FFCP PHASE1:Mm9::chr2:74517725..74517738,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15431|HGNC=|UniProt=|association_with_transcript=276bp_to_ENSMUST00000048086_5end|description=CAGE_peak_5_at_Hoxd11_5end|id=chr2:74517725..74517738,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!3.53e-19!21;UBERON:0001008!2.43e-14!17;UBERON:0006554!2.46e-13!16;UBERON:0005156!4.94e-12!26;UBERON:0000990!4.94e-12!26;UBERON:0002113!1.35e-11!14;UBERON:0003918!1.35e-11!14;UBERON:0005095!1.35e-11!14;UBERON:0007687!1.35e-11!14;UBERON:0003133!1.29e-10!24;UBERON:0000474!1.30e-10!9;UBERON:0003134!1.08e-09!8;UBERON:0002102!1.76e-08!8;UBERON:0004710!1.76e-08!8;UBERON:0005419!1.76e-08!8;UBERON:0005417!1.76e-08!8;UBERON:0005729!1.76e-08!8;UBERON:0003100!3.35e-08!11;UBERON:0002240!7.20e-08!6;UBERON:0005174!7.20e-08!6;UBERON:0001137!7.20e-08!6;UBERON:0000991!7.38e-07!18;UBERON:0005564!7.38e-07!18;UBERON:0003975!9.34e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.14e-37,21;UBERON:0001008,1.69e-30,19;UBERON:0006554,6.68e-28,18;UBERON:0002113,7.59e-26,14;UBERON:0003918,7.59e-26,14;UBERON:0011143,7.59e-26,14;UBERON:0005095,7.59e-26,14;UBERON:0007687,7.59e-26,14;UBERON:0003103,1.39e-16,43;UBERON:0003134,2.60e-14,8;UBERON:0000474,1.17e-12,9;UBERON:0003975,1.03e-10,5;UBERON:0002102,1.46e-10,7;UBERON:0004710,1.46e-10,7;UBERON:0005419,1.46e-10,7;UBERON:0005417,1.46e-10,7;UBERON:0005729,1.46e-10,7;UBERON:0003100,3.02e-10,11;UBERON:0002240,1.10e-09,6;UBERON:0005174,1.10e-09,6;UBERON:0001137,1.10e-09,6;UBERON:0010708,3.24e-09,8;UBERON:0004175,6.48e-09,9;UBERON:0005795,3.89e-08,4;UBERON:0000995,3.89e-08,4;UBERON:0001948,5.24e-07,5;UBERON:0002315,5.24e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,4.63823935998388,0,0,0,0,0,0,0,0,0,0,0,0,3.53554302568401,4.12877874317399,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0,0,0,0,0,0,0,0,0,0,0,1.29340795759705,1.32374256117473,0.527853372491847,1.53437012699302,0.278047249225598,1.74126083261083,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853153002140936,0.232236671860439,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,2.0863469104839,1.94222471436539,2.25415471346161,2.24016460629846,2.71533482034676,3.22624771495465,3.28829993046138,1.47610147979602,1.255989822731,1.23397163921801,0,0.333690211432188,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,2.31485284767432,1.95464351224291,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.63549621259146,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0.129159823477731,0.506868376472335,0.234714477291508,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86379188064381,2.25218970541418,4.76194223094889,1.50057865355346,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.59609949360412,0.170733605754134,0,0,0.183843508450014,0.888986911206461,0,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0.376437521661322,0.423073039458382,0,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0.765153328275374,0,0.695603506861264|short_description=p5@Hoxd11}} | ||
|EntrezGene=15431 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=276bp_to_ENSMUST00000048086_5end | |||
|description=CAGE_peak_5_at_Hoxd11_5end | |||
