0006603,2.29e-08,120;UBERON:0001004,4.31e-08,42;UBERON:0000077,4.49e-08,35;UBERON:0005911,5.69e-08,69;UBERON:0002100,8.55e-08,90;UBERON:0000065,1.07e-07,41;UBERON:0004177,1.27e-07,29;UBERON:0005057,1.27e-07,29;UBERON:0001048,1.33e-07,134;UBERON:0002193,1.35e-07,48;UBERON:0002405,1.35e-07,48;UBERON:0009569,1.63e-07,66;UBERON:0000490,4.46e-07,66;UBERON:0002390,5.26e-07,45;UBERON:0003061,5.26e-07,45;UBERON:0003408,8.85e-07,24|phase1_expression=15.0539916278506,12.563114675017,16.3799726180233,9.98131897312539,9.5170188689806,13.9339795686869,14.7175963575181,73.9876643320232,22.80777298857,30.6624529481811,39.2089147236406,28.7179772383211,67.6242883228263,65.565301814248,24.9832321361747,29.3589137715248,27.9824751251259,49.2120977958851,56.3540322119586,41.1657962244089,29.5100216824212,36.9362338467293,32.9111734315059,22.3989391910769,24.0879745120529,18.9496548157957,14.2151458732495,18.0995835456147,21.2826229791139,18.146169342715,21.2861290229093,19.6859508772486,11.0711661765223,0,20.7973166220918,19.4494535069436,18.3752420636132,118.444451498545,72.6641870407134,101.563606330917,97.6464270131484,99.7246408039331,114.580443315352,40.6646722061115,37.1039568263423,19.8230492334616,9.38869613217647,5.45062890951116,6.81027166476863,8.1660557611199,7.41928034614421,5.75010257459886,37.2477385448175,73.2615763431458,54.4471954610792,13.8920095459411,10.601737277734,17.532851137433,2.02316460859598,1.05798195854407,3.1691570175309,6.09920157724438,6.22506357277798,7.19919773825119,7.9109309005358,5.6838409195688,5.69240209984969,7.68436610643109,3.31806759387129,2.43010688997043,2.3135745748652,3.99911378165325,4.41737081903227,1.95985278743926,1.72521847832825,1.83843757322004,3.30347642998166,4.21368215681119,5.06901559745603,0.923204014111357,1.9212405156506,1.56274011167028,2.79182999001381,5.06486349028512,6.72312290217964,2.94628585473668,4.6982654663704,2.23679334990361,13.8578933799727,14.5853111006096,17.6817338108023,24.0918685554788,24.478968013479,31.3027851149934,39.6363614643078,42.1145273871495,30.1955503283267,28.6322941931137,22.8611684050525,16.606960001986,15.7744630149882,28.2318250311499,5.09610479413291,7.11066703153331,20.7831399370766,17.4818307177818,20.2209778005913,27.5183150122935,87.521004672744,28.5008907004464,11.1030609130327,21.0081180035377,15.912469310668,19.4432206312883,28.691644541112,20.8606541607261,22.7419370315624,40.0540218668155,38.9228642857945,22.8091258425847,24.5134085491037,21.3345111379498,33.550517019262,10.2473278954042,7.95897485891129,25.034791410442,28.6358147569149,21.5964983157627,31.7675567682662,8.08869452786043,10.5225138648284,2.76439574648302,9.38651329038293,8.69432554923124,6.2336413367868,7.62533936418461,18.8402823123085,28.8624171815416,28.5576717030052,42.9301386008407,11.5807194236806,13.104419952708,14.7650946440386,12.0563854268572,19.7986212530364,22.2917873295639,14.4300655821982,30.5269977472039,10.1316956678436,14.3720620927543,16.3634545472472,16.4396799320681,23.6340161841758,18.4573648256748,21.812906459242,13.5343301436575,30.1951670544691,29.852357225307,31.2579849335152,10.5634143993106,12.6644072389792,9.7233513188948,12.7842157216014,13.5767319905709,13.2669717083145,13.9520366850245,15.2915838797783,19.7333428600516,17.4433440908289,23.8042822914688,22.9424731014772,18.4211984155919,28.1024147572545,25.633425983231,12.6173969138476,5.04232600658494,23.4597335918497,20.3626936330929,9.3846830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|EntrezGene=319638
|HGNC=
|MCL_coexpression_id=1507
|UniProt=Q8C5P5,E9QN01,Q05AG7
|association_with_transcript=0bp_to_ENSMUST00000047885,ENSMUST00000099973,ENSMUST00000105512,ENSMUST00000130290,NM_176968,uc007euv.1,uc007euw.1,uc011xcq.1_5end
|description=CAGE_peak_1_at_Nt5dc1_5end
