FFCP PHASE1:Mm9::chr10:79076898..79076938,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=237397|HGNC=|MCL_coexpression_id=13|UniProt=Q5HZI2|association_with_transcript=-128bp_to_NM_001168624,uc007fzc.1_5end|description=CAGE_peak_2_at_C2cd4c_5end|id=chr10:79076898..79076938,-|ontology_enrichment_celltype=CL:0000117!2.48e-12!23;CL:0000337!2.48e-12!23;CL:0000540!6.88e-11!33;CL:0000047!6.88e-11!33;CL:0000031!6.88e-11!33;CL:0000404!6.88e-11!33;CL:0000393!1.11e-09!39;CL:0000211!1.11e-09!39;CL:0000221!3.77e-08!44;CL:0000133!3.77e-08!44;CL:0002319!3.97e-08!43;CL:0000055!4.18e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-25,23;CL:0000337,1.15e-25,23;CL:0000540,9.38e-17,33;CL:0000047,9.38e-17,33;CL:0000031,9.38e-17,33;CL:0000404,9.38e-17,33;CL:0000393,1.31e-13,39;CL:0000211,1.31e-13,39;CL:0002319,5.30e-12,43;CL:0000221,1.20e-11,44;CL:0000133,1.20e-11,44;CL:0002614,5.12e-09,3;CL:0002613,2.00e-08,3;CL:0002612,2.52e-08,3;CL:0002610,3.17e-08,3;CL:0000120,3.56e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.67e-22!73;UBERON:0005743!2.67e-22!73;UBERON:0000073!1.39e-21!75;UBERON:0001016!1.39e-21!75;UBERON:0004121!2.95e-19!102;UBERON:0000924!2.95e-19!102;UBERON:0006601!2.95e-19!102;UBERON:0001049!8.43e-19!52;UBERON:0005068!8.43e-19!52;UBERON:0006241!8.43e-19!52;UBERON:0007135!8.43e-19!52;UBERON:0002346!3.21e-18!71;UBERON:0003075!3.21e-18!71;UBERON:0007284!3.21e-18!71;UBERON:0000955!1.80e-17!50;UBERON:0006238!1.80e-17!50;UBERON:0002616!7.13e-17!49;UBERON:0000033!4.30e-16!63;UBERON:0002020!4.93e-15!34;UBERON:0003080!2.34e-13!40;UBERON:0003056!8.08e-13!49;UBERON:0002780!1.17e-12!39;UBERON:0001890!1.17e-12!39;UBERON:0006240!1.17e-12!39;UBERON:0002791!1.17e-11!29;UBERON:0003528!1.17e-11!29;UBERON:0001893!1.17e-11!29;UBERON:0002420!1.87e-07!8;UBERON:0007245!1.87e-07!8;UBERON:0010009!1.87e-07!8;UBERON:0010011!1.87e-07!8;UBERON:0000454!1.87e-07!8;UBERON:0007811!7.58e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.73e-37,54;UBERON:0002020,2.02e-32,34;UBERON:0001017,2.56e-32,73;UBERON:0001016,2.78e-31,75;UBERON:0001049,1.23e-30,52;UBERON:0005068,1.23e-30,52;UBERON:0006241,1.23e-30,52;UBERON:0007135,1.23e-30,52;UBERON:0002346,1.07e-25,64;UBERON:0003075,1.07e-25,64;UBERON:0007284,1.07e-25,64;UBERON:0003528,3.25e-25,29;UBERON:0002791,3.25e-25,29;UBERON:0001893,3.25e-25,29;UBERON:0004121,6.04e-25,95;UBERON:0000924,6.04e-25,95;UBERON:0006601,6.04e-25,95;UBERON:0002616,1.23e-24,46;UBERON:0000955,5.32e-24,47;UBERON:0006238,5.32e-24,47;UBERON:0003080,5.78e-24,40;UBERON:0002780,4.23e-22,39;UBERON:0001890,4.23e-22,39;UBERON:0006240,4.23e-22,39;UBERON:0010371,8.94e-22,73;UBERON:0003056,1.46e-20,49;UBERON:0002420,2.89e-20,8;UBERON:0007245,2.89e-20,8;UBERON:0010009,2.89e-20,8;UBERON:0010011,2.89e-20,8;UBERON:0000454,2.89e-20,8;UBERON:0010314,5.19e-16,92;UBERON:0002021,1.29e-15,10;UBERON:0000411,1.29e-15,10;UBERON:0001950,1.29e-15,10;UBERON:0000369,7.47e-13,5;UBERON:0002435,7.47e-13,5;UBERON:0000204,7.47e-13,5;UBERON:0010082,7.47e-13,5;UBERON:0002950