FFCP PHASE1:Mm9::chr11:70272480..70272491,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=574428|HGNC=|MCL_coexpression_id=1300|UniProt=F6QSN8|association_with_transcript=-443bp_to_ENSMUST00000108563_5end|description=CAGE_peak_9_at_Zmynd15_5end|id=chr11:70272480..70272491,+|ontology_enrichment_celltype=CL:0000066!6.24e-27!25;CL:0002076!1.06e-25!15;CL:0002563!3.99e-25!9;CL:0002251!3.99e-25!9;CL:0000223!3.25e-22!20;CL:0000239!7.31e-18!6;CL:0000677!7.31e-18!6;CL:0000212!7.31e-18!6;CL:0000584!7.31e-18!6;CL:0000075!3.30e-15!7;CL:0000473!9.86e-10!3;CL:0000627!9.86e-10!3;CL:0000682!9.86e-10!3;CL:0000068!4.07e-09!3;CL:0002202!4.07e-09!3;CL:0000069!4.07e-09!3;CL:0002632!4.07e-09!3;CL:0002368!4.07e-09!3;CL:0000307!4.07e-09!3;CL:0000377!4.07e-09!3;CL:0002250!7.62e-09!3;CL:0000063!5.90e-08!66|ontology_enrichment_celltype_v019_2=CL:0000066,6.60e-38,25;CL:0000239,1.25e-33,6;CL:0000677,1.25e-33,6;CL:0000584,1.25e-33,6;CL:0002563,8.24e-32,9;CL:0002251,8.24e-32,9;CL:0000075,7.29e-29,7;CL:0002076,1.02e-25,15;CL:0000223,3.27e-25,20;CL:0000682,2.83e-24,3;CL:0000473,8.57e-11,7;CL:0000213,9.82e-10,1;CL:0002078,9.82e-10,1;CL:0000115,9.82e-10,1;CL:0002262,9.82e-10,1;CL:1000398,9.82e-10,1;CL:0002321,7.88e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.60e-30!15;UBERON:0003350!3.99e-25!9;UBERON:0004808!3.99e-25!9;UBERON:0001277!3.99e-25!9;UBERON:0001242!4.96e-25!13;UBERON:0000060!4.96e-25!13;UBERON:0001262!4.96e-25!13;UBERON:0004786!4.96e-25!13;UBERON:0004923!1.42e-20!24;UBERON:0000485!2.99e-20!11;UBERON:0003126!4.07e-09!3;UBERON:0001005!4.07e-09!3;UBERON:0007196!4.07e-09!3;UBERON:0001558!4.07e-09!3;UBERON:0000064!4.24e-09!99;UBERON:0001007!1.52e-07!128;UBERON:0001555!1.52e-07!128;UBERON:0007026!1.52e-07!128;UBERON:0004119!2.38e-07!130;UBERON:0000925!2.38e-07!130;UBERON:0006595!2.38e-07!130;UBERON:0003929!3.38e-07!55;UBERON:0005911!5.62e-07!69;UBERON:0001962!9.88e-07!2;UBERON:0001961!9.88e-07!2;UBERON:0001744!9.88e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.24e-32,9;UBERON:0004808,8.24e-32,9;UBERON:0001277,8.24e-32,9;UBERON:0000485,4.96e-26,11;UBERON:0001242,5.04e-22,13;UBERON:0001262,5.04e-22,13;UBERON:0004786,5.04e-22,13;UBERON:0000344,4.42e-19,15;UBERON:0004923,6.98e-12,24;UBERON:0002394,9.82e-10,1;UBERON:0001281,9.82e-10,1;UBERON:0000353,9.82e-10,1;UBERON:0003497,9.82e-10,1;UBERON:0003909,9.82e-10,1;UBERON:0003928,9.82e-10,1;UBERON:0003835,9.82e-10,1;UBERON:0003513,9.82e-10,1;UBERON:0001280,9.82e-10,1;UBERON:0004647,9.82e-10,1;UBERON:0002294,9.82e-10,1;UBERON:0001173,9.82e-10,1;UBERON:0004912,9.82e-10,1;UBERON:0005171,9.82e-10,1;UBERON:0000160,3.71e-09,31;UBERON:0003929,8.02e-07,55|phase1_expression=0,3.83872948403297,3.63999391511629,0.30246421130683,1.00179145989