|id=chr10:34138271..34138373,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!9.64e-18!193;UBERON:0004120!9.64e-18!193;UBERON:0006603!9.64e-18!193;UBERON:0003104!1.44e-15!131;UBERON:0009142!1.44e-15!131;UBERON:0000077!1.94e-11!97;UBERON:0001041!1.46e-10!92;UBERON:0004119!1.88e-10!130;UBERON:0000925!1.88e-10!130;UBERON:0006595!1.88e-10!130;UBERON:0001007!2.62e-10!128;UBERON:0001555!2.62e-10!128;UBERON:0007026!2.62e-10!128;UBERON:0002405!3.92e-10!70;UBERON:0004921!4.14e-10!126;UBERON:0004185!4.14e-10!126;UBERON:0005057!1.01e-09!51;UBERON:0001004!4.31e-08!42;UBERON:0005911!5.69e-08!69;UBERON:0000065!1.07e-07!41;UBERON:0004177!1.27e-07!29;UBERON:0002193!1.35e-07!48;UBERON:0009569!1.63e-07!66;UBERON:0000490!4.46e-07!66;UBERON:0002390!5.26e-07!45;UBERON:0003061!5.26e-07!45;UBERON:0001048!5.68e-07!147;UBERON:0003408!8.85e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0001041,8.99e-13,80;UBERON:0004119,5.26e-12,118;UBERON:0000925,5.26e-12,118;UBERON:0006595,5.26e-12,118;UBERON:0001007,7.21e-12,116;UBERON:0001555,7.21e-12,116;UBERON:0007026,7.21e-12,116;UBERON:0004921,1.13e-11,114;UBERON:0000926,2.29e-08,120;UBERON:0004120,2.29e-08,120;UBERON:0006603,2.29e-08,120;UBERON:0001004,4.31e-08,42;UBERON:0000077,4.49e-08,35;UBERON:0005911,5.69e-08,69;UBERON:0002100,8.55e-08,90;UBERON:0000065,1.07e-07,41;UBERON:0004177,1.27e-07,29;UBERON:0005057,1.27e-07,29;UBERON:0001048,1.33e-07,134;UBERON:0002193,1.35e-07,48;UBERON:0002405,1.35e-07,48;UBERON:0009569,1.63e-07,66;UBERON:0000490,4.46e-07,66;UBERON:0002390,5.26e-07,45;UBERON:0003061,5.26e-07,45;UBERON:0003408,8.85e-07,24
|phase1_expression=15.0539916278506,12.563114675017,16.3799726180233,9.98131897312539,9.5170188689806,13.9339795686869,14.7175963575181,73.9876643320232,22.80777298857,30.6624529481811,39.2089147236406,28.7179772383211,67.6242883228263,65.565301814248,24.9832321361747,29.3589137715248,27.9824751251259,49.2120977958851,56.3540322119586,41.1657962244089,29.5100216824212,36.9362338467293,32.9111734315059,22.3989391910769,24.0879745120529,18.9496548157957,14.2151458732495,18.0995835456147,21.2826229791139,18.146169342715,21.2861290229093,19.6859508772486,11.0711661765223,0,20.7973166220918,19.4494535069436,18.3752420636132,118.444451498545,72.6641870407134,101.563606330917,97.6464270131484,99.7246408039331,114.580443315352,40.6646722061115,37.1039568263423,19.8230492334616,9.38869613217647,5.45062890951116,6.81027166476863,8.1660557611199,7.41928034614421,5.75010257459886,37.2477385448175,73.2615763431458,54.4471954610792,13.8920095459411,10.601737277734,17.532851137433,2.02316460859598,1.05798195854407,3.1691570175309,6.09920157724438,6.22506357277798,7.19919773825119,7.9109309005358,5.6838409195688,5.69240209984969,7.68436610643109,3.31806759387129,2.43010688997043,2.3135745748652,3.99911378165325,4.41737081903227,1.95985278743926,1.72521847832825,1.83843757322004,3.30347642998166,4.21368215681119,5.06901559745603,0.923204014111357,1.9212405156506,1.56274011167028,2.79182999001381,5.06486349028512,6.72312290217964,2.94628585473668,4.6982654663704,2.23679334990361,13.8578933799727,14.5853111006096,17.6817338108023,24.0918685554788,24.478968013479,31.3027851149934,39.6363614643078,42.1145273871495,30.1955503283267,28.6322941931137,22.8611684050525,16.606960001986,15.7744630149882,28.2318250311499,5.09610479413291,7.11066703153331,20.7831399370766,17.4818307177818,20.2209778005913,27.5183150122935,87.521004672744,28.5008907004464,11.1030609130327,21.0081180035377,15.912469310668,19.4432206312883,28.691644541112,20.8606541607261,22.7419370315624,40.0540218668155,38.9228642857945,22.8091258425847,24.5134085491037,21.3345111379498,33.550517019262,10.2473278954042,7.95897485891129,25.034791410442,28.6358147569149,21.5964983157627,31.7675567682662,8.08869452786043,10.5225138648284,2.76439574648302,9.38651329038293,8.69432554923124,6.2336413367868,7.62533936418461,18.8402823123085,28.8624171815416,28.5576717030052,42.9301386008407,11.5807194236806,13.104419952708,14.7650946440386,12.0563854268572,19.7986212530364,22.2917873295639,14.4300655821982,30.5269977472039,10.1316956678436,14.3720620927543,16.3634545472472,16.4396799320681,23.6340161841758,18.4573648256748,21.812906459242,13.5343301436575,30.1951670544691,29.852357225307,31.2579849335152,10.5634143993106,12.6644072389792,9.7233513188948,12.7842157216014,13.5767319905709,13.2669717083145,13.9520366850245,15.2915838797783,19.7333428600516