,2.16e-11,4;UBERON:0001891,2.16e-11,4;UBERON:0009616,2.16e-11,4;UBERON:0010286,2.16e-11,4;UBERON:0002619,7.80e-11,17;UBERON:0000025,1.02e-10,114;UBERON:0000956,2.28e-10,21;UBERON:0001869,2.28e-10,21;UBERON:0000203,2.28e-10,21;UBERON:0004111,1.27e-09,122;UBERON:0002038,5.12e-09,3;UBERON:0009663,5.12e-09,3;UBERON:0009661,5.12e-09,3;UBERON:0000125,5.12e-09,3;UBERON:0002308,5.12e-09,3;UBERON:0001948,1.53e-08,5;UBERON:0002315,1.53e-08,5;UBERON:0002257,2.52e-08,3;UBERON:0004684,3.17e-08,3;UBERON:0002275,3.17e-08,3;UBERON:0011216,6.13e-08,194;UBERON:0002240,4.08e-07,6;UBERON:0005174,4.08e-07,6;UBERON:0001137,4.08e-07,6;UBERON:0003076,4.55e-07,12;UBERON:0003057,4.55e-07,12|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.405017814995072,0.420649922702764,2.28520787523043,0.883474163806454,0.61245399607477,0.191690942036473,0,3.30347642998166,2.042997409363,1.38245879930619,2.2420668914133,3.29355516968675,1.56274011167028,2.79182999001381,3.93933827022176,2.13917546887534,2.65165726926301,1.70846016958924,2.23679334990361,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.587943535678524,0,0.741584903203122,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,2.54644086988199,2.74500361691176,1.63350657746724,1.56441888173049,2.81287003063364,1.66230435647648,1.78465389374533,0.203678727700633,0.248813941220186,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.2562274405697,1.03071897015702,0,0,0.378212160335639,0,0.657587197282725,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.841159794256509,1.85228302282712,0.330418782983798,0,0,0,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0.906970670894253,0.565815239267694,0,0.614870295887855,0,0,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0.608929898229199,0.23467170806371,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0.387479470433193,0.506868376472335,0.821500670520278,0.39061315453185,0.943734099831398,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0,0,2.25900737046827,0.920650473014354,0,2.06223818812425,2.05524755931193,3.0215755895588,2.70009000092722,3.15224842256954,1.35942722695261,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0.628839487883947,0.735374033800057,0.222246727801615,0.824140228955577,0,0,1.01391719956096,0.565879024158229,0.37456602987953,0.512201219238954,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0,0.685738504770831,0,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.492522411877817,0,0.309873682371932,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.382576664137687,0,0|short_description=p2@C2cd4c}} | ||
|EntrezGene=237397 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q5HZI2 | |||
|association_with_transcript=-128bp_to_NM_001168624,uc007fzc.1_5end | |||
|description=CAGE_peak_2_at_C2cd4c_5end | |||
|id=chr10:79076898..79076938,- | |||