269,3.69334398206158,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,0.45881856213434,2.29692785646008,1.29228598847722,2.15471232685889,0,0.252030129759931,0.443461021310609,0,0,0,1.1554064790051,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63783181922684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.292373642219257,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Zmynd15}} | ||
|EntrezGene=574428 | |||
|HGNC= | |||
|MCL_coexpression_id=1300 | |||
|UniProt=F6QSN8 | |||
|association_with_transcript=-443bp_to_ENSMUST00000108563_5end | |||
|description=CAGE_peak_9_at_Zmynd15_5end | |||
|id=chr11:70272480..70272491,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.24e-27!25;CL:0002076!1.06e-25!15;CL:0002563!3.99e-25!9;CL:0002251!3.99e-25!9;CL:0000223!3.25e-22!20;CL:0000239!7.31e-18!6;CL:0000677!7.31e-18!6;CL:0000212!7.31e-18!6;CL:0000584!7.31e-18!6;CL:0000075!3.30e-15!7;CL:0000473!9.86e-10!3;CL:0000627!9.86e-10!3;CL:0000682!9.86e-10!3;CL:0000068!4.07e-09!3;CL:0002202!4.07e-09!3;CL:0000069!4.07e-09!3;CL:0002632!4.07e-09!3;CL:0002368!4.07e-09!3;CL:0000307!4.07e-09!3;CL:0000377!4.07e-09!3;CL:0002250!7.62e-09!3;CL:0000063!5.90e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.60e-38,25;CL:0000239,1.25e-33,6;CL:0000677,1.25e-33,6;CL:0000584,1.25e-33,6;CL:0002563,8.24e-32,9;CL:0002251,8.24e-32,9;CL:0000075,7.29e-29,7;CL:0002076,1.02e-25,15;CL:0000223,3.27e-25,20;CL:0000682,2.83e-24,3;CL:0000473,8.57e-11,7;CL:0000213,9.82e-10,1;CL:0002078,9.82e-10,1;CL:0000115,9.82e-10,1;CL:0002262,9.82e-10,1;CL:1000398,9.82e-10,1;CL:0002321,7.88e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.60e-30!15;UBERON:0003350!3.99e-25!9;UBERON:0004808!3.99e-25!9;UBERON:0001277!3.99e-25!9;UBERON:0001242!4.96e-25!13;UBERON:0000060!4.96e-25!13;UBERON:0001262!4.96e-25!13;UBERON:0004786!4.96e-25!13;UBERON:0004923!1.42e-20!24;UBERON:0000485!2.99e-20!11;UBERON:0003126!4.07e-09!3;UBERON:0001005!4.07e-09!3;UBERON:0007196!4.07e-09!3;UBERON:0001558!4.07e-09!3;UBERON:0000064!4.24e-09!99;UBERON:0001007!1.52e-07!128;UBERON:0001555!1.52e-07!128;UBERON:0007026!1.52e-07!128;UBERON:0004119!2.38e-07!130;UBERON:0000925!2.38e-07!130;UBERON:0006595!2.38e-07!130;UBERON:0003929!3.38e-07!55;UBERON:0005911!5.62e-07!69;UBERON:0001962!9.88e-07!2;UBERON:0001961!9.88e-07!2;UBERON:0001744!9.88e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.24e-32,9;UBERON:0004808,8.24e-32,9;UBERON:0001277,8.24e-32,9;UBERON:0000485,4.96e-26,11;UBERON:0001242,5.04e-22,13;UBERON:0001262,5.04e-22,13;UBERON:0004786,5.04e-22,13;UBERON:0000344,4.42e-19,15;UBERON:0004923,6.98e-12,24;UBERON:0002394,9.82e-10,1;UBERON:0001281,9.82e-10,1;UBERON:0000353,9.82e-10,1;UBERON:0003497,9.82e-10,1;UBERON:0003909,9.82e-10,1;UBERON:0003928,9.82e-10,1;UBERON:0003835,9.82e-10,1;UBERON:0003513,9.82e-10,1;UBERON:0001280,9.82e-10,1;UBERON:0004647,9.82e-10,1;UBERON:0002294,9.82e-10,1;UBERON:0001173,9.82e-10,1;UBERON:0004912,9.82e-10,1;UBERON:0005171,9.82e-10,1;UBERON:0000160,3.71e-09,31;UBERON:0003929,8.02e-07,55 | |||