,17.4433440908289,23.8042822914688,22.9424731014772,18.4211984155919,28.1024147572545,25.633425983231,12.6173969138476,5.04232600658494,23.4597335918497,20.3626936330929,9.38468302355029,9.28946687441754,14.6908905907186,20.5717195115809,19.7916459021935,18.2616601068057,20.404749646414,24.0460473897056,23.3741744184251,29.2466013900492,24.9554031512474,15.2799299471218,27.6656703839609,27.4814957091027,11.0007382552787,15.8805432527523,27.0498565615393,19.7541788009955,19.2012962295949,28.0543279561274,35.0330415668385,45.0210951337787,43.3316488842194,51.4566173553908,42.9856309276366,18.8534969459186,16.7075145846223,17.9889689907883,15.8230894683032,18.3294641411837,16.2960545140109,15.8232875597946,28.2115294588562,27.4561413188081,31.629005436018,29.7712758134803,23.7148631567066,35.6136217905428,37.1352645990358,44.3848039654298,41.5694677874861,10.8010104709176,14.5038829033403,16.9745085775188,19.9486711045227,24.1209010716215,27.1369750610056,26.147908812945,38.3053400178044,35.6558150334528,28.8613131270052,37.8524256993355,39.5448608472901,34.1371778252367,25.6345182696763,22.3001330365671,22.1293922858566,31.4567890787395,11.0779907091576,8.32202974804643,16.8852993737976,31.3063949733423,10.4117712407365,10.1514073517126,14.8642144435631,12.4263774935327,11.8083297263669,12.7384438854975,15.382806663646,8.76767573733936,8.30104333687699,6.74774764485795,28.3880170416537,9.43747699436453,18.4062264069541,28.5398312742486,13.2745138339963,16.9946445308487,12.6975893925195,12.6365403436452,7.38254732201932,13.2197113615889,22.4832615056352,18.5402202033528,21.746340081468,19.9103157499564,26.3546521437497,14.4389760547462,30.6395645178409,12.784337676223,8.79639049722731,11.1455258216428,14.3645589250242,13.7343989553594,12.5057255657612,10.9607381681256,20.8857820176702,23.3015277950202,20.5091410191115,29.5146392765249,31.0011699256139,31.3024080377129,29.2462242807684,33.8130253474826,24.7758711135373,7.97328798645192,30.5858876628156,19.4003655885429,26.6680119412385,39.3690075139804,35.5404992074665,31.3426097292936,50.1436368481873,51.6420859074298,49.4755906219837,40.0961659566348,9.96458379780576,15.8589184358942,19.3329560071024,18.3997700492732,19.2159056096636,31.6931214004329,33.9705703031131,32.9812486899877,36.8106524148692,39.7657160375632,99.2099572084175,14.8021380583539,12.9057622556536,13.4171319957393,11.7535439364735,18.4162176784948,28.165737274981,22.9159717325352,26.6342734841306,54.8395954275034,66.5349314455669,52.4578460242776,14.798940716182,24.0343639765696,25.33456048067,30.7925916548068,32.3850608293462,39.7846937911097,43.5684105165003,46.4445669761479,47.5530473527199,50.5139187535571,48.5340246083967,42.1407866384643,64.7498038085892,26.7541852665949,15.9829886429327,17.3147743256288,13.7665385418544,39.4106771825669,25.9001816122631,30.403169628366,39.01504499239,28.5896099300157,1.6942555278512,5.06357760157895,4.58316410751517,4.98374228796694,6.16574267793578,3.7769694869485,9.45031500324528,4.5032120322422,4.98456649882625,8.28416498802912,4.8780053364563,10.3746467084268,11.7806187970353,12.6415492875513,8.59413966774727,9.37601893095072,15.3350242183115,14.4224540067226,14.4413644316317,15.6672271293554,17.2365923925363,14.9014809695,12.0797544636148,13.7654077670469,12.8081095771018,14.2888107384922,12.3996228760995,12.1532808892134,13.1867488257058,13.5423006523646,22.6293706574374,12.7782580434723,12.3986818772607,16.2787986628208,13.9281883014689,14.8075563810434,14.451309856949,14.4688341290814,13.4446072707403,21.8845485946518,14.9480122836459,13.1010961559499,15.9600106836179,13.3245683419931,18.1332214322273,10.9916654292696,22.2235028023138,25.9993975398441,24.484906504812,20.2944105589954,31.7658934799977
|short_description=p1@Nt5dc1
}}

Revision as of 16:38, 12 September 2013

Short description:p1@Nt5dc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nt5dc1_5end
Coexpression cluster:MCL_coexpression_mm9:1507
Association with transcript: 0bp_to_ENSMUST00000047885, ENSMUST00000099973, ENSMUST00000105512, ENSMUST00000130290, NM_176968, uc007euv.1, uc007euw.1, uc011xcq.1_5end