|ontology_enrichment_celltype=CL:0000117!2.48e-12!23;CL:0000337!2.48e-12!23;CL:0000540!6.88e-11!33;CL:0000047!6.88e-11!33;CL:0000031!6.88e-11!33;CL:0000404!6.88e-11!33;CL:0000393!1.11e-09!39;CL:0000211!1.11e-09!39;CL:0000221!3.77e-08!44;CL:0000133!3.77e-08!44;CL:0002319!3.97e-08!43;CL:0000055!4.18e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-25,23;CL:0000337,1.15e-25,23;CL:0000540,9.38e-17,33;CL:0000047,9.38e-17,33;CL:0000031,9.38e-17,33;CL:0000404,9.38e-17,33;CL:0000393,1.31e-13,39;CL:0000211,1.31e-13,39;CL:0002319,5.30e-12,43;CL:0000221,1.20e-11,44;CL:0000133,1.20e-11,44;CL:0002614,5.12e-09,3;CL:0002613,2.00e-08,3;CL:0002612,2.52e-08,3;CL:0002610,3.17e-08,3;CL:0000120,3.56e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.67e-22!73;UBERON:0005743!2.67e-22!73;UBERON:0000073!1.39e-21!75;UBERON:0001016!1.39e-21!75;UBERON:0004121!2.95e-19!102;UBERON:0000924!2.95e-19!102;UBERON:0006601!2.95e-19!102;UBERON:0001049!8.43e-19!52;UBERON:0005068!8.43e-19!52;UBERON:0006241!8.43e-19!52;UBERON:0007135!8.43e-19!52;UBERON:0002346!3.21e-18!71;UBERON:0003075!3.21e-18!71;UBERON:0007284!3.21e-18!71;UBERON:0000955!1.80e-17!50;UBERON:0006238!1.80e-17!50;UBERON:0002616!7.13e-17!49;UBERON:0000033!4.30e-16!63;UBERON:0002020!4.93e-15!34;UBERON:0003080!2.34e-13!40;UBERON:0003056!8.08e-13!49;UBERON:0002780!1.17e-12!39;UBERON:0001890!1.17e-12!39;UBERON:0006240!1.17e-12!39;UBERON:0002791!1.17e-11!29;UBERON:0003528!1.17e-11!29;UBERON:0001893!1.17e-11!29;UBERON:0002420!1.87e-07!8;UBERON:0007245!1.87e-07!8;UBERON:0010009!1.87e-07!8;UBERON:0010011!1.87e-07!8;UBERON:0000454!1.87e-07!8;UBERON:0007811!7.58e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.73e-37,54;UBERON:0002020,2.02e-32,34;UBERON:0001017,2.56e-32,73;UBERON:0001016,2.78e-31,75;UBERON:0001049,1.23e-30,52;UBERON:0005068,1.23e-30,52;UBERON:0006241,1.23e-30,52;UBERON:0007135,1.23e-30,52;UBERON:0002346,1.07e-25,64;UBERON:0003075,1.07e-25,64;UBERON:0007284,1.07e-25,64;UBERON:0003528,3.25e-25,29;UBERON:0002791,3.25e-25,29;UBERON:0001893,3.25e-25,29;UBERON:0004121,6.04e-25,95;UBERON:0000924,6.04e-25,95;UBERON:0006601,6.04e-25,95;UBERON:0002616,1.23e-24,46;UBERON:0000955,5.32e-24,47;UBERON:0006238,5.32e-24,47;UBERON:0003080,5.78e-24,40;UBERON:0002780,4.23e-22,39;UBERON:0001890,4.23e-22,39;UBERON:0006240,4.23e-22,39;UBERON:0010371,8.94e-22,73;UBERON:0003056,1.46e-20,49;UBERON:0002420,2.89e-20,8;UBERON:0007245,2.89e-20,8;UBERON:0010009,2.89e-20,8;UBERON:0010011,2.89e-20,8;UBERON:0000454,2.89e-20,8;UBERON:0010314,5.19e-16,92;UBERON:0002021,1.29e-15,10;UBERON:0000411,1.29e-15,10;UBERON:0001950,1.29e-15,10;UBERON:0000369,7.47e-13,5;UBERON:0002435,7.47e-13,5;UBERON:0000204,7.47e-13,5;UBERON:0010082,7.47e-13,5;UBERON:0002950,2.16e-11,4;UBERON:0001891,2.16e-11,4;UBERON:0009616,2.16e-11,4;UBERON:0010286,2.16e-11,4;UBERON:0002619,7.80e-11,17;UBERON:0000025,1.02e-10,114;UBERON:0000956,2.28e-10,21;UBERON:0001869,2.28e-10,21;UBERON:0000203,2.28e-10,21;UBERON:0004111,1.27e-09,122;UBERON:0002038,5.12e-09,3;UBERON:0009663,5.12e-09,3;UBERON:0009661,5.12e-09,3;UBERON:0000125,5.12e-09,3;UBERON:0002308,5.12e-09,3;UBERON:0001948,1.53e-08,5;UBERON:0002315,1.53e-08,5;UBERON:0002257,2.52e-08,3;UBERON:0004684,3.17e-08,3;UBERON:0002275,3.17e-08,3;UBERON:0011216,6.13e-08,194;UBERON:0002240,4.08e-07,6;UBERON:0005174,4.08e-07,6;UBERON:0001137,4.08e-07,6;UBERON:0003076,4.55e-07,12;UBERON:0003057,4.55e-07,12 