|id=chr2:74517725..74517738,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!3.53e-19!21;UBERON:0001008!2.43e-14!17;UBERON:0006554!2.46e-13!16;UBERON:0005156!4.94e-12!26;UBERON:0000990!4.94e-12!26;UBERON:0002113!1.35e-11!14;UBERON:0003918!1.35e-11!14;UBERON:0005095!1.35e-11!14;UBERON:0007687!1.35e-11!14;UBERON:0003133!1.29e-10!24;UBERON:0000474!1.30e-10!9;UBERON:0003134!1.08e-09!8;UBERON:0002102!1.76e-08!8;UBERON:0004710!1.76e-08!8;UBERON:0005419!1.76e-08!8;UBERON:0005417!1.76e-08!8;UBERON:0005729!1.76e-08!8;UBERON:0003100!3.35e-08!11;UBERON:0002240!7.20e-08!6;UBERON:0005174!7.20e-08!6;UBERON:0001137!7.20e-08!6;UBERON:0000991!7.38e-07!18;UBERON:0005564!7.38e-07!18;UBERON:0003975!9.34e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.14e-37,21;UBERON:0001008,1.69e-30,19;UBERON:0006554,6.68e-28,18;UBERON:0002113,7.59e-26,14;UBERON:0003918,7.59e-26,14;UBERON:0011143,7.59e-26,14;UBERON:0005095,7.59e-26,14;UBERON:0007687,7.59e-26,14;UBERON:0003103,1.39e-16,43;UBERON:0003134,2.60e-14,8;UBERON:0000474,1.17e-12,9;UBERON:0003975,1.03e-10,5;UBERON:0002102,1.46e-10,7;UBERON:0004710,1.46e-10,7;UBERON:0005419,1.46e-10,7;UBERON:0005417,1.46e-10,7;UBERON:0005729,1.46e-10,7;UBERON:0003100,3.02e-10,11;UBERON:0002240,1.10e-09,6;UBERON:0005174,1.10e-09,6;UBERON:0001137,1.10e-09,6;UBERON:0010708,3.24e-09,8;UBERON:0004175,6.48e-09,9;UBERON:0005795,3.89e-08,4;UBERON:0000995,3.89e-08,4;UBERON:0001948,5.24e-07,5;UBERON:0002315,5.24e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,4.63823935998388,0,0,0,0,0,0,0,0,0,0,0,0,3.53554302568401,4.12877874317399,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0,0,0,0,0,0,0,0,0,0,0,1.29340795759705,1.32374256117473,0.527853372491847,1.53437012699302,0.278047249225598,1.74126083261083,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853153002140936,0.232236671860439,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,2.0863469104839,1.94222471436539,2.25415471346161,2.24016460629846,2.71533482034676,3.22624771495465,3.28829993046138,1.47610147979602,1.255989822731,1.23397163921801,0,0.333690211432188,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,2.31485284767432,1.95464351224291,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.63549621259146,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0.129159823477731,0.506868376472335,0.234714477291508,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86379188064381,2.25218970541418,4.76194223094889,1.50057865355346,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.59609949360412,0.170733605754134,0,0,0.183843508450014,0.888986911206461,0,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0.376437521661322,0.423073039458382,0,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0.765153328275374,0,0.695603506861264 | |||
|short_description=p5@Hoxd11 | |||
}} |
Revision as of 00:32, 14 September 2013
Short description: | p5@Hoxd11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Hoxd11_5end |
Coexpression cluster: | NA |
Association with transcript: | 276bp_to_ENSMUST00000048086_5end |
EntrezGene: | Hoxd11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 2.14e-37 | 21 |
renal system | 1.69e-30 | 19 |
urinary system structure | 6.68e-28 | 18 |
kidney | 7.59e-26 | 14 |
kidney mesenchyme | 7.59e-26 | 14 |
upper urinary tract | 7.59e-26 | 14 |
kidney rudiment | 7.59e-26 | 14 |
kidney field | 7.59e-26 | 14 |
compound organ | 1.39e-16 | 43 |
female reproductive organ | 2.60e-14 | 8 |
female reproductive system | 1.17e-12 | 9 |
internal female genitalia | 1.03e-10 | 5 |
forelimb | 1.46e-10 | 7 |
pectoral appendage | 1.46e-10 | 7 |
pectoral appendage bud | 1.46e-10 | 7 |
forelimb bud | 1.46e-10 | 7 |
forelimb/pectoral fin field | 1.46e-10 | 7 |
female organism | 3.02e-10 | 11 |
spinal cord | 1.10e-09 | 6 |
dorsal region element | 1.10e-09 | 6 |
dorsum | 1.10e-09 | 6 |
pectoral complex | 3.24e-09 | 8 |
internal genitalia | 6.48e-09 | 9 |
embryonic uterus | 3.89e-08 | 4 |
uterus | 3.89e-08 | 4 |
regional part of spinal cord | 5.24e-07 | 5 |
gray matter of spinal cord | 5.24e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.