EntrezGene:Nt5dc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nt5dc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.93
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.72
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E973.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F230.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E639.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F128.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E467.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E865.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.36
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.98
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A249.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A456.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A641.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H236.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.91
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D122.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D224.09
GP2+ M cell, pool1.CNhs13228.11845-124H918.95
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I218.10
Ileum epithelium, pool1.CNhs13199.10252-104B921.28
Ileum epithelium, pool2.CNhs13232.10253-104C118.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C821.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.45
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8118.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H172.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3101.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G997.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H299.72
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4114.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D840.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D937.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.82
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A237.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I973.26
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A154.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.53
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D913.86
Mouse Schwann, donor2.CNhs12573.11746-123F914.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C424.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C831.30
Mouse hepatocyte, donor6.CNhs13090.11822-124F439.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F642.11
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.52
accessory axillary lymph node, adult.CNhs10475.1063-29H987.52
adrenal gland, adult.CNhs10508.49-24D728.50
adrenal gland, embryo E14.CNhs11038.406-44C511.10
adrenal gland, embryo E16.CNhs11004.1254-43D621.01
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F519.44
adrenal gland, neonate N00.CNhs11191.1311-23C128.69
adrenal gland, neonate N25.CNhs11223.1377-27I320.86
amnion, adult pregnant day17.5.CNhs10488.583-22A822.74
aorta, adult.CNhs10498.46-23H140.05
bone (os femoris), adult.CNhs10483.56-12G238.92
bone (os femoris), neonate N02.CNhs11227.1985-43F522.81
bone (os femoris), neonate N16.CNhs11225.1525-43A624.51
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H725.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.77
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.86
epididymis, adult.CNhs10490.58-23B228.56
eyeball, adult.CNhs10484.31-12G442.93
eyeball, embryo E12.CNhs11016.345-16C611.58
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C914.77
eyeball, embryo E17.CNhs11023.1261-18D412.06
eyeball, neonate N00.CNhs11207.633-15C619.80
eyeball, neonate N01.CNhs11140.1532-43E722.29
eyeball, neonate N02.CNhs11205.1551-44G814.43
eyeball, neonate N16.CNhs11188.777-19A230.53
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H214.37
forelimb, embryo E13.CNhs10589.384-1E216.36
forelimb, embryo E14.CNhs10577.413-26A816.44
forelimb, embryo E15.CNhs11007.437-20E723.63
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B521.81
gonad, embryo E13.CNhs11044.1564-45I613.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C830.20