|phase1_expression=0,3.83872948403297,3.63999391511629,0.30246421130683,1.00179145989269,3.69334398206158,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,0.45881856213434,2.29692785646008,1.29228598847722,2.15471232685889,0,0.252030129759931,0.443461021310609,0,0,0,1.1554064790051,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63783181922684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.292373642219257,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Zmynd15 | |||
}} |
Revision as of 20:44, 12 September 2013
Short description: | p9@Zmynd15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Zmynd15_5end |
Coexpression cluster: | MCL_coexpression_mm9:1300 |
Association with transcript: | -443bp_to_ENSMUST00000108563_5end |
EntrezGene: | Zmynd15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.60e-38 | 25 |
brush border epithelial cell | 1.25e-33 | 6 |
gut absorptive cell | 1.25e-33 | 6 |
enterocyte | 1.25e-33 | 6 |
intestinal epithelial cell | 8.24e-32 | 9 |
epithelial cell of alimentary canal | 8.24e-32 | 9 |
columnar/cuboidal epithelial cell | 7.29e-29 | 7 |
endo-epithelial cell | 1.02e-25 | 15 |
endodermal cell | 3.27e-25 | 20 |
M cell of gut | 2.83e-24 | 3 |
defensive cell | 8.57e-11 | 7 |
lining cell | 9.82e-10 | 1 |
meso-epithelial cell | 9.82e-10 | 1 |
endothelial cell | 9.82e-10 | 1 |
endothelial cell of sinusoid | 9.82e-10 | 1 |
endothelial cell of hepatic sinusoid | 9.82e-10 | 1 |
embryonic cell | 7.88e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.24e-32 | 9 |
gastrointestinal system epithelium | 8.24e-32 | 9 |
intestinal epithelium | 8.24e-32 | 9 |
simple columnar epithelium | 4.96e-26 | 11 |
intestinal mucosa | 5.04e-22 | 13 |
wall of intestine | 5.04e-22 | 13 |
gastrointestinal system mucosa | 5.04e-22 | 13 |
mucosa | 4.42e-19 | 15 |
organ component layer | 6.98e-12 | 24 |
bile duct | 9.82e-10 | 1 |
hepatic sinusoid | 9.82e-10 | 1 |
parenchyma | 9.82e-10 | 1 |
abdomen blood vessel | 9.82e-10 | 1 |
sinusoid | 9.82e-10 | 1 |
digestive system duct | 9.82e-10 | 1 |
abdominal segment blood vessel | 9.82e-10 | 1 |
trunk blood vessel | 9.82e-10 | 1 |
liver parenchyma | 9.82e-10 | 1 |
liver lobule | 9.82e-10 | 1 |
biliary system | 9.82e-10 | 1 |
biliary tree | 9.82e-10 | 1 |
biliary bud | 9.82e-10 | 1 |
hepatic duct | 9.82e-10 | 1 |
intestine | 3.71e-09 | 31 |
gut epithelium | 8.02e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.