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.405017814995072,0.420649922702764,2.28520787523043,0.883474163806454,0.61245399607477,0.191690942036473,0,3.30347642998166,2.042997409363,1.38245879930619,2.2420668914133,3.29355516968675,1.56274011167028,2.79182999001381,3.93933827022176,2.13917546887534,2.65165726926301,1.70846016958924,2.23679334990361,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.587943535678524,0,0.741584903203122,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,2.54644086988199,2.74500361691176,1.63350657746724,1.56441888173049,2.81287003063364,1.66230435647648,1.78465389374533,0.203678727700633,0.248813941220186,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.2562274405697,1.03071897015702,0,0,0.378212160335639,0,0.657587197282725,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.841159794256509,1.85228302282712,0.330418782983798,0,0,0,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0.906970670894253,0.565815239267694,0,0.614870295887855,0,0,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0.608929898229199,0.23467170806371,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0.387479470433193,0.506868376472335,0.821500670520278,0.39061315453185,0.943734099831398,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0,0,2.25900737046827,0.920650473014354,0,2.06223818812425,2.05524755931193,3.0215755895588,2.70009000092722,3.15224842256954,1.35942722695261,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0.628839487883947,0.735374033800057,0.222246727801615,0.824140228955577,0,0,1.01391719956096,0.565879024158229,0.37456602987953,0.512201219238954,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0,0.685738504770831,0,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.492522411877817,0,0.309873682371932,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p2@C2cd4c | |||
}} |
Revision as of 17:30, 12 September 2013
Short description: | p2@C2cd4c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C2cd4c_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -128bp_to_NM_001168624, uc007fzc.1_5end |
EntrezGene: | C2cd4c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-25 | 23 |
neuron | 9.38e-17 | 33 |
neuronal stem cell | 9.38e-17 | 33 |
neuroblast | 9.38e-17 | 33 |
electrically signaling cell | 9.38e-17 | 33 |
electrically responsive cell | 1.31e-13 | 39 |
electrically active cell | 1.31e-13 | 39 |
neural cell | 5.30e-12 | 43 |
ectodermal cell | 1.20e-11 | 44 |
neurectodermal cell | 1.20e-11 | 44 |
neuron of the substantia nigra | 5.12e-09 | 3 |
striatum neuron | 2.00e-08 | 3 |
neuron of the ventral spinal cord | 2.52e-08 | 3 |
raphe nuclei neuron | 3.17e-08 | 3 |
granule cell | 3.56e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.