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D229.85
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D531.26
heart, embryo E11.CNhs10586.331-24E910.56
heart, embryo E12.CNhs11015.353-12F512.66
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C813.58
heart, embryo E16.CNhs11021.457-17C613.27
heart, embryo E17.CNhs11025.479-18E513.95
heart, embryo E18.CNhs11030.1283-20G315.29
heart, neonate N00.CNhs11213.639-21E319.73
heart, neonate N03.CNhs11221.1349-25I217.44
heart, neonate N10.CNhs11118.749-24G123.80
heart, neonate N16.CNhs11209.782-15G122.94
heart, neonate N20.CNhs11127.821-26I618.42
heart, neonate N25.CNhs11196.1351-25D328.10
heart, neonate N30.CNhs11202.1390-42D225.63
hippocampus, adult.CNhs10478.13-16E812.62
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I323.46
intestine, adult.CNhs10496.178-9A320.36
intestine, embryo E12.CNhs11019.1251-16I59.38
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D814.69
intestine, embryo E16.CNhs10585.463-22H420.57
intestine, embryo E17.CNhs10582.482-18D319.79
intestine, embryo E18.CNhs10526.1289-20F718.26
intestine, neonate N00.CNhs11126.644-26D120.40
intestine, neonate N01.CNhs11192.1322-23E924.05
intestine, neonate N06.CNhs11102.688-20B823.37
intestine, neonate N07.CNhs11095.720-20F229.25
intestine, neonate N10.CNhs11098.755-23A524.96
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E327.67
intestine, neonate N30.CNhs11131.1384-42G127.48
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F815.88
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I219.75
kidney, embryo E18.CNhs11001.1288-20C719.20
kidney, neonate N00.CNhs11214.646-21G728.05
kidney, neonate N10.CNhs11206.758-6D535.03
kidney, neonate N20.CNhs11113.832-19I145.02
kidney, neonate N25.CNhs11122.1353-25F343.33
kidney, neonate N30.CNhs11203.1385-42H151.46
liver, adult pregnant day01.CNhs10466.508-5B242.99
liver, embryo E12.CNhs10601.355-15F818.85
liver, embryo E13.CNhs10524.378-3H616.71
liver, embryo E14.CNhs10594.409-16E117.99
liver, embryo E15.CNhs10520.433-16D715.82
liver, embryo E16.CNhs10523.462-17F518.33
liver, embryo E17.CNhs10510.481-18A316.30
liver, embryo E18.CNhs10579.499-43G415.82
liver, neonate N00.CNhs11117.641-24F428.21
liver, neonate N03.CNhs11123.1345-25G227.46
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H229.77
liver, neonate N10.CNhs11115.751-24B923.71
liver, neonate N20.CNhs11220.823-25A335.61
liver, neonate N25.CNhs11198.1368-26H137.14
liver, neonate N30.CNhs11106.1382-42D144.38
lung, adult.CNhs10474.28-22B141.57
lung, embryo E12.CNhs10522.354-16G210.80
lung, embryo E14.CNhs10604.404-26F814.50
lung, embryo E15.CNhs11020.432-17C516.97
lung, embryo E16.CNhs10998.458-17B619.95
lung, embryo E17.CNhs10605.480-44A624.12
lung, embryo E18.CNhs10583.1287-20I627.14
lung, neonate N00.CNhs11224.640-42C626.15
lung, neonate N06.CNhs11212.683-20E538.31
lung, neonate N07.CNhs11111.715-19A335.66
lung, neonate N10.CNhs11219.750-23E628.86
lung, neonate N20.CNhs11109.822-18A437.85
lung, neonate N25.CNhs11119.1359-25C739.54
lung, neonate N30.CNhs11133.1394-42H234.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A122.30
mammary gland, adult lactating day02.CNhs10480.595-22B622.13
mammary gland, adult pregnant day19.CNhs10476.588-5H231.46
medulla oblongata, adult.CNhs10477.17-12C211.08
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C231.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I728.39
ovary, embryo E18.CNhs11040.505-44H79.44
ovary, neonate N00.CNhs11217.1299-22I418.41
oviduct, adult pregnant day01.CNhs10500.988-6G628.54
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F212.70
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G922.48
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B619.91
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G830.64
pituitary gland, embryo E12.CNhs11018.346-16E612.78
pituitary gland, embryo E13.CNhs11009.370-44C78.80
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B914.36
pituitary gland, embryo E16.CNhs11036.449-43F613.73
pituitary gland, embryo E17.CNhs11039.1265-44F512.51
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I720.89
placenta, adult pregnant day17.CNhs10464.577-18G323.30
prostate, adult.CNhs10470.859-1F820.51
skin, adult.CNhs10492.30-1C329.51
skin, neonate N00.CNhs11124.650-25G431.00
skin, neonate N03.CNhs11215.662-22H331.30
skin, neonate N06.CNhs11097.693-20I529.25
skin, neonate N10.CNhs11108.762-6C433.81
small intestine, neonate N16.CNhs11114.790-21I124.78
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G230.59
spleen, embryo E16.CNhs11035.461-43C119.40
spleen, embryo E18.CNhs11011.1271-21F226.67
spleen, neonate N10.CNhs11116.752-24D139.37
spleen, neonate N20.CNhs11112.824-19H135.54
spleen, neonate N25.CNhs11099.1354-25G331.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C650.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C951.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.48
stomach, adult.CNhs10503.33-1H640.10
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G815.86
stomach, embryo E16.CNhs11022.459-17D419.33
stomach, embryo E17.CNhs11006.1035-18D518.40
stomach, embryo E18.CNhs10999.1286-20C619.22
stomach, neonate N03.CNhs11193.1340-24B831.69
stomach, neonate N07.CNhs11210.718-18A933.97
stomach, neonate N25.CNhs11104.1355-25E432.98
stomach, neonate N30.CNhs11134.1386-42I136.81
submandibular gland, adult.CNhs10469.59-29C139.77
testis, adult.CNhs10504.57-7G599.21
testis, embryo E13.CNhs11031.389-23F514.80
testis, embryo E15.CNhs11034.443-27C512.91
testis, embryo E16.CNhs11033.470-26G513.42
testis, embryo E17.CNhs11029.486-18I511.75
testis, embryo E18.CNhs11027.503-18G518.42
testis, neonate N00.CNhs11189.1300-22B728.17
testis, neonate N07.CNhs11222.726-26I422.92
testis, neonate N10.CNhs11204.763-44D926.63
testis, neonate N20.CNhs11110.839-18H354.84
testis, neonate N30.CNhs11130.1391-42E266.53
thymus, adult.CNhs10471.38-12B552.46
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I224.03
thymus, embryo E16.CNhs11002.456-26C525.33
thymus, embryo E17.CNhs10581.478-18C130.79
thymus, embryo E18.CNhs10595.1273-19G432.39
thymus, neonate N02.CNhs11181.1541-43F839.78
thymus, neonate N03.CNhs11137.2104-43C743.57
thymus, neonate N06.CNhs11197.681-26C446.44
thymus, neonate N07.CNhs11211.713-19D347.55
thymus, neonate N10.CNhs11194.748-24E450.51
thymus, neonate N20.CNhs11186.820-7A248.53
thymus, neonate N25.CNhs11125.1362-25G742.14
thymus, neonate N30.CNhs11132.1393-42G264.75
tongue, adult.CNhs10499.32-1B426.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.77
urinary bladder, adult.CNhs10481.879-12E439.41
uterus, adult pregnant day19.CNhs10497.590-15F525.90
uterus, adult.CNhs10509.92-27E530.40
vagina, adult.CNhs10502.89-27D539.02
vesicular gland, adult.CNhs10491.51-27F828.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I84.88
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H211.78
whole body, embryo E14.5.CNhs10578.420-27D212.64
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.88
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.32
whole body, embryo E17.5.CNhs10513.490-9F918.13
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B322.22
whole body, neonate N00.CNhs10525.657-19C226.00
whole body, neonate N01.CNhs10576.659-23C624.48
whole body, neonate N06.CNhs10515.692-21D120.29
whole body, neonate N10.CNhs10518.761-6B431.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
foregut8.99e-1380
endoderm-derived structure5.26e-12118
endoderm5.26e-12118
presumptive endoderm5.26e-12118
digestive system7.21e-12116
digestive tract7.21e-12116
primitive gut7.21e-12116
subdivision of digestive tract1.13e-11114
mesoderm2.29e-08120
mesoderm-derived structure2.29e-08120
presumptive mesoderm2.29e-08120
respiratory system4.31e-0842
mixed endoderm/mesoderm-derived structure4.49e-0835
endo-epithelium5.69e-0869
trunk8.55e-0890
respiratory tract1.07e-0741
hemopoietic organ1.27e-0729
immune organ1.27e-0729
primordium1.33e-07134
hemolymphoid system1.35e-0748
immune system1.35e-0748
subdivision of trunk1.63e-0766
unilaminar epithelium4.46e-0766
hematopoietic system5.26e-0745
blood island5.26e-0745
gland of gut8.85e-0724







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